Styela clava (leathery sea squirt): 120339923
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Entry
120339923 CDS
T07291
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4-like isoform X1
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sclv03016
]
120339923
Enzymes [BR:
sclv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
120339923
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
120339923
Transfer RNA biogenesis [BR:
sclv03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120339923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_4
Kelch_3
Kelch_2
Kelch_6
Kelch_1
Motif
Other DBs
NCBI-GeneID:
120339923
NCBI-ProteinID:
XP_039264099
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MNSEQVQGTNDSSIVSKLSMVQRGYFEDDFIKSFVEKPSRRSPLINRCYHARAAAVSYCV
EKFVTSDKDMKQIISLGAGFDTTYFRLKQKGYMKNIQYIEIDYPAVMKRKVALAKRANLI
LEDDELEHRTERELGFLIYKSEEYICLGYDLQLVGKRLHALLESVNVDFKKPTLFLSEVV
LTYLPAKNSSLVLQWIAKNFYNAVVVVFEQVNPWNSFGKVMCKHFKQIGSPLLTIDEYPT
IASQVERHCNLGLAYCNATSLDRFYYSCVPAEKRKLLENLEIFDEFEAWHEACQHYFILC
STNSESEKYKIFCKMLFEDANAIFKESLPAAVISLKPIYSVEPSVKRFGHSSSLIKVKKK
DTGQEREFIIVIGGFGIPADSLAHQRLHNNVTAVDIATGKSYKCNETDQTMDGAGVFPFP
MFGSSVACQHHEKSIILVFGGRASPLKCTNSLAFLVFSNEDLQEDCDWQYKVEVIDVKEG
ENWPAPRWRHATEIIPNNQMEKFMILFGGRDDRLIFDDMWVYDIESRKWNQLTLHGSGIS
PRHSHSVCATNDGNILLSGGIGDGNVIFADLYMIGIDTENLEASVQRIILYSLPPLFSHT
SHCYGDLLILVGGVTSHINSKFGDERERGMITVLNLQNGKSSSYTVNDISNDIIMLHNHT
SIFSVLQQTLFIVGGGDNCFSFGTWFNISPMQLIFDQSLEIH
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgaacaggtgcaaggtaccaatgacagcagcatagttagtaagctttctatg
gtacagaggggatattttgaagatgattttatcaaatcttttgttgagaaaccgtcacgt
agatctcctcttataaatagatgttatcatgcaagagcagcagccgtatcatactgtgtt
gaaaaatttgttacaagtgacaaagacatgaagcaaatcatttcacttggtgcaggattc
gatacaacctattttcgtttaaagcagaagggttatatgaaaaatattcaatatattgaa
attgattatccagcggtcatgaaacggaaggtagcactagcaaagagagcaaatctgatt
ctggaagatgatgaattagaacacagaactgaaagagagcttggatttctaatctataaa
tctgaagaatacatatgtttgggatatgatttgcagttagttgggaagcgactacatgca
ttgcttgagtcggttaatgttgatttcaagaaaccaacattgtttctctctgaagttgtg
ttgacatatttaccagccaaaaactcatcattggttttacaatggattgcaaaaaacttt
tacaatgctgtagttgtggtatttgagcaagttaatccttggaatagtttcggaaaagtc
atgtgcaaacattttaaacagattggaagtccattgctaaccattgatgaatacccgacg
attgcaagccaagtggaacgtcattgtaacctcggtttagcttactgtaatgctacaagt
ttggatcgattttactactcttgtgttcctgctgaaaaaagaaaattattggaaaattta
gaaatattcgatgaatttgaagcatggcatgaagcttgtcagcattatttcattttgtgt
agtacaaacagcgaaagtgaaaaatacaaaatattctgcaaaatgctgttcgaagatgca
aatgcaatttttaaagagagtctccctgcagcagtgatttcattgaagcctatatatagt
gttgaaccttcagttaaaaggtttggtcatagttcttcacttatcaaggtaaagaaaaag
gatactggtcaagaaagggagtttatcatcgtcattggtggatttggcattccggctgac
agtcttgcacaccaaaggctacataataatgtaacagcggttgatatagctacaggcaaa
tcatataagtgcaatgaaaccgatcaaacaatggatggagctggtgtatttccatttcca
atgtttgggagtagtgttgcttgccaacaccatgaaaaatctataatattagtttttggt
ggtagagcgtcgcctctcaaatgcacaaattctttagcatttctggtattttctaatgaa
gatttacaagaagactgtgattggcagtataaagtggaagttatagatgtcaaagaaggt
gaaaattggcctgcgccaaggtggaggcatgccactgagattattcctaacaatcaaatg
gaaaagtttatgattttgtttggaggacgagatgaccgattaatttttgatgatatgtgg
gtatatgatattgaaagtaggaaatggaatcaattaacgctgcatggaagtggaatttca
ccaagacattctcattctgtatgtgcaacaaatgatggaaatattctgttgtctgggggc
attggtgatggcaatgtcatctttgccgatttatacatgattggcatcgatacagaaaat
cttgaagcaagtgtgcaaaggatcatcttatactctctacctccgctgttttctcacact
tctcattgctatggagatttgttaatattggtaggaggtgtaacatctcacatcaactcc
aaattcggcgatgaaagagagcgtggtatgataacagtattgaatttgcaaaatggaaag
tcttcatcttatactgtaaatgatatatcaaatgatatcataatgcttcacaatcatacc
agcattttttcggtattacagcagactttgtttattgttggcggtggtgataactgcttt
tcttttggtacatggttcaacatttcacctatgcagttaatatttgatcaatctttagaa
atacattaa
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