Styela clava (leathery sea squirt): 120339072
Help
Entry
120339072 CDS
T07291
Name
(RefSeq) E3 SUMO-protein ligase RanBP2-like
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03013
Nucleocytoplasmic transport
sclv03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120339072
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120339072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120339072
03110 Chaperones and folding catalysts [BR:
sclv03110
]
120339072
04121 Ubiquitin system [BR:
sclv04121
]
120339072
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120339072
Chaperones and folding catalysts [BR:
sclv03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
120339072
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120339072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ran_BP1
Zn_ribbon_RanBP
WH1
IR1-M
FlxA
HypA
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
120339072
NCBI-ProteinID:
XP_039263063
LinkDB
All DBs
Position
Unknown
AA seq
1410 aa
AA seq
DB search
MVDHLPPLIENEKSYANWKKAIKLWSIATNVPKSNQAIVVALSLQDKARELALEIEESVL
RSENGIRELLKKLDITYKELKADCFSAFLDFDSCVRWPSEAMAAYITRFENRHSRLKMFQ
TSISDDMLGLKLLAGARLSTSESQKILNNDNTEWSMSTISRILRDISGSANVFDFTIPNS
WSSSFPTHVDTDSRIFQSKSKPEVAQSSKFTFSKPVFGNVGLSSTDSKNFQSKQKPAAAE
ASKFTFSYSVSGNDSFSSTVRNKKNDDVIFVSEVKPTEDQRTRAEKLLLPSTFYLYENRI
SCDFDERLEEEKEDKILKYIHDRDNGKLNYKLQHYPACADSSMTTTVTSITSSTHTSTSA
TSSSFKLSTISTTTSQTMSQSVSQTQAYSKKGMLIADKKAGAWNCFDCYAQNGPTDSKCL
CCGTPNLSAPKVEEAKGKPFASKFGTSSKPTGFEEKKEIVLKSVVEQLAKLTTLVSELQE
RKEVAESVKYQKQQEAMQLQLQQLQAQVNQSQFATPIALGRVVHLTQSEGQMPGRPMHQS
NGGSSALQPAPPELQRRREINYPEHINFPDNNSWNYKFQTPEEMDKANDKLKADEEAEDA
KTSQNDTGPHFEPIVRLSEVEIRTGEEDEEAVFSESAKLYRWTEGQWKERGVGVMKILKH
KEIGKYRILMRRDQILKICCNHLIGKDLELQAMPKSDKAWIWHALDFSEEESKQEGFAIR
FKTSELAHSFKEKFTEGKEIKIKHSGGTPVRASTTVKVTSHKPASTVDTLPKTTNSIMAQ
GETKSSTNDVTIPKFSFAFPKPSAAAANLAAKIAGSPQKVVSTADQETKPESSNNDDDQN
EDIHNESGDGPHFEPIVKLPDNFETKTGEEDEQVLYCHRVKLYKYTDKQWKEKGVGEMKI
LHNAGTKKSRIVMRRDQVLKLCANHYIIPEMKFSHLGNSDKAWTWTAVDHSDPDVEPKPE
VLAVRFKTAGEASDFVKVVNQAKDILQGKDVSSLTTTVSFIKLSTQTTATTSSFKLSTVS
TTTSQTTPQSIAQTQVSSTKGMLVVDKKAGAWNCSGCYALNEPTDSKCPCCGVPNPSAPK
VEETKPSASTFAFGISSKPTGFSFGIPSTNASVSKPIFGNQQPVQSNSATLRFGSTGFTF
GQNKSTSVTAVSTTSVFGVQTSEKSDTASTAATIPEPSVSQVSTTGVLKVTKKVGSWRCE
SCYVENEQDNANCQYCGQANPNATQAPAGEAKPGLFGMNTNQGSKFSFGISSQPTVSSTK
TSSSIVSPPKFMFGESDASSSFGFNQQQQTSNLFSNLSSTAPKSTSSTTGQLPKPRFPSV
GDEEDSDEDEDDEDYTDGTSLYYVMLKNTKSRPPNQGWPTRSSCTCCCLHRVYLNHLVNY
DSSCFDSTYDYSLCILLCRRYTSAFVNFTV
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggtggatcatctaccgcctttaattgagaatgaaaaatcgtatgctaattggaaaaag
gcaataaagctatggtcgatcgcgacgaatgttccaaagtcaaatcaagccattgtagtc
gctctgagtttgcaagataaagcaagagaattagcattagaaattgaagaatcagttctt
cgtagtgagaatggaatcagagaattattgaaaaaacttgacattacttataaagaatta
aaagctgattgtttttccgcatttcttgattttgattcttgtgtgagatggccttcagaa
gcaatggcagcgtatattaccaggttcgaaaatcgccattcgagactcaaaatgtttcag
acatctatttctgatgatatgttgggcttgaaacttcttgctggtgcgagattgtctacc
agtgaatcgcagaaaatattgaataacgataatacggaatggagtatgtcaacaatatcg
cgaatcctacgcgatatatctggttcggcaaatgtatttgattttacgataccaaactca
tggtcttcaagttttcccacgcatgttgatacagattccagaatttttcagagcaagtca
aaacctgaagtagcacagtcttcaaaattcacattttcaaaaccggtgtttggaaatgtt
ggattgtcatcaacagactcaaaaaattttcagagcaagcaaaaacctgcagcggcagag
gcttcgaaattcacattttcatattcagtatcaggaaatgatagtttttcttcaacagta
agaaataaaaagaatgatgatgttatatttgtgtcggaagtaaaaccaacggaagatcaa
cgcacaagagctgaaaaattgcttcttccatctacattttatctatatgaaaatagaata
tcatgtgattttgatgaaaggttagaagaagaaaaagaagacaaaatactgaaatatatt
catgatcgagataatggaaaattaaattataaactacaacattatcctgcgtgtgctgat
tcatcaatgacgactactgttacttctattacatcatcaacccacacttctacaagtgct
acatcatcatctttcaaattgtcaactatatctacaactaccagtcagacaatgtcacaa
agtgtttcccaaacacaagcctattctaaaaaaggaatgttgattgctgataagaaagct
ggagcatggaattgttttgattgttatgctcagaatggacctactgactcaaaatgccta
tgctgtggtacacctaatctgtcagcacccaaagttgaggaagcaaaaggaaagcctttt
gcatcaaaattcggcacttcttcaaaaccaactggatttgaggaaaagaaagaaatagtt
ttgaaatcggttgttgagcaacttgctaaattaacgacacttgtctctgaactacaagag
agaaaagaagttgcagaatcggtaaaatatcaaaaacagcaagaggccatgcaactacag
ttgcagcaattgcaagctcaagtcaatcagtcacaatttgctacaccaattgcactagga
agagttgttcacttgactcagtcggaggggcagatgccaggcagaccgatgcaccagtcc
aatggtggaagctcagctttacaaccagcaccacctgagttgcaacgtcgacgtgaaatt
aattatcctgaacacatcaattttcctgataataactcatggaattataaattccaaact
ccagaagagatggataaagcaaatgataaactaaaagcagatgaagaggcagaagatgca
aaaacatcccagaacgataccggtcctcattttgaaccaattgtgagattgtctgaagtt
gagatacgtactggtgaagaggatgaggaagctgttttctctgaaagtgcaaaattgtat
agatggaccgaaggacaatggaaggaaagaggagttggtgtgatgaagatattaaaacat
aaagaaattggaaaatacagaattcttatgagacgggatcagattctaaaaatatgctgt
aatcacttaattggaaaagatttggagttacaagcgatgcctaaatcagataaagcatgg
atatggcatgcattggatttttctgaggaggaaagcaaacaggaaggatttgctattcga
ttcaaaacttctgaacttgcgcattcattcaaagaaaagtttacagaaggaaaggagatt
aaaattaaacacagtggaggtacacctgtacgcgcgtctacaactgtaaaggtaacttca
cacaaacctgcatctactgtggatactttgcctaaaactacaaactcgataatggcacaa
ggagagaccaaatcttctaccaatgatgtaacaatcccaaaattttcttttgcttttcca
aaaccatcagcagcagctgctaaccttgcagcaaagatcgcgggttccccacagaaggtg
gtttccactgctgatcaagaaacaaaaccagaaagttcaaataatgatgatgatcaaaat
gaagacatacataatgaatctggagatggtcctcattttgaaccgattgttaaacttcct
gataacttcgaaactaaaacaggagaagaagatgaacaggttctttattgtcatcgtgtg
aagttatataaatacactgacaaacaatggaaagaaaagggagttggtgaaatgaaaatt
ttacacaatgctggcacaaagaaaagtagaattgtaatgcgaagagatcaggttttgaag
ctatgtgcaaaccattacattattcctgaaatgaagttctcacatcttggaaattctgat
aaagcatggacttggactgctgttgatcattctgatccagatgttgaacctaaaccagaa
gtactggctgttcgatttaaaactgctggagaggcttctgactttgtgaaggttgttaat
caagcaaaagatatattgcaaggcaaagatgtctcttcattgacaactactgtttctttt
atcaagttatcaacccaaactactgctacgacatcatctttcaaattatcaactgtatct
acaactaccagccagaccacgccacaaagtattgcccaaacacaagtctcttccacaaaa
ggaatgttggtagttgataagaaggctggagcttggaattgttcgggatgttatgctttg
aatgaacctactgattcaaaatgcccatgctgtggtgtgcctaatccatcagcacccaaa
gttgaggaaacaaagccttctgcatcaacatttgcatttggcatctcttcaaaaccaact
ggattttcctttgggattccttccacgaatgcaagcgtatcgaaaccaatatttggaaat
cagcagcctgtgcaatcgaattcagcaacattaaggtttggttcaactggttttactttt
ggacaaaacaagtcaacttctgtgactgctgtgtctactacttcagtattcggcgtacaa
acttcagaaaaatctgatacagccagtacagcagctaccatccctgaaccatccgtttca
caagtatcaactactggtgtactgaaggtcaccaaaaaagtcggcagttggagatgtgaa
tcttgttatgttgaaaatgaacaagacaatgcaaattgccaatattgtgggcaagcaaat
ccgaatgccacacaagcaccagctggagaagcaaagcctgggttgtttggcatgaataca
aaccagggcagtaaattctcatttggaatttctagtcaaccaacagtatcttctacaaag
acttcttccagcatagtgtctccaccaaaattcatgtttggggaatctgatgcatcttca
tccttcgggttcaatcaacaacaacaaaccagcaatttattttctaatctgagttcaaca
gcaccaaaatctacttcatctaccactggacaattaccaaaaccaagatttccaagtgtc
ggtgatgaggaagatagcgatgaggatgaagatgatgaagattacactgatggtacgagc
ttgtattatgttatgttgaagaatactaaatctcgtccaccaaatcaggggtggccaacc
cgcagctcttgcacatgttgctgtcttcatcgtgtttatttaaatcatcttgtcaactac
gattcatcatgtttcgattcaacatatgattattcgctgtgcattcttttatgtcggaga
tacacgagcgccttcgttaactttaccgtataa
DBGET
integrated database retrieval system
