Styela clava (leathery sea squirt): 120339449 Help Entry 120339449         CDS       T07291                                  Name (RefSeq) RNA-splicing ligase RtcB homolog   KO K14415   tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] Organism sclv  Styela clava (leathery sea squirt) Brite KEGG Orthology (KO) [BR:sclv00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03016 Transfer RNA biogenesis [BR:sclv03016]     120339449 Enzymes [BR:sclv01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase      120339449 Transfer RNA biogenesis [BR:sclv03016]  Eukaryotic type   tRNA spricing factors    tRNA splicing ligase complex     120339449  Prokaryotic type    tRNA splicing ligases     120339449 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RtcB Motif Other DBs NCBI-GeneID:  120339449 NCBI-ProteinID:  XP_039263511 LinkDB All DBs Position Unknown AA seq 504 aa AA seqDB search MGRSYQEECEFLEKVSPNCWKIKKGFVPNMKVEGMFYVNDHLEKLMFDELQNSCRGGVGG FLPGVKQIANVAALPGIVKNSIGLPDIHSGYGFAIGNMAAFDMSDPEAIVSPGGVGFDIN CGVRLLRTNLSESDVQPVKEQLAQALFDHIPVGVGSKGVIPMNAKDLEEALEMGVDWSVR EGYAWAEDKEHCEEYGRMLQADQSKVSARAKKRGLPQLGTLGAGNHYAEIQVVDEIFNNH AAKKMGIDHKGQVCVMIHSGSRGLGHQVATDALLSMEKAMKRDNIVVNDRQLACAKIASQ EGQDYLKGMCAAGNYAWVNRSSMTFLTRQAFGKVFKCAADDLDMHLIYDVSHNIAKVEEH FVDGKQKTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMEE TFGTTCHGAGRALSRAKSRRNIGYQDVLNKLADLGISIRVASPKLVMEEAPESYKNVTDV VNTCHAVGISKKAIKLRPIAVIKG NT seq 1515 nt NT seq  +upstreamnt  +downstreamnt atgggccgatcataccaagaagaatgtgaatttctggaaaaagtgagtccaaattgttgg aaaattaagaagggttttgttcctaatatgaaggtcgaaggaatgttctatgtgaatgat catcttgaaaaactgatgtttgatgaactgcagaactcatgtcgaggaggggtgggtgga ttcctaccgggtgtcaaacaaattgcaaatgtcgcagctctgcctggaattgttaagaat tcaattggcctaccagatattcattcagggtatggatttgcgatcggtaacatggcggct ttcgatatgtcagatcctgaagctattgtatcaccgggtggagtaggtttcgacataaac tgtggagtacgacttctacgaacaaatctttcggaatcagacgttcaaccagtgaaagaa caattagcccaggcattgtttgatcacattcctgtgggtgtcggatctaaaggtgtcatc cctatgaatgcaaaagatttggaagaagcattagagatgggggttgattggtcagtacgt gaaggttatgcatgggccgaagataaagaacattgtgaagaatatggaagaatgcttcaa gccgaccaatctaaagtatctgctcgcgctaaaaagagaggattaccgcagcttggaacc cttggtgccgggaatcactacgcagaaatccaagtagttgatgaaatattcaacaatcat gcagccaagaagatgggaattgatcataaaggacaagtctgtgtgatgatacacagtgga agccgaggacttggacaccaagttgccactgatgctcttttatcaatggagaaagcaatg aagcgtgacaatatcgtagtaaacgacagacaacttgcgtgtgctaaaatcgcatcacag gaaggacaagattatctgaaaggaatgtgtgctgctggcaactatgcttgggttaatagg agctcaatgacttttctgacacgacaggcttttggaaaagtattcaaatgtgcagcggat gatctagacatgcatttgatttatgatgtttcacataatattgcaaaagtcgaggaacat tttgttgatgggaaacagaaaactttacttgtgcataggaagggctcaacacgagctttc ccaccacaccatccacttattcctgttgattatcagttaacaggccagccagtcctgata ggaggaaccatgggaacctgtagttatgtattaactggtactgagcaaggaatggaggag acttttggcacaacttgccatggagcgggccgtgcactctctcgcgcgaaatcacgaaga aacatcggatatcaagacgtcttgaacaaactcgctgacctcggaatttctattcgtgtg gcatcacctaaacttgttatggaagaggctccagaatcatacaaaaatgtaacagacgtc gtaaacacatgccatgctgttggaatcagtaaaaaagcaataaaattacgacctatcgct gtcattaagggataa

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