Styela clava (leathery sea squirt): 120338740
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Entry
120338740 CDS
T07291
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120338740
Membrane trafficking [BR:
sclv04131
]
Protein recycling
Others
EARP complex
120338740
Endosome - Golgi transport
Tethering complex
GARP complex
120338740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
Dor1
COG4_N
Tropomyosin
AAA_13
EzrA
COG5_N
Sec8_N
Laminin_II
VPS51_Exo84_N
Syndetin_C
DUF3450
DUF745
Baculo_PEP_C
Phage_TAC_5
BLOC1S3
DUF6987
MreB-like_C
Filament
Exonuc_VII_L
CENP-F_leu_zip
ATG16
DUF4715
Motif
Other DBs
NCBI-GeneID:
120338740
NCBI-ProteinID:
XP_039262608
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MAELDADDPTEELYPKEVQELLETIVQSDDPLQHANFDVIDYINKLFPTEQSLSNIDDVV
GNIESQIQDLDEDIRHAIHAQTHAVVEGEEALEEAQKSIQDLFVMIKNIKDRAEQSEETV
KEITRDIKQLDTAKRNLTSSITTLNHLHMLTGGVETLVGLSQKRRYGEAASLLEGVLNVL
EHFKNYHSIPAVKDLVNKVDDIKSTLTQQIFADFEHAFENKSGGRPNVNIALLSEACLVA
NALGGNVKNELIKKFVKSQLAEYNVLFEASQDCAWLDKIDRRYAWIKRALMDFEERYVKL
FPQNWEVSECIAVQFCYITNRELGNIMKTRSNEIDVKLLLFAIQRTTNFETLLSKRLSGI
TLKENKTITKLTTKEPVDIDPSNPFYEEVVKEMNSEAEENPKESKPADPPSKIENPFMGL
ISKCFESHLDVYIQSQDRNLAELISKFQQDFQEHQAQAKQSIVAGAAMQCEVLPTCADLF
VYYKKCMVQCSQLSTGEPMVSLTHLFQKYLREYATKLLSNNLPKLSAAPTSSVSMPGNIT
FSSVTNLIKETTSSLKEGSSPETHKLNTQELCVTCSMLCTADYCLETTQQLQEKLRQKVD
TDLVKKVDLSGECDTFSTVVTSCIQLLVHDLIASCDPAFYAMSKVSWMSVEQVGDQSSYV
TAITSHVKQSVPQIRDNLSSVRKYFTQFCMKFANNFIPRFVSSLYKCKPIGTVGTEQLLL
DAHSLKTLLLDLPSIGSQISRKAPSSYTKIVIKGMTKAEMLLKVVMYPHDPADAFVANYS
RLLSSAEADTFQKVLEMKGLKRSEQAPLLEIFWRKQPVPTDTTTLPQGGATNSHVASSIL
GSLADLDSNSRIRKLEKLIKKRL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcggaattggatgcagatgatccgactgaggagttatatccaaaagaagttcaagaa
ttgcttgaaacgattgttcagagtgatgatccacttcaacatgctaattttgacgtcatt
gattatatcaataaattatttcccactgagcaatctttgtcgaacattgatgatgttgtt
ggaaatatcgagagtcaaattcaagatcttgatgaagacatacgacatgcaattcacgca
caaactcatgctgttgtagaaggtgaggaagcgttagaagaagcacaaaaatcaattcaa
gatcttttcgttatgataaaaaacataaaggatcgcgcagaacagtctgaagaaactgtt
aaagaaataacaagagatataaagcaattggacactgcgaaacgtaatttaactagttca
ataacaacgttgaatcatttgcacatgctgacaggcggtgtggaaactctagtcggctta
tcacaaaaacgacggtacggagaagccgctagtcttcttgaaggtgttctaaatgtgctg
gaacattttaaaaattatcattctattcctgctgtcaaagatcttgtaaacaaggtagat
gatatcaaatctactttgactcagcaaatatttgcggattttgaacatgcttttgaaaat
aaatctggtggtagacctaatgttaatatagctctgttgagcgaagcctgcctagttgcc
aatgcacttggaggtaatgtgaaaaatgaacttatcaaaaagtttgtgaaaagtcagttg
gcagagtataatgttctatttgaggcttctcaagattgtgcctggcttgataagatcgat
cgcagatatgcatggataaaacgtgctttgatggattttgaagaaagatatgtgaaacta
ttcccacagaactgggaggtatcggaatgcattgcagttcagttttgctacataacaaac
cgagagcttggtaatatcatgaaaactagatccaatgaaattgacgtcaaattacttctt
tttgccattcaacgaacaacaaattttgaaactttgctgagtaagcggctttcgggaatt
acattgaaggaaaataaaacaattaccaagctaacaacaaaagaacctgtggatatagat
ccatccaatccattttatgaagaggtggtgaaagaaatgaacagtgaagctgaagagaat
cccaaagaatcaaaacctgctgatccaccttcaaaaatagaaaatccgttcatgggtttg
atatcaaaatgctttgaatcacatcttgatgtctatattcagtctcaggaccgtaaccta
gctgagctcatttccaaatttcagcaggatttccaagaacatcaagcccaagcaaaacag
tcgattgtggctggtgctgctatgcaatgtgaagtcttgcccacatgtgcagatttattt
gtttattataaaaaatgcatggtacaatgttctcaattaagcacaggtgaaccaatggtt
tctttgacacatctttttcaaaaatatctgagagaatatgctacaaaactgctttcaaac
aacttgccaaagttatcagctgctcctacttcaagcgtcagtatgccagggaatatcaca
ttctcttcagtcacaaatttaatcaaagagacaacatccagtctaaaagaagggtcgtct
cctgaaactcataagttaaacactcaagagttgtgtgtaacctgttctatgttgtgcact
gcggattattgtcttgaaacgactcaacaactgcaagaaaaattacgacaaaaagtggat
accgatctcgttaaaaaagtagatttatcaggtgaatgtgacacgttcagcactgttgtt
acaagttgcattcagttattagtgcatgatcttattgcatcgtgtgaccccgctttctat
gcgatgtcaaaagtatcgtggatgtctgtggagcaagtcggtgatcagagtagttatgtc
acggcaattacgtctcatgtgaagcaatccgttccacagattcgtgataacctttcatct
gtaagaaaatatttcacgcaattttgcatgaagtttgcaaataatttcatacctcgattt
gttagttctttatacaaatgtaagcctattggaacagttggaacagagcaattacttctt
gatgctcattctttaaaaacacttttacttgatttgccttcaattggatctcaaattagc
agaaaagcaccttcatcgtatacaaaaattgtaatcaaaggaatgacaaaggcagaaatg
cttctcaaagtggtgatgtatccacatgatccagcagatgcatttgtagctaactatagc
agactgttatcttctgcagaagccgataccttccagaaagttttagaaatgaaggggtta
aaacgttcagaacaagctcccttgttggaaatattctggcgaaaacaacctgttcctact
gatactactactctaccacaaggtggtgctacaaattcacatgttgcttcttcaattctt
ggaagtttagccgatctggattcaaattcgagaatcagaaagttggagaagttaatcaag
aagagattgtaa
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