Styela clava (leathery sea squirt): 120339565
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Entry
120339565 CDS
T07291
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX2 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120339565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sclv04121
]
120339565
Enzymes [BR:
sclv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120339565
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120339565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DTC
WWE
zf-RING_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-RING_11
U-box_ZFPL1
zf-RING_5
PHD_4
PHD
PHD_NSD
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
120339565
NCBI-ProteinID:
XP_039263658
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MASSSNSAVQPDIVVWEWEDDFGHYIPYDPLSCHAIENVFNTGKSTVKLGNANPLLKFHE
VDVQSSRQKNTVTGRERAVKRRSLPATHALAQQVSWEWDKSSSKSHAPDWSSYSTDMIDY
IERKHSEKKHLFVFPPHFGMDHRINLKSETQVNKTTQYLRKIKRVKLQDSYPISSSTVSQ
SNHRPRLPHAHQYQWNPVSNHGITNGYPGTTTYQNSFRNLQNSSTPSVPPLQSNGSTVTS
QIALSYAAMASQRPLPKTPSGATGTSSTTSRTGNANTRKISTKSSVKVPPCPPGGIPCTS
GSSTSIVPIHEVIKHFMKSLSIDPKSTDDCAICQSQLTETSGFGQSKDTLELNLCKHIFH
TECIEASYSHSVQNGCFVCPACNKMHGIKTGTQPPGTMTYTTSQSHLPGYASCGTLQVTY
NIPSGIQTSEHPHPGKRFIAHGFPRVGYLPDNNKGRRILLLLIEAWKRRLIFTVGQSSTT
GMDDCVTWTGIHHKTEKTSRGGHGYPDEGYLDRVLSELAAEGVIEEESKA
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcaagcaactctgctgttcaaccagatattgttgtttgggaatgggaagat
gattttgggcattacatcccgtatgaccccttatcctgccatgcaattgaaaatgtattc
aatactggtaaatcaactgtgaaacttggaaatgcgaacccacttcttaaatttcatgaa
gttgatgttcagtcatccaggcaaaagaacactgtgacaggtagagaaagggccgttaaa
agaagatctttaccagcaacacatgctttggcacagcaagtctcatgggaatgggataag
tcttcatcaaaatctcatgcacctgattggagttcgtattctaccgacatgatagactat
attgaacgaaaacattcggaaaagaagcatttgtttgtgtttccacctcactttggcatg
gatcatcgcatcaatctgaaaagtgaaactcaagtgaacaagacaacacaatatttaagg
aaaataaaacgtgtcaaactgcaagattcctatccaatcagttcctccacagttagccaa
tcaaatcacagaccccgcctaccacacgcccatcaatatcaatggaacccagtttcaaac
catgggattactaatgggtatcccggtactacaacttatcagaacagtttccgaaacctg
caaaattcttccaccccctctgtacccccacttcaaagcaatgggtctactgtgacatca
caaattgctctttcatacgctgctatggcttcacaaaggcctttacccaaaaccccttct
ggagccactggaacatcatctactactagcaggacaggaaacgcaaatactagaaagata
tcaacaaaaagcagtgtgaaggttcctccatgtccacctggtggcatcccgtgcacttca
ggtagcagtacatctattgttccaattcatgaggtcataaagcattttatgaagtcattg
agcatcgacccaaaatcaacagatgattgtgcaatatgtcagagccaactgactgaaact
tctggatttggacaaagcaaagatactttggaattgaatttgtgcaaacacattttccac
actgaatgtattgaagcttcgtatagccatagtgtgcagaatggttgctttgtatgtcca
gcctgtaacaaaatgcatggtataaagacgggaacccagccaccagggaccatgacttat
actacatcacaaagccatttgcctggttacgccagctgtggaactctacaagtaacatac
aacataccatctggcattcagacatctgagcatcctcacccaggaaagcgattcattgct
cacgggttcccgagagttggatatcttccagataataataaaggaagaaggattttactg
ttgctcattgaagcgtggaaacgtcgattaattttcacggttggccaatcaagcacgact
ggaatggatgattgcgtaacatggaccggaattcatcataaaaccgaaaaaacttcgagg
gggggacatggatatcctgacgagggatacttagatcgagtgttgagtgaactcgctgct
gaaggagtgattgaggaggagagcaaagcataa
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