Styela clava (leathery sea squirt): 120338930
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Entry
120338930 CDS
T07291
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like
KO
K03267
peptide chain release factor subunit 3
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120338930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120338930
03012 Translation factors [BR:
sclv03012
]
120338930
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
120338930
Translation factors [BR:
sclv03012
]
Eukaryotic type
Release factors
120338930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
TreT_GT1
Cob_adeno_trans
G-alpha
Motif
Other DBs
NCBI-GeneID:
120338930
NCBI-ProteinID:
XP_039262875
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MNIYCSFSDAIYFGNSVYKLKNLHLNKLPLKKMNGENIPDSWDQEVANNLASLNVNARPF
VPNVGAAEFIPSFLKSPQPAVPSAQPTKPMTQQEDLPSQGAVGGEQLAQNIEPSSVGDTP
SMNEEAPLPEADYVPNAKPAAENWEDTAQNEEVKVEDENEEVELKEEEEDIVEVKKPRPA
SETEVKKDHLNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSW
VVDTNQEERDKGKTVEVGRAYFETENKHFTILDAPGHRSFVPNMIGGASQADVAVLVISA
RRGEFETGFERGGQTREHAMLAKTAGVKYLIVLINKMDDSTVRWSIDRYNECKEGLTPFL
KKIGFNPKTVHYMPCSGLTGANLLTSDGNHKEWYNGLPLIPYLDQLPTMHRSGKGPIRLP
IVDKYKDMGTIVLGKLESGTLTKGMHVIMQPNKRRVKVLNILSDDVETDEAMAGENCKLR
LDNVDDDEVSKGFVLCSPDNLCSTGCLFDAQIAIIEYKSIICAGYSAILHIHTCIEEVEI
KLLICLLDRKTGEKVKGRPKFVKQDQTVIARLQTSGAICIESFKNFPQMGRFTLRDEGKT
IAIGKVLKVLE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttattgcagtttttcagatgccatatattttggcaactcagtatataaatta
aaaaatttgcatttgaacaaattaccattaaaaaaaatgaatggtgagaatatcccagat
tcgtgggaccaagaggtcgccaacaatctggcatccctgaatgtcaatgcaagaccattt
gtgcctaatgttggtgctgctgagttcataccgtccttcttgaagtcaccacaaccagcc
gtgccttctgctcagcctactaaaccaatgacacagcaggaagatctgccttctcaagga
gctgtcggaggggaacaattagcacaaaatattgaaccatcgtctgttggtgatacacca
tcaatgaatgaagaagctccacttccagaggcagattatgttccaaatgctaagcctgct
gctgaaaattgggaagacactgctcaaaatgaagaggtcaaagttgaagacgaaaacgag
gaagttgaactgaaagaagaggaagaagatatagtagaagtgaaaaaaccacgccctgct
tctgaaactgaagttaagaaagatcatttgaacgttgtatttatcggccatgttgatgct
ggaaagtcaactattggtggccaaattatgtatttaacaggaatggtagacaaaagaaca
cttgaaaaatatgaacgtgaagcaaaagagaagaatcgtgagacgtggtacttatcctgg
gttgttgataccaaccaagaagaacgagataaaggaaagactgtagaggttggacgagca
tattttgaaactgaaaacaaacatttcacaatactagatgcccctggccatagaagcttc
gtccctaacatgattggcggagcttctcaagcagatgttgctgttcttgtcatctcggcc
agaagaggagaatttgagaccggttttgaaagaggtggacagacgagggaacacgctatg
cttgcaaaaactgctggagttaaatatttgattgtgctcatcaataaaatggacgattct
actgttcgttggagtatagataggtacaatgaatgcaaagagggattgactccatttttg
aagaaaattgggttcaatcccaagactgtacattatatgccatgttctggtctgacaggt
gccaacctacttacatcagatggcaatcacaaagaatggtacaatggccttcctcttatt
ccatatctcgatcagttgcctacaatgcacagatcaggcaaaggtccgattcgtctaccg
attgtcgacaagtataaagacatgggaacaatcgtacttggtaaactagaatctggcacc
ttgacaaaaggaatgcatgtcataatgcaaccaaacaagcgaagggtgaaagttttgaat
attttatcggatgacgttgaaacagacgaagcaatggctggtgagaattgcaagttgaga
cttgacaacgtagatgatgatgaagtttcgaagggatttgttctatgttcaccagacaat
ctatgttcaactggatgtttatttgatgctcagattgctattattgaatataaatctatt
atttgtgcaggatatagtgctatactacatattcatacgtgcattgaagaagtagaaatt
aaactgctgatttgtttattggacagaaaaactggggaaaaagtgaaaggaaggcctaaa
tttgttaaacaggatcaaactgtcatcgcacgcttacaaacatcaggagccatatgcatt
gaaagtttcaagaacttccctcaaatgggtcgttttactctgcgtgatgaagggaaaacc
atcgccattggcaaggtcctcaaagtgctcgaatga
DBGET
integrated database retrieval system
