KEGG   Styela clava (leathery sea squirt): 120339447
Entry
120339447         CDS       T07291                                 
Name
(RefSeq) bromodomain and WD repeat-containing protein 1-like
  KO
K11798  bromodomain and WD repeat domain containing protein 1/3
Organism
sclv  Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:sclv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sclv04121]
    120339447
Ubiquitin system [BR:sclv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     120339447
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Bromodomain Beta-prop_EML_2 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_DCAF12 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_NWD2_C Beta-prop_SPT8 NBCH_WD40 WD40_like Beta-prop_WDR19_1st STAT_alpha
Other DBs
NCBI-GeneID: 120339447
NCBI-ProteinID: XP_039263510
LinkDB
Position
Unknown
AA seq 1905 aa
MSSGINEGTNRPDIELDLYFLIARFLSQGPCTEAAKTLILELEKNGLLHKDISWTGETKR
PTFEHSLSTFRDISPDFLFQVCQRLGPLLNNSSPPSSVAKSSICGAGRYSFLRNEKTVVP
TRWSSRSFSACVEGRPLVPPHNFSPSHNWALGIFGREHGGTKFKNLLRPTKTLYGKMKLH
RRVLGHLSSVYCILYDRTGSRIFTGSDDCLIKCWSSNKGRLLSTFRGHQSEICDMDISYE
NTILASASCDKEIRIWDIRSGKPITILQSHSAMITSIEFSALVQGETRYLISTGRDGNVC
FWIWNSQTLEFATQPIKFQERNRPGVAMLCSSCSAGGRFIAVGGSDNLVHIYQIPFECGA
TMIGPMTIAEQDEHNNTVDSIWFSHNGLRLISGSKDGTARVWSFEFSTWTSLVLDVSRTF
DSPLDASIIDSNSQTNSKTQNNNNASKINVTMVAWDCNDENVMTSLTDYTIKVWNSVTRK
LLSILKGHKDEAYCLEPHPNDKRILLSAGHDGNVFLWNVDDGSVIMNFHNMLEGLGHGAV
FDAKFSRDGNSFACTDSHGHLLLFGFGDGKPYTKSPVQQFFHTDYRPLIRDQHGYVLDEQ
TQQAPHLMPPPFLVDVDGNPYPTDLQRLVPGREHANDTQTLLPDFLAEQNGLQSPSEDYV
QQNDVENVATVVESDHDPAARSVLDTIIEQMQRVENGEGPSVQDPAPFSSPSSTVGLRRE
GDLAGVRQMHRNAPRSQVASVADIVALTQRVITPQFSQEESERHEYLRQRKGASELLWHR
KERRKRRPISNRRQSRDTTNQPGFSKTPENLRKSSQRRARSNFYKEDPEDEQEQPRSSSR
HRLIRRMRAYAHGYSTRSRAPRRRMSSVAESINEELDNNLEEIEEHSTSASGETSDFLSS
EEDFSQKAKIIRRSKRKKNSKRKKKVNGVVSDVDTSNLRRSVRHRRAPKRLVNSSEGGLS
ETDDETAENTASTGSLFLSPSSNKSKHTKRKEIRKARAQRISSVASSRHEDMETSEDEER
PSTSANCQSNKKVQLTSQTTSNTDNKIKKPPKKEIAKIPFDIIPGQPPPPMYLAPDWIKR
VTPSHFPYVPQMEDEIVYLRQGHEAYISKVINDNVWPVVENELCYNLMNIGHTEPCKVIE
IEYIIGPPTRCEICLLPLNQKVSKKSKKFKVQFHDMPNVVDFLILKDKYDTSVSREWNIN
DRFRSIIDDTWWYGTVVDHSVRDPTYPDSYFQSFSVLWDSENNQEELDYLSPWDMEPIPQ
NISNLIVTRSQNHVSSSNDTLTTHALIGPKELRNVISYRYKRSDWSCDEASDSDDSESES
VEKRMVKESSRIATAIQALIDEKEFTPFASPVNVSIYPLYTIYVAFPTDLSTIQQRLQNR
FYRRSAAFLWEVSYLEKNANAFNEPDSEIVKRAEFLCSLLMRFVQGKSYHDIIELQHEME
DVDHETTDSEADVSEDSDSSVSSIPSIIHSGTEDEVESINQSQGASEYATTAEEDNSNLS
WIEDAKKLLDDVLDARDSRPFRSRVAQHEDDTETLDLVTIQNKLLTSGYTEPKEFFDDVT
LMFSEFKKSNQSREGRSMMARLSPLMSSRINTIIKDWKKNQSKACNGYNGVGVRRSKRRI
RRLSSDLWSPNSKSVSQDSDSFAEPRARKNPNSAVGAYPTRQMLRRRAKKINTVTENGEE
EVQSINSRQNHRKLRGRRLQTVDSDEAGNNEYEGENAESSVANSNHIDESTEINNEQNNH
DKQECSTRAKKRKHSDRDEIGQGDAALSIRQMKRQKRMKSSNHDSTSESEKGNDSDCDFT
INQRVLKSKKHSKTNGHISKQEQSNSNKHSLRPKRQKPTRYNDYSDLSESETETLNHLNT
SSELDNEPRIRSTRTRSKLNYENDESSEEDSENDDVDVLETGESE
NT seq 5718 nt   +upstreamnt  +downstreamnt
atgtcgtcaggtatcaatgaaggaacgaacagaccagatattgaactggatttatatttc
ttgatcgcgagatttttgtctcagggaccatgtactgaagcagccaagactttaatacta
gaattagaaaaaaatggattattacacaaagatatatcatggactggagaaaccaaaagg
ccgacgtttgaacattcattatcaactttccgggacatttctcccgattttctttttcaa
gtttgccaaagattaggtcctttattgaataactcatcacccccgtctagtgttgccaaa
tcatctatatgtggggcaggtagatattcttttttacgcaatgaaaaaactgttgttccc
actagatggagctcaaggtctttttcagcttgtgttgaaggaagacctcttgtaccccct
cataatttttctccgtctcacaattgggcccttggtatttttggtcgggaacatggaggc
acgaaattcaaaaatttactaaggcctacgaagactttatatggcaaaatgaaattacat
agaagggttttagggcatttatcttctgtatattgtattctttatgaccgaactggttct
aggatattcacagggtctgatgattgccttatcaaatgttggtcatcaaataaaggcaga
ttactttcaacttttcggggtcatcaatcagaaatatgtgacatggatatatcttacgaa
aacacaattttagcttctgcaagttgtgacaaggagattagaatctgggacataagaagt
ggaaaacccattacaattttacaaagtcacagcgctatgattacaagtattgaattcagc
gctttagtacaaggtgaaacacgatacctcatttctacgggccgagatgggaatgtatgt
ttctggatttggaattcacaaactttagaatttgctactcagcctattaaatttcaggaa
agaaatcgccccggtgttgctatgttgtgttcatcatgcagtgctggtggacgatttatt
gcagttggaggatctgacaatcttgtccatatttatcaaattccattcgaatgcggtgcg
actatgataggacctatgactattgcagagcaagacgaacacaataatactgtagatagc
atctggttttctcataatggcttacgtcttataagcggctcaaaagatggtacggctcga
gtctggagtttcgagttttcaacgtggacctcattagttttggatgtttctagaacattc
gatagtcctttagatgcaagtattatagactcaaacagtcaaactaattcaaaaactcaa
aataataacaacgcaagtaagataaatgtgactatggtagcatgggattgcaatgatgaa
aatgtaatgacttctttgacggattacacaattaaagtatggaattcggtaaccagaaaa
cttttgagcattttaaaaggacacaaggatgaagcctattgtcttgaaccccaccctaat
gataagaggattttactatcagctgggcacgacggcaatgtctttttatggaatgtcgat
gacggaagcgtgataatgaattttcataacatgctggaaggacttggtcatggcgcagtt
tttgatgcaaaattttcacgggatggaaattctttcgcttgtactgattcgcatggtcat
ttattattatttggatttggtgatggtaagccttatacaaaatcacctgtacagcagttc
ttccatactgattatcggccactgattcgtgatcagcatggatatgtgttagatgaacag
acacagcaagctccgcatctcatgcctcctccatttttagtcgatgtcgatggcaatcca
tatcccacagatcttcagagacttgttcctggaagagaacatgctaatgatacacaaacc
ctgttgccagattttcttgcagaacaaaatggtctacaatctccaagcgaggattatgtg
cagcagaatgatgttgaaaatgtggcaacggtggtggaatctgaccatgatccagctgcc
cgctcagttttagatacgataatagaacaaatgcagagagttgaaaatggtgaagggccg
tcagtgcaagatcctgctccattctcatcacccagctctactgtggggctcagaagagaa
ggcgatttagcaggagtgagacagatgcatcgaaacgcaccacggagtcaagtcgcgtct
gtggcagatatagtggccctaacacaacgtgtcataaccccgcaattttctcaagaagaa
agcgagagacatgagtatttacggcagcgaaaaggtgcgtctgaattactctggcatcgc
aaagaaagaagaaaacggcgaccaatatcgaatcgaagacaatcacgcgatactacaaat
caaccaggcttctcaaaaacaccagaaaatttacgaaaatcatcacagcgcagggcgagg
tctaatttttataaagaagacccagaagatgaacaagaacaacctaggtcatcatcgagg
catcgtttgattcgcagaatgcgagcttacgctcatggttatagtacacgttctagagct
cctagacgacgcatgtcttcagtggcggaaagtattaacgaagagttagataataattta
gaagaaattgaagaacactcaaccagtgcttctggtgaaacttccgatttcttatccagt
gaggaagattttagtcaaaaagcgaaaataattcgtcgcagtaaaagaaagaaaaattcg
aaacgaaaaaagaaagtaaatggcgttgtttctgatgttgacacatccaatttgaggcga
agtgtaagacaccggagggcaccgaaaagactggtaaactcctcggaaggtggtttatca
gaaacagatgacgagactgctgaaaatacagctagtacaggctcgttatttctatcacca
agttcgaataaatcgaagcacaccaaacgaaaagaaatacggaaagctcgtgcacaacga
atctcctctgttgcttcatcccgacacgaggatatggaaacatcggaagacgaagaacga
ccttcgacctctgctaactgtcaatcaaataaaaaagtgcaattaacaagccaaactacc
tcaaatacagacaataaaattaaaaaaccacctaaaaaagaaatcgctaaaattcctttt
gatataattccaggtcagccgcctcccccaatgtatcttgctcctgattggataaaacgt
gtcaccccctctcattttccatatgtgcctcaaatggaagatgaaattgtttatcttcgg
caaggccatgaagcttatattagcaaagtgattaacgataacgtatggccggtcgtggaa
aacgaactctgctataacctgatgaatataggacatacagagccttgtaaagttatcgaa
atcgaatacattatcggcccaccgacccgttgcgaaatctgcctcctccctttgaaccag
aaggtttcaaaaaagtcaaaaaaattcaaagtccaatttcatgatatgcctaatgttgtt
gattttttaattctcaaagacaaatatgacactagtgttagtagagagtggaatataaac
gataggtttcgttctattattgatgatacttggtggtatggaacggttgtcgaccatagc
gtacgtgacccaacttatcctgacagctattttcagtctttttccgtcttgtgggacagt
gagaacaatcaagaagagttagactatctttcaccatgggacatggagcctattccacaa
aacatttctaatcttattgtaacacgctctcaaaatcacgtaagctcaagtaatgatact
ctaacaacacatgcactcatcggaccaaaagagcttcgcaacgtaatttcctaccggtat
aaaagatctgactggtcatgtgatgaggccagtgattcagatgatagcgagagtgaatct
gttgaaaagagaatggttaaagagtcttcgagaatcgcaaccgcaattcaagcgctcatt
gacgaaaaagagtttacaccgttcgctagcccggtcaatgtttctatttatcctttgtat
acaatatatgttgcatttccaacagatttatcgactattcaacaaaggctacaaaatagg
ttttatagacgttctgctgcattcctatgggaggtttcatatttggaaaaaaacgcaaat
gccttcaacgaacctgattctgaaattgtgaaaagagcggaatttttatgcagtttgtta
atgagatttgtgcagggaaaatcatatcatgatattatagaattgcaacacgaaatggag
gacgttgatcatgaaaccacagactcagaagctgatgtttcagaagatagtgattcttct
gtaagcagtattccttccatcatacactccggaaccgaagatgaagtcgaatcaataaat
caatctcaaggtgcgagtgaatatgcgacaacagctgaagaagataattcaaatttgtca
tggatagaagacgctaaaaagttattagatgatgttctcgacgctcgggattcgagacct
tttcgaagccgtgtagcacaacatgaagatgacactgaaacattagatttagttacgata
caaaacaaattgttgacttcaggatacactgaaccgaaagaatttttcgatgatgttaca
ctaatgttttcggagtttaaaaagtcgaatcaaagcagggaagggaggtcaatgatggcg
cgattgtcacctctaatgtcgtcaaggattaacactataattaaagattggaaaaagaat
cagtcgaaagcatgcaatggctataatggggtaggagtacgaagatcgaaaaggcgtatt
agacgtctttcgtctgacttatggtcgccaaattctaaatctgtgtcccaagactcagat
tcttttgcggagccgagggccagaaaaaatccaaattcagcggttggtgcttatccgaca
cgccaaatgttgcgaagacgcgcgaaaaaaatcaacaccgtcacagaaaatggtgaagag
gaggtgcaatcaataaattcaaggcagaatcatcgtaaattaaggggtcggaggttacaa
acggtagattctgacgaagccggtaataatgaatatgagggagaaaatgctgaatcatct
gttgctaatagcaaccatatcgatgaatcaacagaaattaacaatgagcaaaacaatcac
gataaacaagagtgcagtactcgagcaaaaaaaaggaaacattcagatcgagacgaaata
ggtcaaggagacgcagcgttatcgattcgccaaatgaaacgacaaaaaaggatgaagtca
tccaatcatgactctacgagcgagagcgaaaaaggcaatgacagcgattgcgattttaca
attaatcagagagtactgaagagcaaaaaacattcaaaaacaaacggacacatcagcaaa
caagaacaaagtaattcaaacaagcatagtctacgaccaaagagacaaaaacccactcgt
tacaacgattactcagacttatcggaaagtgaaacagaaacgctgaatcatttaaatact
tcttcagaactcgacaacgagcctagaataagatcgacccgaacgagatcaaagttgaat
tatgaaaatgacgaaagttccgaggaagatagcgaaaatgatgatgtggatgttttggaa
acgggggaatcagaataa

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