Styela clava (leathery sea squirt): 120339017
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Entry
120339017 CDS
T07291
Name
(RefSeq) rab11 family-interacting protein 1-like isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120339017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120339017
Membrane trafficking [BR:
sclv04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
120339017
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RBD-FIP
C2_CAPS
Asp4
Motif
Other DBs
NCBI-GeneID:
120339017
NCBI-ProteinID:
XP_039262991
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MFSPTDICVIVHRAKNLLIKGKGSNDAYATMEFEGEKYATNVVEKSNSPTWNQECQYALP
QGGVLDKLTVTITVYNKQHGKFGLQNDDFIGLIKIPLKDIGINDHKEIRKWYNLEHKNPK
KEKKQRGEVEIGLKFICKDRLSLLPDKKSPKNLRQITSKLGQKLRRRSEDEDSGVGSDSF
SMRKGQSMDNLHRTPSSASDGARNKKRFSIADVNPVASARGLVKLSNRIGLGGNKKATSV
EVLNKPEMRKVASASSLKRSSSGGSSLATLGVRKQHVRNRSMPDSSLLALTERERSASTT
NPVCINGPHIYISGTDSGNNSLTTSAENLNKTGSSENIDFGQYENMDQLHASHNDNFSNS
KSLNTLSTNTITTPSSLSIVYKPKSYYRLDVKELCKVSPIPEDPTATFQQMSREELLKLC
IKQHNVLSSKSEQIRELEDYIDSLLVRVMVCTPQILDRSSKRSGSQRSTKF
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtccgacagacatatgcgtgattgtacatcgtgccaaaaaccttttaataaaa
ggtaaaggcagtaatgatgcttatgctacaatggaatttgagggtgaaaaatatgctact
aatgtagttgaaaaatctaattcacctacgtggaatcaagaatgtcaatatgcactaccc
caaggtggagtgctcgataaactgactgtaacaattacagtttacaacaaacaacatgga
aaatttgggttacaaaatgatgatttcatcggactcatcaaaattcctctcaaagatata
ggcataaatgatcacaaagagattaggaaatggtataatcttgagcacaaaaatccaaag
aaagagaagaaacagaggggagaagtcgaaattggattaaaattcatatgtaaagacagg
ttgagtcttcttccggacaagaaaagtcccaagaatttacgacagataacttcaaaatta
ggacaaaaattacgaagaagatcagaagatgaagattctggtgttggaagcgatagtttt
tctatgagaaaaggccaatctatggataatctacacagaacaccatcaagtgcgagtgac
ggagctcgaaataagaaacgattttcaatcgctgatgttaatccggtagcttcagcaaga
ggattagtgaaattgtcaaatcgaattggtcttggcggtaacaagaaggccacaagtgta
gaagttttaaacaaacctgaaatgagaaaagtagcaagtgcttccagtttaaagagatca
agttctggtggaagttcacttgctacactcggcgttcgaaaacagcacgtgagaaacaga
tccatgcctgattcatctttacttgctctaacagagcgtgaacgctcagcttctacgacc
aaccctgtttgtattaatggtccccatatttatatatcaggaactgattctggtaataac
agtttgacgacgtctgccgaaaatttgaataaaactggatcatcagaaaatattgatttt
ggacaatatgaaaacatggatcaattacatgcatcacacaatgacaacttttcaaattca
aagagcctgaatacattgtcaacaaatacaatcacaacaccatcttctctttcaattgtt
tataaacctaaaagttattataggcttgatgtgaaggaattatgtaaggtttcacctata
ccagaagatccaacagctactttccagcaaatgagcagggaggaattactcaaactttgt
atcaaacagcataacgtactttcaagcaaaagtgaacagattcgagaacttgaagactac
attgactctctactcgttagagtgatggtatgcacaccacaaattctggaccgctcttca
aagaggtctggaagccaaaggtcaacgaaattctaa
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