Styela clava (leathery sea squirt): 120339682
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Entry
120339682 CDS
T07291
Name
(RefSeq) ATP-dependent translocase ABCB1-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120339682
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sclv02000
]
120339682
04147 Exosome [BR:
sclv04147
]
120339682
04090 CD molecules [BR:
sclv04090
]
120339682
Enzymes [BR:
sclv01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
120339682
Transporters [BR:
sclv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120339682
Exosome [BR:
sclv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120339682
CD molecules [BR:
sclv04090
]
Proteins
120339682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
Zeta_toxin
AAA_16
AAA
AAA_15
AAA_5
AAA_29
G-alpha
Rad17
PRK
DUF815
DEAD
NTPase_1
Glycophorin_A
DUF6799
Motif
Other DBs
NCBI-GeneID:
120339682
NCBI-ProteinID:
XP_039263788
LinkDB
All DBs
Position
Unknown
AA seq
1326 aa
AA seq
DB search
MKYKDNVDEDQIQVKVVGMKQNGDESPPPNYETATSNGTPVTKDGKTESKDIKDDTSEIG
YFGIFRFATGKDYFYILIGTISAIIHGASLPVMFIFFGDMTNSFVSYGKYEPCAFNYTLC
VQQGVIDPNVTTFFEFVQELEEYGTELNSEMARYSLYYVYLAIIILVFASIQVYFWMLQA
VRQVRQIRIKFFQSILRQDIGFFDLNSVGELNTRLADDIQKIQDGISDKVSISIQMFARA
LAGLVIGFIYSWKLALVILAVSPLLGISAAMLFKIATAFTKKELQAYAQAGAVAEEVISS
IRTVVAFGGEEKECERYVANLSHAKTVGIKKGTMNGVGIGLVFFIMFATYGLAFWYGSEL
VLAGELNIGHLLVAFFGVLIGAFSLGQSGSNMEYFSAATAAAGKIFEIIDREPPIDSFST
EGHKPQQVSGQIEFKNVDFTYPSRPDVQVLKGISFKAEVGKTIALCGQSGCGKSTCVQLI
QRFYDPQNGVIEFDGHDIRTLNTRWLRENIGVVSQEPILFDTTIRENIKYGRDGVTDQEV
EEAAKQANAYDFIMKLPNKFETLVGEGGAQMSGGQKQRIAIARAIVRNPKIMLLDEATSA
LDTESESIVQAALEKASQGRTTIVIAHRLSTIRNSDVIIGFSDGKVMEQGSHNELLKLED
GVYQNLVHMQTYGTEDVEKKEEKETAEIDNLPLQDEIKSAPKRRSTKRKRVLSESSTKSG
GKDEEVVMDEEEEEEDLPEVPFSRVVALNKPELGFIISGCFAAAVNGGIQPCFAILFSGI
LGIFGEPDNIDHQKDQVRLYALLFVAIGAAAFIANLIQAASFAKSGEELTSRLRSRGFRA
MLRQDIAYFDDHRNSTGALTTRLATDASRVQGCTGVRAGTVIQNICALGVALGIAFAYGW
QLTLITLCFVPFMIIAGFIMMRLLTGKSGTESKAYEKAGSIATEATLNIRTVASLTKEQY
MFDKYKEALVFPFSKSQQKALFYGVSFGFSQCIVFFAYAATFRYGAYLVEEGVMSFDNVY
KVLMAVIFGAFAVGQTSSFAPDYAQAKISTNRLFKLLDRVPEIDSYSPEGETPESSRGKT
AIYNAKFNYPTRPDFLVLKGLSVAVEPGQTIALVGQSGCGKSTCIQLIERFYDPTEGQVL
LDDKDNKSLNISWLRRQMGIVSQEPVLFDRSIADNIRYGDNTYVASMEEVVAAAKAANIH
NFIETLPDGYNTSVGDKGTQLSGGQKQRVAIARALLRNPKVLLLDEATSALDTESEKIVQ
DALDAARQGRTCIVIAHRLSTVKNADNIAVVENGTIVEFGKHDELLALQGSYFSLVNAQL
NGAQET
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgaaatataaggataacgtggacgaagatcaaatccaagtaaaggtggttggaatgaaa
cagaatggagatgaatcacccccaccaaactacgaaactgctacttcaaatgggacacca
gtaacaaaagatggaaaaacagaaagcaaagacataaaagatgatacttctgaaattgga
tattttggaatttttcggtttgctactggcaaggactacttctacattttgatcggaaca
atatcagctatcatccatggagcatctctgccggtcatgtttatattctttggtgacatg
accaatagtttcgtcagttatggaaaatatgaaccgtgtgctttcaactacacattatgt
gttcagcaaggcgtgattgatccgaatgtaactacattttttgaattcgtacaagaactt
gaggaatatgggacagaattaaattcggaaatggcacgatattcactttactatgtatat
ctggcaataatcatattggtttttgccagtattcaggtgtacttttggatgcttcaagct
gtgagacaagttcgtcaaattcgtatcaagtttttccagagtatattgcgtcaagatatt
ggtttctttgatttgaattcagttggagaattgaacacaagacttgctgatgacattcaa
aaaattcaagatggaataagcgacaaagtatcaatctcaattcaaatgtttgcaagagct
ttggccggtcttgtcattggcttcatttacagttggaagttggctcttgttatccttgca
gtttcacctttactaggaatttctgctgctatgctcttcaaaatcgctacagctttcaca
aagaaagaattacaggcatatgcacaggctggtgcagtggccgaggaagttatttcttcc
ataagaactgttgttgcttttggaggagaggaaaaagaatgtgaaaggtatgttgcaaat
ctttcacatgcaaaaactgttgggataaagaagggtaccatgaatggtgttggtatcgga
ttggtattttttataatgtttgcaacttatggtctcgcattttggtatggatctgaactt
gtactggctggcgagttgaacatcggtcacctactcgttgcttttttcggcgtcctaatt
ggcgctttttcacttggtcagtctggaagcaacatggagtatttttctgctgccacagct
gcagcagggaaaatatttgagataattgatcgcgaaccgccgattgattcattttcaaca
gaaggtcataaaccacaacaagttagcggtcaaattgagtttaaaaatgttgacttcact
tatccatcgagacctgatgtgcaggtgttgaaaggaatttcattcaaagctgaggttgga
aaaaccatcgcattgtgtggtcaaagtggatgtggcaaaagtacctgtgtacaactgata
caaagattttatgatcctcagaatggagtgatcgaatttgatggtcatgatattagaaca
ttgaacacaagatggctgcgtgaaaatattggagttgtgtcacaagaaccaattttgttt
gatacaaccattagagaaaatatcaaatatggacgagatggggttacagatcaagaagtg
gaagaagctgcaaaacaagcaaatgcttatgattttatcatgaagcttccaaacaaattc
gaaactctagtgggagaaggaggtgcacaaatgagtggtggacaaaaacagcgtatcgca
attgcccgtgccatcgttcgtaaccctaaaattatgctgcttgacgaggcgacttctgct
ctggatactgaaagcgaatccatagtgcaggctgctttagagaaggcatctcaaggacga
actacaatcgttattgctcatcgtttatcgacaatccgaaactctgacgttatcattgga
tttagtgatggaaaggtgatggaacaaggaagccacaatgaattactgaaattagaagat
ggagtttaccaaaacttagtccacatgcaaacatacggcacagaagatgttgaaaagaaa
gaagagaaggaaaccgctgagatagacaatttaccattgcaagacgaaatcaagtcagca
ccaaaacgtagaagtacgaaacgaaaacgtgttttgagtgaatcaagtacaaaatcagga
ggaaaagatgaggaagtagtgatggatgaagaagaagaagaggaagatttacctgaagtt
ccctttagcagagttgtagctctcaacaaaccagaacttggatttattatatccggatgt
tttgctgcggctgtcaatggaggaattcagccgtgttttgcaattttgttttctggcatc
cttggaatatttggagaacctgataatatagatcaccagaaagatcaagttcgtttatat
gctctgctgtttgttgctattggtgcagcagcattcatcgctaatctgatacaggctgcc
tctttcgctaaatctggagaggaattgacaagtaggttacgttcaagaggattccgagca
atgctgagacaagatattgcatattttgatgatcatcgcaacagtactggtgcattgact
acaagactggcaacagatgcttcacgagtgcaaggatgtactggagtccgagctggaact
gtcatccaaaacatatgtgctttaggtgtcgcccttggaattgcttttgcttatggatgg
caactaacattgatcacattatgttttgttcctttcatgatcatcgccggcttcattatg
atgagattgcttactggaaagtctggaacagaatcaaaagcttatgaaaaagctggttcc
attgctacggaagctacattgaacataagaactgttgcttctctcacgaaagaacaatac
atgtttgataaatataaggaggcgttggtattcccattcagtaaatctcaacaaaaagcc
ctgttctatggtgtatcttttggattttctcaatgtattgttttcttcgcatatgctgca
acattcagatatggtgcatatcttgttgaagaaggcgtcatgtcatttgacaatgtatat
aaggtactcatggctgtcatcttcggagcatttgcagttggacaaacttcttcttttgca
ccagattacgctcaagctaaaatatctactaacagattgttcaaacttcttgatagagtt
cctgaaattgacagttacagtccagaaggggagacgccggaatcatctcgtggaaagact
gctatttacaatgcgaagtttaattatccgactcgtccagatttccttgtgttaaaaggt
ttgtctgtcgcagtagaaccaggacagacaattgctttggttgggcagtctggatgtgga
aaatctacttgtatccaactgattgaacgtttttacgacccaacagaaggacaagtgctg
ctggatgacaaagacaataagtctctaaatatctcgtggttgagacgacagatgggaatc
gtgtctcaagaaccagttttgtttgatcgatcgattgctgataatattcgatatggagat
aacacatatgttgcatcgatggaggaagtggttgcagcagcgaaagcagcaaatatccat
aattttattgaaacattaccagatggatacaatacatccgttggagataaaggaacccag
ttatcaggaggacaaaagcaaagagttgccattgctagagctttacttagaaaccccaaa
gttcttcttctggatgaagctacttctgctttggatacagaaagtgaaaaaattgtgcaa
gatgctttggatgcagcaagacaaggaagaacatgtattgttattgctcatcgtttatcg
actgtgaagaatgcagacaacatcgctgtggttgaaaacggcaccattgtcgaattcgga
aaacatgatgaactgttagcattgcagggctcttatttcagtttggtgaatgcgcaattg
aatggtgcccaggagacgtag
DBGET
integrated database retrieval system
