Styela clava (leathery sea squirt): 120338995
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Entry
120338995 CDS
T07291
Name
(RefSeq) zinc finger BED domain-containing protein 6-like isoform X1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120338995
04121 Ubiquitin system [BR:
sclv04121
]
120338995
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120338995
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120338995
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
DUF659
Motif
Other DBs
NCBI-GeneID:
120338995
NCBI-ProteinID:
XP_039262960
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MRLTCCSFNSRTSSVQQSSLTAYFKPITKGQCETIDRLITEVIVGDLRPINLVEGQHFRS
LIHHLQPGYVLPGRNTVTKHIERRYKECKEKLINIIGAIKEKSVSLTTDMWTSARMQAYI
TVTAHFVDPSDGQLLKYVLTTEQMDEAQTAENIKSEILKSLSEFDISPTKVLSVTTDNGA
NVVSACRSLYEEYGWYHIRCAAHTIQLCIKDGLKIEEISHALAGARHLVQYFRRSTKAMT
TLRHRHAQDGTSPSIEMPIDVSTRWNSTYVMIKNLISHQWTIRSVLCDPTITPRTAASHL
ELGETTWNMLTVLAEILEPFKAASDHLEGDYVTVSSLIPLTKGLLGHCEEKRNEGGTLSA
ITNEFCNTLINSLKLRFRSILETPSQEEVNLFQKATWLHPCHKGKFFDRSFRVQVRVSLE
MEATEASMPEIQDEIHVEPSAVTAPEVEQNSLQGLFSIGIEQSSSSESEGYASKVSEEIS
QYLKEKLDRNTERLNPLLWWHARKTDSPSLHKMAIRYLAIPCTSAPAERAFSSAGLTVSR
LRTRLSGTHVNELNFLHCNRSLMQQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaggttaacctgttgttcttttaattccagaacttcttcagttcagcaaagcagcttg
actgcctatttcaagccaataactaagggtcagtgtgagacaatagatagattgataact
gaagttattgttggagacctccggccaataaaccttgttgagggacagcattttcgttca
ctgatacatcacttacagccaggctatgtattacccgggcgtaacactgtaactaaacat
attgaaaggaggtataaagaatgtaaagaaaagcttattaacataataggggccataaaa
gaaaaatctgtctcacttacaacagacatgtggaccagtgcaagaatgcaagcatatata
actgtcactgcccatttcgtagatccgagcgatggtcaattactcaagtatgtattgaca
acagaacagatggatgaggctcaaacggcagaaaatataaaatcagaaattttaaaatca
ttgagtgagtttgatatcagcccgacaaaggtgctctcagtgacaacagataatggagca
aatgtggtgtcagcttgtcgttcactttacgaagaatatggttggtaccatattagatgc
gctgcacatacgattcagctctgcatcaaagatggcttaaaaattgaagaaatatctcat
gcattagctggagctcgtcatttggtgcagtactttcgccgatcaacgaaagctatgaca
actttaagacatcgacatgctcaggatggcacatctccttcaatagaaatgccaatcgac
gtatctacaagatggaattccacttatgttatgataaaaaatttgatctctcatcaatgg
actattcgatctgtattatgtgacccaacaattactcctagaacagcagcaagtcacctg
gaattaggtgaaacaacatggaatatgcttacagtgctagcagagattttagaacccttc
aaggctgcctctgaccatcttgaaggtgactatgtaacagtttcctctttgattcctctc
acaaaagggctgttgggccattgtgaggaaaagagaaatgagggtgggacactatcagct
attacgaatgaattttgcaacactctcataaattctctcaaacttcgatttcgttctata
ctggaaacacccagtcaagaagaggtcaacttgttccaaaaagcaacatggctccatcct
tgtcataaagggaaattttttgatcgttctttcagagtccaggtcagagtttctctagaa
atggaagccactgaagcttcaatgccagaaatacaagatgaaatacacgttgaaccttct
gcggttactgctccagaggtggaacaaaattctctccaaggactcttttcgatagggatt
gaacagtcaagctcgtctgaatcggaaggatatgcatctaaagtgtcggaggaaatttca
cagtacttgaaagagaaattggacagaaatacagagcggttaaacccattattgtggtgg
catgcccgaaaaactgattctccatccctacacaaaatggccattcggtacttggctata
ccgtgtacgtcagcaccagcggagagagccttctcttctgctggtttgacagtttccaga
ttaagaaccagactcagtggtacacacgtaaatgagttaaacttcttgcactgcaaccga
agtttgatgcagcagtga
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