Styela clava (leathery sea squirt): 120339823
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Entry
120339823 CDS
T07291
Name
(RefSeq) recQ-mediated genome instability protein 1-like
KO
K10990
RecQ-mediated genome instability protein 1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
120339823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sclv03400
]
120339823
DNA repair and recombination proteins [BR:
sclv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
120339823
FA (Fanconi anemia) pathway
120339823
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RMI1_N_C
RMI1_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
120339823
NCBI-ProteinID:
XP_039263960
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MSTSTNAISAWFKSKHISVPNDWVSACLEWLQSENSNTTDPTTIRNLVYEQWLLTDLRDF
GEGCLPSEITNDAYTLKGIYCVQIDNVLDVSQPKYSQLLQRQNKENSNMFVCAETQATQK
PWEAKPSRMLMMSITDGVQEISGMEYTQIPKINEKITPGTKITIQGPVICRRGVMMLKQN
NIDILGGEVEDMFQSCNYEAMLCRGLNRPIPTNPTAQTNISEANTRNETPQNRTINVANP
GQRNLLGSGNQSRNQPNSRNENARNRTNVANSNQSGHGNYIQNRTINTKTNQRRVLGSFE
NQAQSSSRDVDVDFDDAELDQIMADADFDDSMDDAVLSSLVSTHFEDTGSCNQKDCVTSS
TSTIKNIGGKKFDIITISDDEEGIDDLLADADLDKHLVNNTNEQQATNSTNIGINNPKVP
KLSNSAIIKKESKMLYQKQAMPGCSSLEKQAINSSNFGSKNTEVSKLSNSVIIKKESETL
HQKQAMPGSSLFQKPTKSDPNSMQRGASGNFPQPSKTNISYKQEYRPSQHTEFISPKKLS
THTNRDEASALLMSDDNMEIFDDDIPVLNSRNETKLKPKSHHIQASTIPQVKPSYTLNSV
VKKDPECPETNQMDYLCQAKVFLSKYQGRKEINVRSKCIVVTLLSKLRSDAFIGWGLKAR
ICDGTDTLDAEFSNEVLRKLIGFTVPEAEAVKASQNTQQREKLKAGMQNCRATIISMCHF
MNIKIFKTATSSTESFITSIEL
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacttcaacaaacgctatttctgcctggtttaagtcaaagcatatttcagttccc
aatgactgggtttcagcatgtttggaatggttgcaatctgagaattcgaacactactgat
cctacgacaatcaggaatttagtttacgagcaatggcttttgactgatttgagagacttt
ggagaaggatgccttccttctgaaatcacaaatgatgcttatactttaaaagggatttat
tgtgtccaaattgacaatgtattagatgtttcacagccaaaatactcacagttattacaa
agacaaaataaagagaactctaatatgtttgtgtgtgcggaaacgcaagcgacacaaaag
ccatgggaagcaaagccttcacgaatgctaatgatgagcattactgatggcgtacaggaa
atatctggtatggaatatacccaaataccaaaaataaatgaaaaaataacccctggtacg
aaaataactatacaaggacctgttatttgtagacgtggagttatgatgttgaaacaaaat
aatattgatatattaggaggagaagtggaagatatgtttcaatcatgtaactatgaagct
atgctttgtagaggattgaacaggcctattccaacaaaccctactgctcaaactaacata
tcggaggcaaacacgagaaatgaaacaccacagaatcggacaattaatgttgcaaatccg
ggacaaagaaaccttctaggctctggaaatcaaagccgaaatcagccgaattcaagaaat
gaaaatgctcgaaatcgaacaaatgttgcaaattccaaccaaagtggtcatggaaattat
attcaaaacagaacaataaatacaaaaaccaatcagcgaagagttcttggtagttttgag
aatcaagcccaatctagttcaagagatgttgatgtagatttcgatgatgctgagttggat
caaatcatggccgatgcagattttgatgattctatggacgatgccgtactttcaagctta
gtttcaacccattttgaagataccggatcgtgcaatcaaaaagattgcgtgacgtcatcg
acttctactatcaagaatattggtggtaaaaaatttgatattatcacaatttctgacgat
gaggagggtattgatgacttactagcagatgcagacttggataagcatttggttaataat
acaaatgaacaacaagctacaaattcaaccaacattggcatcaacaatcctaaagtacct
aagctatcaaattctgccataataaagaaagagtcaaaaatgctatatcagaaacaagcg
atgccgggttgcagttcacttgaaaaacaagcaataaattcatccaattttggcagcaaa
aatactgaagtaagtaagttatcaaattctgtcataataaaaaaagagtctgaaacactc
catcagaaacaagcaatgccaggttctagtttgtttcagaaaccaactaaatctgatcca
aattcaatgcagcgtggtgcctcaggaaactttcctcagcctagtaaaacaaatatctca
tataagcaagaatataggccatcacagcacacagaattcatctcgccaaaaaagttatca
acacatacaaatagagatgaggcctcagcattattaatgtcagatgataatatggaaata
tttgatgatgatattcctgttttaaactccagaaatgagacaaagttaaaaccaaagtct
caccatattcaagcttcaactataccacaagtgaagccatcgtatacattaaattccgtc
gtaaaaaaggatccagagtgtccagaaactaatcaaatggattatctgtgtcaagcgaaa
gtgtttttatcaaaatatcaaggccgaaaagaaatcaatgttcgttcaaaatgcatcgtc
gtaactctattatcaaagctaagatctgatgcttttataggctggggattaaaagcaaga
atctgtgatgggacggacacattagatgcagaattttcaaacgaagttttgagaaagtta
ataggatttactgtcccagaggcagaggctgtgaaagcgtcacaaaacactcaacaacga
gaaaaactcaaagctggaatgcaaaattgcagagcgactataatttctatgtgtcatttt
atgaacattaaaatttttaagactgcgacttcttctactgaaagttttatcacaagcatt
gagctttaa
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