Styela clava (leathery sea squirt): 120339056
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Entry
120339056 CDS
T07291
Name
(RefSeq) transcriptional regulator ATRX homolog
KO
K10779
transcriptional regulator ATRX
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120339056
03036 Chromosome and associated proteins [BR:
sclv03036
]
120339056
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
120339056
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120339056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ADD_ATRX
ARMET_C
DNMT3_ADD_GATA1-like
Motif
Other DBs
NCBI-GeneID:
120339056
NCBI-ProteinID:
XP_039263032
LinkDB
All DBs
Position
Unknown
AA seq
2078 aa
AA seq
DB search
MSMAEPITVLLPQPAPDDDFHGPEFSRFYGNAENKKKCILCTACGRELLLSMRSKIFKHP
ALEVIVCKICFDFYHAGKFTQDEDGMDEHCKWCGEGGNLIMCDFCTHSFCNYCIKRNFSS
EVFTQIRDAPQWQCFVCDKSQILDKILQCKDVMKKVDTPVEPQVMVTENSQESRDFNTLV
ENNKCLDEIIGPMETHLSPSNVNMNTNQTNEQMKKVDPIKIRKEKENYIVHRSASCSCDE
KSPVKHESRSLSDPESSRQSPCKHSYVKIENIDDKPFFSNLNDISKQDEPMDEENNNGAE
SINELKNNGTDDIEEGLSSEQHNDPTVTIHSCPTTQLDSNIEDDNSTLKKDQNSAINVPS
PSSLPKLRKNVGKRTKPVKNVIRQNSNDANISETRNDVTKNPSKQSTSTFKSKMEEAEEC
LARLARIIKEIAADEISSIGHKVSRSSSLSQYSKFRSTSKLLKKVKSASSKLIRIEHDLR
AHKTKLRKYRSSEDSGNLDSSSDDDSMNNEMNKRKARKKTIGVGSETTENDETPEKMETD
RSVEQEIFEENLNESSGIDPNEENNQPSTFNQPSTSTETSMLMKNPKIVLTKLTENDILK
FHKKVDNNVDDSTTDLDTDSSKNIMRPRVNFNTLTATSIGSDSESNPRPRVNFSLKQKIV
KSGKLRNMQILRDKELKAERKKKKLQLTDDDNDSDSDYQVEDEDFFSDSEYDEDKVDLKG
DDDNEIAMHLLLQKMQEEYDSPDSDVDKLLKENGDIDTKDSNSSEVHETGYNEKINSKTD
EVKEKVKKHNGYKHPLLAKKWKDGSDENDENPKTGNKVNSDASMNTTDKKRKASHESVSS
SKKPRRKLEMAENSDPNLTTDSEPDISRKTRSKQNRKCKRLLSDSDSNSPKPIIIDSGKS
SDSLSDKDDSTDTDEEITDIKKKFHKRRRRLIKQSESDGDPKVVDENTTGSSQKTGRKNI
RKILDDDEVSQSTQQASLEEAQRRKRLKKDREGSKEEEEVTVIDEESQSPVKKLVTVSLT
LSKQPHVEVHRQIVHKLKPHQVQGIQFLWDNIIEKVKDANSKRGSGCILAHCMGLGKSLQ
TVAFLHTVLMSKHLPNLRTALVLCPFGTVNNWVAEFTKWVPNSNKDYEWNAKLKRWIRSV
DYEHKFQKLVVSDLHSVKTDQERIAKLHRWKTEGGILVVGYGLFRTLLNDNKRKTSEVFV
ESLCKPGPDILVCDEGHILKNAMSKIANMVQQVHTKRRIVLTGTPLQNNMVEYHCMVSIV
KPKLLGTIKEFKNRFMNPIENGQHVDSTESDVKLMKKRAHVLHELLAGCLQRKDYTCLRA
HLAPKYEYVLSVRLSDLQIRMYKHYLTLHSSNDAKLRKGGIFKDYNRLTLLICHPRCLVM
STDKKDIKDNQDDLRKFINDEEEGAESEEEDDSSDNSVIMVSDDEIPSSQEIKPKTLEDI
HALSGAKLRLFIESKSGKKPETRNRKKLVTLATKYLDINFCKTAEFEQSLKIKSIQELKA
MIAEHGESIKGCTEKSDLISLLKRVILNENQDEEEWYVKFMPTQEKLAHSISHSGKIMLM
LQILQLSTEVGDKVVIFSQSLLSLDLIEEVLKSETSDVSKGLKSDSGPYSKWLKYKDYYR
IDGSTPANLRDSWISKFNNKNNTRGRLFLISTRAGGIGINLIGANRAIVFDASWNPSHDI
QSIFRIYRFGQTKPCYVYRFIAQGTMEEKIYERQIMKQSLAFRVVDEQQILRHFSAADVN
ELYKFNPAPKPEKSNDEKDNVPKFAPPKDALLAAILKKSELVVTYHDHDSLLDHQVSEEL
TEAERRAAWEEYDNEQQKPVDSSTNPMFESFKVFSPHHLTHFSENANKVLSLIEKKMVQL
SKNSFESILVEIQMKNRTFKPETVSKHATQKKLDDHILLRRLTALKKLVTSYQYESKRCL
AQKRSIAPPPRPTSSSQPRSFLNPVSSANPQINMNGYVPRANAPRRFTPNTIPASTSRQS
TPTTSFSRFTPPSMNTTNMPRHTRYTVPPPRPTVPPKWRMQGNSTYTVPTTAQTRYTNPN
RPRYRPNYSNAQQNYRPSSNVRNAQNFKPRYTVLNPRR
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggctgaacccatcacggtcctgctgcctcaacctgctccagatgatgatttt
cacggaccagaattttccaggttttatggcaatgcagaaaacaaaaaaaaatgtatcttg
tgcactgcatgtgggcgagaattattgctctctatgagaagcaaaatatttaaacatcca
gcattggaagtgattgtatgcaaaatatgttttgatttctaccatgctggaaaattcaca
caagatgaggatggaatggatgaacattgtaaatggtgtggggaagggggaaatttaatt
atgtgcgatttttgtactcattcattttgtaattattgcatcaagcgaaatttttctagt
gaagttttcacacaaatcagagatgctcctcaatggcagtgctttgtgtgtgataagtca
caaattttagacaaaattttacaatgtaaagatgtaatgaaaaaagttgatacgcctgtg
gagccacaagtaatggttaccgaaaatagccaggaaagtagagacttcaatactttagta
gagaacaataaatgcctggatgaaataataggaccaatggaaactcacttgtctccatct
aatgttaatatgaacacgaatcaaacaaatgagcaaatgaaaaaagtagatccaataaaa
attcgcaaagaaaaagaaaattatatagtgcatagatcagcttcctgttcctgcgatgaa
aaatcaccagtcaaacatgaatcaaggtcattgtcagatccagaaagcagtagacaaagt
ccttgtaagcattcctatgttaaaatagaaaacattgatgataaaccatttttttcaaac
cttaatgatatttccaagcaagatgaacccatggatgaagaaaataacaatggtgccgaa
tcaatcaatgagctaaagaacaatggtaccgatgatatagaagagggactgagttctgaa
caacacaatgatcctacagtaacaatacattcatgtcctactacgcaacttgattcaaat
attgaggatgataatagtacattgaagaaagatcaaaattcagccataaatgttccttcg
ccttcaagtcttccaaaacttagaaaaaatgttggtaaaagaactaaaccagtaaaaaat
gtaatccgtcaaaattctaatgatgcaaatatttcagaaactagaaatgatgttacaaaa
aatccgtcgaagcagagtacatcgacatttaaatcaaaaatggaagaagcggaagaatgc
ctggctcgccttgctcggatcataaaagaaattgctgccgatgaaatatcatcaattggt
cataaagtgtctcgctccagctcactttcgcagtattcaaagttcagatcgactagtaaa
cttctgaaaaaagttaagtcagcttcatcaaaattgattcgaattgagcacgaccttaga
gctcacaaaactaaattgaggaaatatcgttccagtgaagattctgggaatttagatagc
tcgtctgatgatgatagcatgaataatgaaatgaacaaacgaaaagcacgcaaaaaaaca
attggagttggtagtgaaaccactgaaaatgacgaaacccctgaaaaaatggaaacagat
agaagtgtggaacaagaaatatttgaggaaaatttgaatgaaagttctggaattgaccca
aacgaagaaaacaatcaaccttcaaccttcaatcagccttcaacctccacagaaacatct
atgttaatgaaaaacccgaaaatagttttaactaaactaacagaaaacgacatattgaaa
tttcataaaaaggttgataacaatgtagacgacagtactactgatttggatactgacagc
tctaaaaatataatgcgtcctcgtgttaatttcaataccctgactgccacttcaattgga
agtgattctgaatccaatcctcggcctcgtgtcaatttttcactcaaacaaaaaatagtc
aaaagtggaaaattacgaaatatgcaaattttaagagacaaagaattaaaagcggaaaga
aaaaaaaagaagttgcaattgacagatgatgacaatgactcggattctgattatcaagtt
gaagatgaagattttttttccgattctgaatatgatgaagataaagtagatttaaaaggt
gatgatgataatgaaattgcaatgcatttgctacttcaaaaaatgcaagaagaatacgat
tcaccagattcagatgttgataagctattgaaagagaatggtgacattgatactaaagat
agcaactcgagtgaggtacatgagactgggtataatgaaaaaataaactcaaagactgat
gaagtgaaagagaaagtaaaaaaacataatggatataagcatccactcttggctaaaaaa
tggaaagacgggtcggacgaaaatgatgaaaatcctaaaactggtaataaagttaattct
gatgccagtatgaatactacagataaaaagagaaaagcttcgcatgagtctgtttcctcc
agtaaaaaaccaagaagaaagttggaaatggctgaaaactctgaccccaatttaacaaca
gattctgagcctgatatttctcgcaaaacaaggtcaaaacaaaataggaaatgtaaaagg
ctgttgtctgacagtgattcaaattctccaaaaccaatcattattgacagtggaaaaagt
agtgacagtttatctgataaagatgatagcactgatactgatgaagagataacagatata
aagaaaaaattccataaacgtagacgccgtttaataaaacagtcagaatcggacggagat
cccaaagtagttgatgaaaacacgacgggtagttcacaaaaaactggcagaaaaaacata
aggaaaattctcgatgatgatgaagttagtcaatcgacacaacaagcctcactggaagaa
gctcagagaagaaaaaggctgaaaaaagatagagaaggaagcaaagaggaggaagaagta
actgttatcgatgaagagagtcaaagtccagttaagaaattagtcacggtaagcctgaca
ttatctaaacaaccccacgttgaagttcatcggcaaattgttcacaagttaaagccacat
caagtacaaggaatacaatttttatgggataatataattgaaaaagtaaaagatgcaaat
tcaaagcgggggagcgggtgcattttagcacattgcatgggcctcggaaaaagtcttcaa
actgttgcgtttcttcacacggtgcttatgagtaaacacttgcctaatctacgtactgca
ttagtcttatgtccattcggaactgtgaataactgggttgcagaatttacaaaatgggtg
ccaaattcaaacaaggattatgaatggaacgcgaaattaaagagatggattcgctcagta
gactatgaacacaagtttcaaaaacttgtagtatcggatcttcactctgttaaaacagat
caagagagaatagcaaagcttcatcgctggaaaacagaaggtggtattctggttgtggga
tatggtctattccgtaccctcctcaacgacaacaaacgtaaaacaagtgaggtttttgtt
gaaagcttatgcaagcctggacctgatattctagtctgtgatgaaggtcatattctgaaa
aatgccatgtcaaagattgccaatatggttcaacaagttcacaccaagcgtagaattgta
cttactggcaccccactgcaaaacaatatggttgaataccattgtatggtcagtatcgta
aaaccaaaattactcgggactataaaagaattcaagaatcgattcatgaatccaatagag
aatggccaacatgtcgattcgactgaatctgatgtaaaattgatgaaaaagcgggctcat
gtattacatgaacttctggcggggtgcttgcaaagaaaagactacacatgtcttcgcgca
catttggcaccaaaatatgaatacgttttaagtgttcgtctttcagatttacagatacga
atgtataaacattatcttactttgcactcatcgaatgatgctaagctaagaaaaggaggc
atatttaaggattacaacagattgacgcttttaatttgtcacccaagatgccttgtaatg
tcaacagataaaaaagatatcaaagataatcaagatgatttgcggaaattcatcaatgat
gaggaggaaggtgcggaaagcgaagaagaagatgattcatctgataattcagtcattatg
gttagcgacgatgaaattccatcatcacaagaaattaagccaaaaacacttgaagatatc
catgcactttctggtgccaaacttcgattgtttattgaaagtaaaagcggaaaaaaaccc
gaaacaagaaacagaaaaaaacttgtaaccttggcaacgaaataccttgatatcaatttc
tgtaaaacagcagaatttgagcaatcgctaaaaattaaatcgattcaagagctaaaagcg
atgatagctgagcatggggaatccatcaagggttgtactgagaaatctgatcttattagc
ctgttaaaacgtgtaatcttaaatgaaaatcaagacgaagaagaatggtatgtcaagttc
atgccgactcaagaaaaattagctcattctatttcacacagcggtaaaattatgctaatg
ttacagatattacaactttcaacagaagtaggtgataaagttgtcattttctctcagtcg
cttttgtctttggacttaatcgaagaagttctgaagtctgaaactagtgatgtctctaaa
ggactcaaatctgacagtggaccgtattcaaaatggctcaaatataaggattattataga
atcgatggatcaacaccagctaatttgagagatagttggatatctaaatttaataacaaa
aataacacgagaggacgattatttttaatttcaaccagagctggtggtattgggattaat
ttaatcggtgccaacagagccattgtttttgatgcttcctggaatccttctcatgatata
caatctatctttcgcatttaccgttttggtcaaaccaagccgtgttatgtctatagattt
atagctcagggaacgatggaagaaaaaatctatgagcgtcaaatcatgaagcaatctctt
gcatttcgtgtggttgatgaacaacagattttacgtcatttctccgccgctgatgtcaat
gaattatataaatttaatccagcacccaaacctgagaaatcaaatgacgagaaagacaat
gtacctaagtttgcaccaccaaaagatgcacttttggcagccatattgaaaaaatcagaa
cttgttgtaacatatcacgaccatgattcattgttagatcatcaggtatcagaggaactc
acagaagcagaacgaagggcagcgtgggaagaatatgacaatgaacaacagaaaccagtg
gactcgtcaacaaatcctatgtttgaatctttcaaagtattctctcctcaccatctcaca
catttttcggaaaatgcaaataaagtgctatctctaatagaaaagaaaatggtacaatta
tctaaaaattctttcgaaagtatattagttgaaatacagatgaagaatcgcactttcaag
cctgaaactgtttccaaacatgcgacgcagaaaaaactagatgatcatattctacttcgt
cgtttgaccgctctaaaaaaacttgtcacgtcctatcaatatgagtcaaaaagatgcctc
gctcaaaagagatcaatagcaccaccacccagacccacttcatcctctcaacctaggtca
tttcttaacccagtttcttcagccaatccacaaatcaacatgaatggatatgttcctcga
gctaatgcgccaagaaggtttacacctaataccattcctgcatccacatcaaggcaatct
acacccactacaagcttttcaagatttacacctccatctatgaatactactaatatgcca
cgacatactagatatacggtaccgccaccacgcccaactgtaccaccaaaatggagaatg
caaggaaattcaacatatactgttccaactacagctcaaacaagatatactaatccgaat
agacctcggtatagacccaactattcaaatgcccaacagaactatagacccagttcgaat
gtaagaaatgctcaaaatttcaagccaagatatacagtgctcaatcccagaagataa
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integrated database retrieval system
