Styela clava (leathery sea squirt): 120338515
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Entry
120338515 CDS
T07291
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120338515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sclv04121
]
120338515
Enzymes [BR:
sclv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120338515
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
HECT type E3
120338515
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
WWE_5
AAA_24
Motif
Other DBs
NCBI-GeneID:
120338515
NCBI-ProteinID:
XP_039262468
LinkDB
All DBs
Position
Unknown
AA seq
1776 aa
AA seq
DB search
MRKSKISREAGNASKCEGDNDGAETSKSAEDSALEAGGATSSNAMATLSNNDSESEDSDV
NRLQALLEARGLPPHFLGNLGPRMQQILHRSMGSGMNSKAQQYLQGLQAVGDESRQLQAA
IGMCQLLVMGNEDTLAGFPIKSVVPALINLLKMEHNFDLMNHACRGLTYMMEALPRSSAV
VVDAIPVLLEKLQVIQCMDVAEQSLTALDMLSHRHAPAILAAGGQSACLLYIDFFSLPAQ
RSALSVAANCSSAIGTLSPDNPSPKEEFQRLVKSCLPLLSSRLTHHDKKCVESVCLCFVR
LIDNYQYEPDILSEIAENDLLKNLQQLLVISPPVLSSNTFVMVIRSMTVLCRNVRSLVVE
LIRGNIAETLSYLLCGTPSEGRNGIVELLSRSSQELFEITTLITHLLPKLPMDDPLFAIN
SLTCKDNSDFSGNTQLNGVSWQWKDGTGQWQSYTKHAIRMLESAYAAGEHEVNLNTLDSS
YTIDFEIMQQINDDTGTSRFVQRVPVRVAYNSSHGSLASQNSKKSDMEWNDIERDMSEFG
RFVKTIFVIIYEVYCSSAGSPAVRQSCLHAMQKMVFFSKPELLIEVLRDLTLSSQISSML
SSFDIKLIVSALQLSEMIMQKLPDIFRDMFCKEGVVHQVKQLTDPSHPLVGTATDISKTS
GAISNSKDGACGVNLATKKSPNSMSGKKSSTSSDDVSPPLTKAKAFAAAMSGKDNGASGG
GGAKKKSSTRSSRSSRSSTSSFLSNFNPSKWGKSLSSALGHDSSESSASKSSGKTSFSSK
MAQNSSSGSEAGSSNKSDADMKQVRQWIVNQAKKFLEYFKTRDDSNPQTNVLDQLTDIAK
NLSDPAKDVLESLKQLCDISSLEVSPFELQHSGIVTSLLRFFTVPSSVNETPNCDYDELH
IRIRKFLSVFAGLPEESMLPIGRTISHIDDTQTEPLLNMVRKLNQCVGQMEQFPVKSRDL
MSGSSQILHVLSTKQLKCQLQRHPASRSIKQWLGGPVKVDPLVQVHAIERYLVTRGYGVK
SSNISLGEPAKHMHLSQVDDQEDDSDDDMQNTVNDFDLDAHSEDFMSTPPESRLSSAASN
SASSSMDDFGDIASGRARKPPDVMHKLAFYIGDHKVPHHITVYQALQQYGQASSNGLSGD
ERDRGFRALEKASFWNKTHIIMYRLASENDENSNSSHKEKTSIKKQRGSKQGRSTGTKSK
VNDPVWSNGIVMPPRNPLHQYLTKELPLEFSTSDPCKEVLCLLRIIHAIVRFWYYLYSPY
VVHTDKALVQPSDFVNFKVNAKCQHQLQDPLVVITGQLSTWVQEIGNVCPFLLAFEVRQL
LFKVSALGRDRALQHLLETGAAQEFSTALNMSSHSSDNSNRLSRFMPRIEKKKCSVSRKN
LLQQAEKIISDHGHSRAMIEVDYEEEVGTGLGPTLEFFTLTSKELQGCSLGLWRDELPAG
EALSDDDDVSDPSKDTSIKKYVATNVGLFPKPLGRAAKHNQVSRIKSKYRFIGKFLAKAL
LDGRLVDLPLSTTCYKWLLGKEHCFTSLDLMYVDTSLASSHGQFRVVAQEREHCFSDHEK
LEQLSMDGCPIEDIGLDMRLPGYPNVELLKMGKNTSVTPHNFDKYLDLITHWTLHEGVKH
QMDALREGFNSVLPISCLNYFYPEELDQLFCGCRYQPWDVNELSEACHPDHGYTQNSVTV
KSLYKILSSYTASEQQNFLQFVTGCPHLPVGGLRVLNPRLTIVRKTCEDAKNIDDYLPSV
MTCLNYLKLPEYSSEEVMRKKLKTAIKEGQKSFLLS
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaatcaaagatttcacgagaagcgggcaatgcgagtaaatgtgaaggagataat
gacggagcggaaacatctaaatcggcagaggattctgcattagaagctggtggtgccact
tcaagtaatgctatggctacattatcgaacaatgatagtgaatcggaagattctgacgtc
aatcgactgcaagcactgcttgaagctcgtggacttccaccacactttcttggcaattta
ggacccagaatgcaacaaatcctgcaccgttccatgggatctggcatgaattcaaaagca
caacaatatttgcaaggtttgcaagcagtgggggatgagtctcgtcaactccaagctgcg
attggtatgtgtcagttgttggtcatgggaaatgaagacacactcgctggcttcccaatc
aagagtgttgtacctgctcttattaatctgttaaaaatggaacacaatttcgatctgatg
aatcatgcttgtcgtggtctcacctacatgatggaagcactaccacgttcttctgctgtc
gtagtagacgcaataccggttcttcttgaaaagcttcaagtaatacaatgtatggatgtt
gcggaacagtctttaacagctttggatatgctctctcatcgtcatgctccagcaattttg
gcagccggtggacagtcagcttgtctgctgtacatagattttttttcgttgcctgcacaa
agatcagccctctctgtagctgctaattgtagctcagcaattggaactctttctcctgac
aatcctagcccaaaagaggaatttcagagacttgtgaaaagttgtttgcctttgttgtct
agtcgtctcactcaccatgataaaaaatgtgtcgaaagtgtctgtctttgttttgtacgt
ttaatagacaattaccaatatgaaccggatatattatccgagatcgcggaaaacgatttg
ctcaaaaatttacaacaattactcgtcatttctccacctgtactaagcagcaatacattt
gtgatggtgatacgtagcatgactgtgctttgccgtaatgttcgttcactcgttgttgaa
ctgattcgaggcaatatcgcagaaactttaagctatttactatgtggcacaccctcagaa
ggaagaaatggaatagtggaattactctcacgaagctcacaagaattatttgaaatcact
acattaataacacacttgcttccaaagttgccaatggacgatccactttttgctataaat
agtttaacctgtaaagataattctgatttttctggaaatacacaattgaatggagtaagc
tggcaatggaaggatggcacggggcaatggcagtcatatacgaaacacgcaatacgaatg
ttggaatccgcgtatgccgctggtgaacatgaagtaaatctcaataccctggactcgtct
tatacaatcgattttgagataatgcaacaaattaacgacgatacaggaacctctcgtttt
gttcaacgagtccctgtcagagttgcttacaattcttctcatggatctctagcaagtcaa
aattcaaaaaaatcagacatggaatggaacgatattgaaagagacatgtcagaatttggt
cgatttgtcaaaactatttttgtaatcatttatgaagtatattgttcatcagcaggatct
ccagctgtaagacaaagctgtctacatgccatgcaaaaaatggttttcttttcaaagcct
gaattattgattgaagtattacgcgatctaacattgtctagtcaaatctcttcaatgctt
tcaagttttgatatcaaactcattgtcagtgcactacaattatcagaaatgattatgcag
aaattgcctgatattttcagagatatgttttgtaaggaaggggtggtccaccaggttaaa
caactgactgatccctctcacccattggtaggcaccgctacagatataagtaaaacatcc
ggtgcaatttcaaatagtaaagatggagcttgtggagtcaatctggcaacaaaaaagtcg
ccaaattccatgtctggaaaaaagtcatcgacatcatcggatgatgtttctccgccatta
accaaagcaaaagcatttgccgctgccatgtctgggaaagacaatggtgcctctggtggt
gggggtgcgaaaaagaaatcctctactcgttcgtcgagaagttctaggtcatctacgtca
tctttcctgtctaacttcaatccaagtaaatggggaaaatcgttgtcgtctgcacttggt
catgatagtagtgaaagtagtgcatctaaatcatctggtaaaactagtttttcatccaaa
atggcgcaaaattcatcaagtggttcagaagcgggatcttcaaataaaagcgacgccgat
atgaagcaagttcgacagtggatcgtaaaccaagctaagaaatttttggaatacttcaaa
acgagagatgatagtaatccacaaaccaatgttttagatcagttgacagatattgctaaa
aacttgtctgatcctgcaaaagatgttttggaatctcttaaacagttgtgtgatataagt
tccttggaagtatcaccttttgaacttcaacatagcggaattgttacttctctgctgcgg
tttttcactgtgccaagttctgtgaatgaaactcccaactgcgattatgatgagttacat
atcagaattcggaaatttttatctgtgtttgctggcctacctgaagagagtatgctgcct
atcggacgaactatttctcatattgatgatactcaaacagagcctcttctcaatatggtg
cgaaaactgaatcaatgcgttggacagatggaacaatttcctgtcaaaagccgtgattta
atgtccggtagttctcaaatattacatgttctaagcacgaaacagctaaaatgccaattg
caacgtcaccctgcgtctcgtagtattaaacaatggctcggaggtccagtgaaagttgat
ccattagtgcaagttcatgctattgaacgatatttagtcacgagaggatatggcgtaaaa
tcgtcaaatataagtttaggtgaacctgcgaagcatatgcatttatcgcaagttgacgac
caggaggacgactctgatgacgacatgcaaaacactgtcaatgattttgatctcgatgct
cacagtgaggactttatgagcactccacctgagagtagattatcaagtgcagcaagtaac
tcagcatccagcagtatggatgattttggtgacatagcttctggtagagcacgaaaacct
ccagatgttatgcataagttagcattctatattggagaccataaagttcctcatcatatt
actgtgtatcaagcgttgcaacaatatggccaagcgtcaagtaacggcctatcgggagat
gaaagagaccgtggttttagagctttggaaaaggcaagtttctggaataaaacccacatt
attatgtacaggcttgcaagtgagaatgacgaaaattcaaacagtagtcataaagagaaa
acttcgattaaaaaacaacgtggttcgaaacaaggacgaagtaccggtacaaaaagcaaa
gttaatgatcctgtctggtcaaatggaattgttatgcctccaagaaatcctttacaccag
tatctaacgaaggaacttccgctggagttctctacatctgatccatgcaaagaagtacta
tgcttacttcgcattattcacgctattgtcaggttttggtattacttgtattctccttat
gtagtacatacagataaagctttggtacaaccaagtgatttcgtcaattttaaagtcaat
gctaaatgtcaacatcagctgcaggatcctttagttgttatcactggccaattaagcaca
tgggtacaagaaatcggaaatgtttgtccgttcttattagcgttcgaagttcgacaattg
ctttttaaggtttcagctttgggaagagatcgggcattacaacatcttttggaaacggga
gctgcgcaagaattctccactgctttgaatatgtcgtcgcattccagtgataatagtaat
agattgagtcgttttatgccacgaattgaaaaaaagaaatgttccgtatcaaggaaaaat
ttactccagcaagcggaaaaaattatttctgatcatggacattcaagagcaatgattgaa
gtcgattatgaagaggaggttggtactggtcttggtcccacacttgagttcttcactctt
acaagtaaagagttacagggctgttcactcggtctgtggagagacgagcttccagctggt
gaagctctgtcagatgatgatgatgtttcggatccctcgaaagatacttctatcaaaaag
tacgttgctacgaatgttgggctattccctaagcctcttggccgagctgccaaacacaac
caagtttcacgaataaaatcaaaatatcgttttatcggtaaatttttagcgaaagctctc
ttggatggaaggctcgttgatctacctttaagtacaacctgctacaaatggttgttgggt
aaagagcactgcttcacaagtttagatttgatgtatgtggatacctctcttgcttcctct
catggtcagtttcgtgtggttgcacaggaacgtgaacattgtttttctgatcacgaaaaa
ctggaacaattatccatggatggatgccccattgaagatattggattggacatgcgcttg
ccgggttatccaaatgtcgaacttctcaaaatggggaaaaacacttcagttactccacac
aattttgataaatatctcgatcttattacacactggacattacatgaaggcgttaaacat
caaatggatgctttgagagaaggttttaactccgttcttcccatctcatgtttaaactat
ttttatccagaagaactcgaccaacttttctgtggatgcaggtatcaaccatgggacgtc
aatgagctgagcgaggcttgccaccctgaccacggttatactcaaaatagcgtaactgta
aagtctttgtataaaattctttcttcgtacactgcttcagaacaacaaaactttttgcag
ttcgttacaggttgtccacatctacctgttggaggacttcgcgttcttaatccaagatta
accattgttcgaaaaacatgtgaagacgctaaaaacattgacgattatttgccttctgtt
atgacatgcttgaattatcttaaactgcctgaatactccagtgaggaagttatgagaaaa
aaattaaaaactgcaataaaagaaggccaaaaatcatttttgctttcatag
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integrated database retrieval system
