Styela clava (leathery sea squirt): 120339741
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Entry
120339741 CDS
T07291
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04120
Ubiquitin mediated proteolysis
sclv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120339741
04120 Ubiquitin mediated proteolysis
120339741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sclv04121
]
120339741
Enzymes [BR:
sclv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120339741
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120339741
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-rbx1
zf-RING_2
zf-C3HC4
zf-RING_16
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_2
zf-RING_11
zf-C3HC4_3
zf-RING_Vps41
zf-RING_5
zf-RING-like
zinc_ribbon_16
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
120339741
NCBI-ProteinID:
XP_039263865
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MKMRGALLTAGSFALTGAVVANAWIQKKQFFPTVVYLTKSSPCMAVLYIQAFVFVLLLGK
LMRKVFFGQLRPAETEHLIERSWYAVTDTCLAFTMFRDDFSPRFVASFTFLLFLKCFHWL
AEDRVDYMERSPIITLLFKFRVLSLLSLLSILDAYFVNSSYETTLSKGASVQLVFGFEYA
ILLTVLLTITLKYILHSIDLQSENPWENKAVYMLYVELVTGFLRVILYTCFTAIMIKIHT
FPLFAIRPMYLTMRQFKKAVSDIVLSRRAIRNMNTLYPDATAEDLAEGDSTCIICREEMQ
PPQPGAQPGNRRNTAGINKKLPCSHIFHAACLRSWFQRQQTCPTCRLDVLVSVPTTTPAP
PQAAPPPQPGHPNVPPGMVPPVPGQNPFMFPPMFPPPGMFHHPPHQQQPVPPPAAGNAQQ
APGSSSSTQPSTSSSVPPHPATNIPSPFMFMPPLPTMMMPPPPMPPGNYSGMSDDQLRAM
EGMERRAVENRLECLRNINSLLDAAMLQITQYVTVVRGQGQQGFQIPPFDPSQLPKQTTP
EAVPPEEVVTSSQSFSANITSTTQPQAQPTEESDNIPGTSGISEIISEQTDIKEPLQVAH
TATVSGENEVVEPEDANELRRRRLAKLDSAKNLQEMNNDTPGTSS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgcgtggtgcgttgttaactgctgggagctttgcgctcactggagcggtcgtt
gcaaatgcatggatacaaaagaaacaattctttccaactgttgtatatttaacaaagtct
agtccttgcatggcggttctttatatccaggcatttgtgtttgttttacttttgggaaaa
ctaatgcgaaaagtattttttggacaacttcgtcctgcagaaacagaacatctcattgag
agatcttggtacgctgtaacagacacatgtcttgcgtttacaatgtttcgtgatgacttc
agtccaagatttgttgcttcattcactttcttactttttttaaaatgttttcattggtta
gcagaagatcgtgtcgattatatggaaagaagtcctataataacactcctttttaaattc
agagtattgtctctgctatctttgctttcaatactcgatgcatattttgtcaattcatct
tatgaaaccacattaagcaaaggtgcttcagttcaattagtttttggcttcgagtacgcc
attcttttaacggttttactcacaataactttgaaatatattcttcattcgattgacttg
caaagtgagaatccctgggaaaataaagccgtatatatgctttatgttgaactagtaaca
ggtttccttcgtgtcatattgtacacatgctttaccgcaatcatgatcaagattcacact
ttcccgttgtttgcaatacgacccatgtatctcactatgaggcaatttaagaaggcggtt
tcggatatcgtcttgtcaagaagagccatcagaaatatgaacacactgtacccagatgca
actgcggaagatttagcagaaggtgacagcacctgtattatttgcagagaagaaatgcaa
ccaccacaacctggcgctcaacccggaaatcggcgaaatacagcaggcatcaacaaaaaa
ctaccatgcagtcacatcttccacgctgcttgcctacgatcttggtttcaaagacaacaa
acatgcccaacttgccgtcttgatgttttagtatcagtgcccacaaccacaccagcgcca
ccacaggctgctcctccacctcaacctggtcatcctaatgttccgccaggaatggttcca
cctgtacctggtcaaaatcctttcatgtttccacccatgttcccaccaccaggaatgttt
caccatccaccccatcaacaacaacctgttcccccacctgctgctggtaatgctcagcaa
gcacctggttcttcttcaagcactcaaccttccacaagttcatcagttccaccacacccc
gcaactaacattccttcgccgttcatgtttatgcctccactacctacgatgatgatgcca
ccaccacctatgcctccaggaaactatagtgggatgtcagatgatcagttaagggcaatg
gagggaatggaaagacgagctgtggaaaatagactggaatgcttgagaaatattaattcc
ttgcttgatgcagcaatgctccaaatcacacagtatgtcactgtggtgagaggacaagga
caacaagggttccaaattccgccgttcgatcctagtcagctacctaagcaaaccacccct
gaggccgtacccccagaagaagtggtaacctcatcgcaatctttctccgcaaatattact
tcaaccactcagccacaagcacaacccacagaggaatctgataatattcctggcacgagt
ggaatttcagagataataagtgagcagacagatataaaagaaccattacaagtggcccac
acagctacagtgtctggcgagaatgaagttgttgaaccagaagatgcgaacgaacttcgc
aggcgacgattggcaaaactagattccgcgaaaaacttgcaagaaatgaacaatgatacc
cctggaacttcctcataa
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