Styela clava (leathery sea squirt): 120339686
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Entry
120339686 CDS
T07291
Name
(RefSeq) uncharacterized protein LOC120339686 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120339686
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
120339686
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0114
Motif
Other DBs
NCBI-GeneID:
120339686
NCBI-ProteinID:
XP_039263796
LinkDB
All DBs
Position
Unknown
AA seq
1898 aa
AA seq
DB search
MLSRRKRPVPFHHRGLVAPRTGVGGPLNIKGETVAVPEEISEDSARGASILPSSRTEGGT
QYQETTSLQPFINEEIAEVTTPEPEETVSPTPVPPQPTPERLFSSWGQEMAADVSDLIKG
GGSELVLPTLTQGRTPQFAIQGSPRSNSRMRAATTPASKRLPGIPEPNTGTAITPSGRKT
ALPPYYVKSSIDDVERFPAIHASVWASRGEKRVEYRGFVSAPPVSATPPTTAPRKGSPLR
LNTIPLKRPSAVNKPDDTPAPCWRCALHLEHSKCETTKYIRIGGGFRHSYWFVRQMIERA
RIEEMQKLSVLRGEQRKIFQEKLMWRIGADGKRERRIKTFVRTASGRKIVKYQYVAEDVF
DDMMKLREGGSESAKRRLQEKLAAAGIDQDQLDTDWDPNDVGLDDLALDEEGNVLVDEFG
EPIDVFDEEKVQKAIERRRKQRRGRLGSEDEESHADSGLAFDEKEEKERRRRRDGKSGSE
SDEEEGATRRIRKKGATGWESESDEEGPGGRGKNKKKGGGDWDSGSDDETGVGGRKKGRK
KGHDDDDSAYSGDSQAKGKGKGKKKGGHHGDGDFDDSGSDHGHGRRRKGKKGKGRGGDSE
DDTDDSRGGHGKKKGRKGKKKGGGDYDSGSESDGGGRGGRKKKGKKGKGKYDDDDDESGS
DGGRRGGKKKGRKKKGGGGDDEEFSDDSQGGHGKKKKKNRRGRKGDESGSGSDYSGEDGD
RKGRKKHGKRRGHRHDSRSGSRSDSGGGGRRRRGGGRRRRGGRHGDSGSDSRSGSRSHSR
SRHRGKGRRHRHHGDDDDYSGSGSRSRSGSRSRRRRSRHRRRKDGSDYGSGGSSYDSGDS
RGGLRRHGKKKHRHRHRGRHGSSGSEGDSGSDEEGGRRRKHKKHRSRHRRRSGSAHSDYS
SRTPSGSESGDSRSRRKSRHRRKKKHRHRHSSDDDYSDYSDDRDRKSRRRRHRRHGSSDR
SGSETDDSDRSRRRSRRRRRKRREDDSGGSSGDSDDSRHRRRRRRRRHRSGSGGSDYSSD
SDRSRRRRRRKHKHRDGSEDSGSESDRSRRHRRHRRHRRHGDDDSSGSESDRSRRRRHRR
HRRRSYSTGSSSSRSRHRSRRKKDRHRRRGKYSDSDTSSYSDDSDDSRRRHRRHRRHKKY
SDDSDSSSDDSRRDRRRRKDKKDRRHRRRYSTSTEESSAGDEKHSKRKDRKKDRRKKYYS
DSSETDSDDSNRSRGHKKKKRRPPRPPSTSSSDLSSEASSNKLRGMTKEKRKEYERRRRE
KIERKEERQRMRDEYERYQEKKERKKERRKARERGEPVSTSSESDWGDGKTAVKYGRGAR
RGHDRKDSDDFRDIGYDDPNDPWKKKDRRKHEKKKKDKGRRGDTGAGSSDDIPSSESEFD
EVTGRRVKKDKTKKKGRGDLSSDSEVESIYEDVFNEDGTVERKKIRVPKSKKKKEKIYDD
DELDQESEYDSIDSAEADRMIARQIYDKDGEVIRLTKDGRRIKDGKISKEVFDLEKHKQK
KEKKRREKQLLERSYEEEYVEEFLDEDGQVVRVVKKRLKGQTLPGRRPTTPLTGPRRVQV
LFLKGGKYLQDRLNMLLETCTLNTADPRKRLRPISASSDEGALDLDERDGRIDYLSHYRL
VEPEKLETYGKAFVVEDTDENNVLNLNETKVALEGIPTLQGLSPRQMHYILKILGIDDAT
LVTFKMFAVVCALCERLLEVVDEQTKQWMEIDDLMDLERKLDLYRQMFYWNICSDRSSNY
IKASSLRVELIAGGVSRRQEDEVMARIETNIYREVSFLDYMAFVPLFLCAHENIVENPLD
NSRDKFTGEKEKTLIPEKDMVPLGRQMSRKAALSMGSIPIPYLFEKRPGSSLRKRIRLCL
PKPPIEEVGTPDSMATPIMSPVPPKVSRLEALKKRMKL
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atgctatcccgacgcaagagaccggtaccattccaccatagaggtttggttgcccccagg
actggagtaggagggccgttgaatatcaaaggagagacagtagccgttcctgaggaaatt
agtgaagatagcgcaagaggcgcctctatacttccttcgtcacgaaccgaaggcgggact
cagtaccaagagactactagcttacagccatttattaatgaagaaatagccgaggtcacg
accccggaaccggaagaaactgtatcaccgacacctgtccctccacaaccgacaccggaa
cgacttttcagttcatggggccaggagatggcagcagacgtttcagacttgataaaaggg
ggaggctctgaattagtcctccccacgttgactcagggacgaaccccccaatttgcaatc
caaggatctcctagatctaactcaagaatgcgagcagccactacccccgcttcgaagaga
cttcctggcataccggaaccaaatacaggaacagccataacaccttcaggccgcaagaca
gctttaccgccctactatgttaagagttctatagatgacgtggaaaggtttccagcaatt
catgcaagcgtttgggcatcacgcggagagaaaagagtcgaatatagaggctttgtttct
gctccaccggtttctgcgactccgcccacgacagctccgaggaaaggaagtccgttacga
ctgaacacgattcctctgaaacgtccttctgcagtgaataagccagatgacacgccggca
ccgtgctggcgatgcgctctacatcttgaacattcgaaatgtgaaactacaaagtatata
agaattggtggtggattccgtcacagttattggttcgtccgtcaaatgatcgagcgagct
cgaattgaagagatgcagaaactgtcagtactacgaggagaacaaagaaagatcttccaa
gagaagttgatgtggagaattggcgctgatggaaaacgtgaaagacgaatcaagacattt
gtccgaaccgcaagtggaagaaagattgtaaagtaccaatatgttgcagaggatgtattc
gatgacatgatgaaactccgcgaaggtggctcagagtcagcgaaacgacgtttgcaagag
aaacttgccgcagcaggtattgaccaagaccaactagacacggactgggatcccaatgat
gtcggcctcgacgatctagcgctagacgaagaaggaaacgttcttgtcgatgagtttggc
gaaccaattgatgtttttgatgaggaaaaagtacaaaaagcgatagaacgtcgtcgtaaa
caacgtcgaggacgactcggcagtgaagatgaagaatctcatgcagacagtgggcttgct
tttgatgagaaagaagagaaagaaaggagaaggaggagagatggtaagagtgggagtgag
agtgatgaggaggaaggagcaacaaggagaataagaaaaaaaggagcaacagggtgggaa
agtgagagcgacgaagaagggccaggtgggaggggaaaaaacaagaaaaaagggggtgga
gattgggatagtggaagcgacgacgaaactggagtagggggacgtaaaaagggccgcaaa
aagggccatgatgatgatgatagtgcgtactctggggattcccaagcaaaggggaaaggc
aaaggaaagaaaaaaggtggtcaccacggagacggcgatttcgacgacagcggatcagat
cacggacatggacgacgtcgcaaaggcaaaaagggcaaaggtcgtggcggtgattcagaa
gatgacactgatgacagcagaggtggacacgggaagaaaaaaggacgcaaaggaaagaaa
aaagggggtggggattacgattcaggcagcgaaagtgatggtgggggtcgtggggggaga
aaaaagaaaggaaaaaaagggaaaggcaaatatgacgacgatgatgatgaatctggaagt
gacgggggacgacgtggggggaagaaaaaaggccgaaaaaagaaagggggagggggtgat
gacgaggaatttagtgatgactctcaaggaggtcacggcaagaaaaaaaagaagaatcga
cgtggccgtaaaggagatgaaagcggatctggatcggattactccggggaggacggtgat
cgcaaagggagaaaaaaacatggaaaacgtcgaggccacagacacgattctaggagtgga
agtcgttcagatagcggtggtggtggtaggagacgtcgtggtggtggtaggagacgccgg
ggtggtcgtcatggtgattcaggatctgattcaaggtcaggatcaaggtcgcattctagg
tcaagacatagaggcaaaggtcgtcgacatcgtcaccacggtgatgatgatgactactca
gggtcaggttcaaggtcaagatcagggtcaagatcacgaaggcgtagaagtcggcacaga
cgaagaaaggatggttctgattatgggtcaggtggaagctcgtatgatagtggcgactca
cgcggggggcttcgtagacatggaaaaaagaaacatcgccaccgacaccgtggacgtcat
ggttcatcaggtagcgaaggtgatagtggcagcgacgaggagggcggacgtcgaagaaaa
cacaaaaaacaccgatctcgtcatcgcagacgtagcgggagcgctcactcagattattca
agtcgaacgccatcggggagtgaaagtggggacagtcgttctcgtcgtaaaagtcgacac
cgtcgtaaaaagaagcatagacatcgacattcatcggatgatgattacagcgactatagc
gatgatcgtgaccgcaaatcccgcagacgaagacatagacgtcacggatcttcagatcgt
agtggaagcgagacagatgacagcgatagatcgagaagaagaagcaggagacgcaggaga
aaaagaagagaagatgattctggtggatcgtcaggtgatagcgatgacagcagacatcga
aggagacgcagaagacgtcggcatcgttctggatcaggagggtcagactattcctctgat
tctgatagaagtagacgccgtcgccgacgaaaacacaaacatcgtgatggcagtgaggac
tctgggagtgaatcagaccgtagccgtcgtcataggagacacagacgtcatcgtcgccat
ggtgatgatgacagttctggttcggaatctgatagatcgagacgtcgaaggcatagaaga
catagaagaagatcttacagtacaggatcaagttcttctcgttcccgccatcgaagcaga
agaaagaaagatagacatcgacgccgaggtaaatattccgattctgatacaagctcttac
agtgatgattcggatgattcaagaagaagacacaggagacatagaaggcataaaaaatat
tcagacgattcagattcaagtagcgatgacagcagacgagacagaaggagaagaaaagat
aaaaaagatcgccgacatcgccgtcgttactcgaccagcacagaagaaagttctgctgga
gacgagaaacattcgaaacgaaaagacaggaagaaggacagaagaaagaagtattattct
gactcttctgaaactgacagcgatgatagcaatcgaagtcgaggccacaaaaagaagaaa
cgccgtccgcctagaccaccaagcacatcatcgagcgacctcagttccgaggcttcgagt
aacaagctacggggaatgactaaagagaagcgaaaagagtacgagagacgcaggagagaa
aaaattgagagaaaagaagaaaggcaaagaatgagagatgaatatgagagatatcaggag
aaaaaagagaggaagaaagaacggagaaaagctcgtgagcgtggagaaccagtgtcaacg
tcttctgagagtgattggggggatggaaaaacggctgtaaaatatggacgaggagcgagg
agaggacatgaccgaaaagattcagatgacttcagagacattggatacgatgatcctaat
gatccttggaaaaagaaagatagaaggaagcatgaaaagaaaaagaaagacaaaggaagg
aggggggataccggagcggggagttccgatgatattccctcctcagagtcagaatttgat
gaagtcactggaagaagagtgaagaaggataaaactaagaaaaaagggagaggtgatcta
tcctctgatagtgaagttgaatcaatttatgaagatgttttcaatgaggatggaactgtt
gaaagaaagaagatccgggttccaaaatccaagaagaagaaagagaaaatttacgatgat
gatgaactggatcaggaatctgaatacgactccattgatagcgctgaggcagatagaatg
atagccagacaaatatatgataaggacggtgaagtaatcagactaactaaagatggccgc
cgaatcaaggatggaaaaataagtaaagaagttttcgacttggaaaaacacaaacagaag
aaggaaaagaaaaggagagagaagcaacttcttgagagaagttatgaagaagaatacgtc
gaagaattcttagatgaagatggacaagttgttagagttgtcaaaaagagactgaaaggc
caaacattaccaggcagacgtccaactacacctcttactggaccaagacgtgtccaagtc
ctatttttgaaaggtggcaaatatcttcaggacagactcaatatgcttctggaaacttgc
actctcaatactgcggatcctagaaaaaggcttcgacccatcagtgcctctagtgacgag
ggagcgttagatcttgatgaaagagatggcaggatagattatctatctcactaccgactt
gtagaaccagagaaactggaaacctacggtaaagcctttgtcgtggaggacacagacgaa
aacaatgtcttgaatctgaatgaaaccaaggttgccttggaaggcattccgactttacaa
ggattaagtcccagacagatgcattatatattgaaaattctcggaattgatgatgcaact
ctcgttactttcaaaatgtttgccgttgtctgtgctttgtgtgaaagattgcttgaagtt
gttgatgaacagactaagcagtggatggagattgatgatttgatggatttagaaaggaaa
ctagatctttacagacaaatgttttattggaatatctgctcggacagaagttctaactac
attaaggcctcatcactcagagtcgagctgattgctggaggagtgagtcgaagacaggaa
gatgaagttatggcgaggattgaaaccaacatttatagagaggtatctttcttagactac
atggcgttcgttcctttatttctctgtgctcacgagaacattgtagaaaatccactggat
aattcgagagacaaattcactggagagaaagaaaaaacactcatacctgaaaaagacatg
gttcctcttggaaggcagatgtcaaggaaagctgcattgagcatgggatctataccaata
ccttacttatttgagaagaggccaggttcatcattacgaaagcgaatcaggctctgtcta
cccaaaccaccaattgaggaggtaggaacaccggactctatggcgacacctataatgtca
cctgttccccccaaagtcagcagattagaagctttaaagaaacgaatgaaactatga
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integrated database retrieval system
