KEGG   Styela clava (leathery sea squirt): 120338757
Entry
120338757         CDS       T07291                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
sclv  Styela clava (leathery sea squirt)
Pathway
sclv03020  RNA polymerase
sclv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sclv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120338757
  09124 Replication and repair
   03420 Nucleotide excision repair
    120338757
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sclv03021]
    120338757
   03400 DNA repair and recombination proteins [BR:sclv03400]
    120338757
Transcription machinery [BR:sclv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     120338757
DNA repair and recombination proteins [BR:sclv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      120338757
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Ogr_Delta Zn_ribbon_recom DUF7838 Cas12f1-like_TNB Zn_ribbon_NrdR
Other DBs
NCBI-GeneID: 120338757
NCBI-ProteinID: XP_039262629
LinkDB
Position
Unknown
AA seq 127 aa
MQEHVNQKGPGFVGIKFCQECNNMLYPKEDKQNRILLYSCRNCDFQMEADNACIYVNKIV
HEVDELTQIIADVAQDPTLPRTKDHSCPKCQHKEAVFFQSQSTRAEEGMRLYFVCTNPQC
GHRWTQL
NT seq 384 nt   +upstreamnt  +downstreamnt
atgcaagagcacgttaaccaaaaaggacctggttttgttggaatcaaattttgtcaagaa
tgcaacaacatgctctatccaaaagaagacaagcagaacagaattctactctactcatgt
cgtaactgtgactttcaaatggaagctgacaatgcatgtatttatgtaaataagattgtc
catgaagttgatgaattaacacaaatcattgctgatgtagcacaagatccaactttgcca
cgaacaaaagatcattcttgtcccaaatgtcagcataaagaagctgtattcttccaatct
caatcaacaagagcagaggaaggcatgagactttattttgtttgcacaaacccacaatgt
ggtcatcgatggactcaattgtaa

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