Styela clava (leathery sea squirt): 120339856 Help Entry 120339856         CDS       T07291                                  Name (RefSeq) protocadherin-18-like   KO K16499   protocadherin delta 2 Organism sclv  Styela clava (leathery sea squirt) Brite KEGG Orthology (KO) [BR:sclv00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:sclv04515]     120339856 Cell adhesion molecules [BR:sclv04515]  Cadherins   Protocadherins    120339856 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_2 VWA_3_C Glycophorin_A Syndecan TMEM154 SIT DUF5337 Gram_pos_anchor EphA2_TM Motif Other DBs NCBI-GeneID:  120339856 NCBI-ProteinID:  XP_039264001 LinkDB All DBs Position Unknown AA seq 1229 aa AA seqDB search MKNTIVIVATELLILISVFRQVVSKNNKVTEYVSEEEPKGTIVANMAKILSLRYDERAGR SFKLLSQNLITKSPSSTLKGVELITLNEETGVMTLAEKIDREKICRKAEECIIQIQAVML PQKHFSMLNLDIKIGDINDNPPKFFARKINITLPEAETFINDVINLDKFQAHDKDIGLNS EILYTLTGNPYFTIIQYGDEAGNPHLGLKVLKMPDHELETLHRMTLYAADRGEESLTDHV PLFVTIADSNDHDPIFDQQDYSIYLEESTKVSSLITTVHATDLDSGDYGRIRYFVVPPTP RTIEQLVSVDPENGEVRLKKKLDKEIHDGLRILIQAKDSDPVKPRVGKAWLRIFVEDVND NNPVINVNFIVDAKNKTGYIQESAGVRTFIAYVDATDEDEGLNGDVGLKIKSFGKKKQAR NYKEVTGEFILSQDGLLSTGRLLDRETYQQYIIEINACDKGSPRRCTFNNITVVVLDVND NSPVFDIPSKTVVLPEDSEVGVTVTGVSAFDADAAYPPSLWLRNKKVEPSMNGVITYSIA GGDTNYFNIGERSGNIKLGKKLDHETQSIWKLIINARDGGWPKYRDANCTVIIRVGDIND NRPIFKNPKYNNSKHYATILKDQPIMIVQAEDRDNGINSKIQYRIIEEDGIKSGGKQPLS GLFIVNPTTGTLRLNFSKSNLTNFLGWHHITIKASDSASSPLSVVTAIQLKVTNEIVPNP LTQAGIEPKFIAIVIILAIAALILMILIVVTLLRRRKKKQLQTYNCKSAKSRARHWLSSP SQNKTGSDTQGCLEPGNTLESAYSDVAYNMQPYGQGNESTATRNFVPESNEVARNKFASH GKASNSSLILPVVRSLDLDSGRGDSGSENENNDFDANEAGPHVQPHNQTRENVSRSYNFH DDADSSRTSELGPRCEESCREYGHSDSCWLPSPNRDSYCAPILPCPGTLRYTAPPSQHLF HYNCIDYQDTRVSESISRIPGDRYSTAPTEYFQTLPARNGQASNLYYHGYDGDLETIDEG APLGVRIYEGIDTYDVDDVSSQTHLNLSTSLNHSNDIIAPTQPASSRTSALYYISGRPKN SPYRLAPDWEQKKYKTISNVQRTRQSSSLSDLPHPKSELRYTPTFRPLAPSPGSEVRSHI STSSSENSNKARVTLNDVQFTPKEESYESKNFERRGSCDSRIPVIQPSFRSSLAQTRNSI VIADPSNKGTVSIQEAQEIVDDIDKLLLN NT seq 3690 nt NT seq  +upstreamnt  +downstreamnt atgaaaaacactatagtaatagtagctacagaattgttgattctgatatcagtttttaga caagtcgtttcgaaaaataataaagttacagaatatgtgtctgaagaagagcctaaaggt accatcgttgcaaacatggctaaaatattgagcttaagatacgatgaacgagctggaaga tctttcaaacttctcagtcaaaacctaatcacgaaaagtccgtcaagtactttgaaaggg gtggaactgatcaccttaaatgaggaaacaggtgtaatgacgctggcggaaaaaattgac agagaaaaaatttgcagaaaagctgaagaatgcatcattcaaattcaggccgtgatgctt cctcagaaacattttagtatgttgaatttggacattaaaattggagacataaacgacaat ccgccaaagttttttgcaaggaaaataaatattactctccccgaagctgagacttttata aacgacgttataaacttggacaaatttcaagcacatgacaaagatattggactcaatagt gaaatcctttataccttgactggaaatccgtatttcacaattatacaatatggcgacgaa gcaggaaacccgcatttggggctaaaagttttaaaaatgcctgatcacgaacttgaaaca ttgcatcgaatgacattatatgcagcagatcgaggagaagaatcactcactgatcacgtg ccactgtttgtgacaatcgcggattctaatgatcatgatccaatatttgaccaacaggat tattcgatatacctcgaggaaagtacaaaagtatcaagcttgatcacaactgttcatgct actgatcttgatagcggagattacggtcgaattcgatattttgttgttcctccgacgcct cgcacgattgaacaactcgtctctgtcgatcctgaaaatggggaagttcggctgaagaag aagttggacaaagaaattcatgacgggttaagaatattaattcaagcaaaagattcagat ccagtaaaaccaagagtaggtaaagcatggcttcgaattttcgtcgaagatgtcaatgat aataatccagtaataaacgttaactttatagtggatgcaaaaaataaaacaggttatatt caagaatcagctggagttcgaactttcattgcgtatgttgatgcaacagacgaagacgaa ggtttaaacggggatgtcggactaaagataaagtcattcgggaaaaagaaacaagcaaga aattataaagaagtaacaggagaattcattttgtcccaagatggtttgctttcaactggt agacttctcgatagagaaacgtatcaacaatatatcatcgaaattaatgcatgcgacaaa ggatcacctagaagatgtactttcaacaacatcaccgtagttgttctcgacgtaaatgac aattctcctgtgtttgatattccttcaaaaaccgtcgttcttccggaagatagtgaagta ggggtgacagtaacaggtgtatcggcatttgacgcagatgctgcctacccaccatctctt tggttgaggaataaaaaagttgagccatccatgaatggtgttattacttattcaatcgct ggaggtgatacgaattacttcaatattggcgagagatcgggaaatattaaacttgggaaa aaattggatcatgaaacacaaagtatttggaagttgataatcaacgctcgtgacggaggt tggccaaagtatcgcgatgcgaattgtaccgtgataatacgtgttggtgacattaatgac aatcgaccgattttcaagaatcctaaatacaataattctaaacattacgcaacaattctg aaggatcaacctatcatgatagttcaggctgaagatcgagacaatgggatcaattctaaa attcagtatagaattatagaagaagatggaataaaatctggaggcaaacaacctttgtct gggctgtttatagtcaatccaacaacgggaactctgagacttaacttcagcaaatctaat ttaacgaatttcttaggatggcatcacatcaccatcaaggcaagtgattcggcatcatcg cctttatcagtggtaaccgcgattcaattaaaagttacgaatgaaattgtaccaaaccct ttaacacaagccggtattgaacccaaattcattgcaatcgtaataatcctggcaattgcc gccttgatattgatgatattgattgtcgtgactctacttcgccgacgaaagaaaaaacag ctgcaaacgtacaattgcaaatcagcaaagtctcgagcaagacattggttgtcatctccg tcacaaaataagacgggatcagatacgcaaggatgtttagagcctggaaatactcttgaa tctgcttattccgatgtggcctacaacatgcaaccatatggacaaggcaatgaatctaca gctacaagaaattttgtaccggaatctaatgaagtggcgagaaataaattcgcatcacac ggaaaggcaagtaattcatctttaatattacctgtcgtaagatctcttgatctggacagt gggcgaggagacagtggatctgaaaatgaaaataacgattttgatgcgaacgaagcaggt cctcacgtgcaacctcataatcaaacaagagaaaatgtttctcgctcatataattttcat gatgacgcagacagttcacgtactagcgaacttggtccccgatgcgaagaaagctgtaga gaatacggacacagtgatagctgctggctcccatccccaaacagagattcatattgcgct ccaattcttccatgtcctggcacattacgatacacagcaccgccatcccaacatttattt cactacaattgtattgactaccaagatacacgagtttcagaaagtatatcaagaatacct ggagatagatactcaacagcaccgacagaatatttccaaacactgccggcgagaaatgga caagcttctaacttgtattaccacgggtacgacggcgacctagaaacaatagacgaaggc gcaccgcttggtgtacgtatatacgaaggtatcgatacttatgacgttgatgacgttagc agtcaaacgcatttaaatttgtcgacatcgttgaatcattcgaatgatataatagcgccg acacagcctgcttcttccagaaccagtgctctttactacatttcaggacgcccaaaaaac tcaccatatcgacttgcacccgactgggaacagaagaagtataaaacaatatcaaacgtt cagaggacacgccagtctagtagtttatctgatcttccgcatcccaaatcagaacttcgc tacactccaacttttcgtccattagcgccatctcctggatcagaggtgcggtcgcatata tcgacttcttcatctgaaaattctaacaaagcccgtgttacactgaatgatgtgcaattt actcctaaagaagaatcgtatgagagtaaaaactttgaaaggcgtggttcgtgtgattca agaataccagtaattcaaccatcatttaggagtagtcttgcacaaactcgcaattccatt gtaattgcagatccttccaataaagggaccgtatctattcaagaagcacaagaaattgtt gatgacattgataagttattattaaattaa

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