Styela clava (leathery sea squirt): 120340020
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Entry
120340020 CDS
T07291
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120340020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sclv03009
]
120340020
Ribosome biogenesis [BR:
sclv03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
120340020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_16
AAA_22
TIP49
AAA_14
AAA_5
AAA_2
AAA_28
RNA_helicase
ABC_tran
AAA_33
Mg_chelatase
NPHP3_N
Viral_helicase1
Vps4_C
nSTAND3
Rad17
AAA_17
NB-ARC
NACHT
TsaE
Zeta_toxin
AAA_18
IstB_IS21
Parvo_NS1
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
120340020
NCBI-ProteinID:
XP_039264210
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MSFLPSFDRRLVGRVRKYMTERRRVYVDDMADDLQSIYRQDYGRRKRNGFRKLVKQIHLS
IVEERRKGNLNDLERQHMSKRRKEDSGHSSSSDSADDDECFVELSDHRLMNSSLMSLYKK
QKKSRSMPSSPYHYVDCSTPASSFFEKPSIKNTEVAPIPEIPFVKEKKDIIDAVNNDDIC
RENESPEEEKIEIDKKTFHFFDSDFVSKENSLVENNDKPTLDKKTVTKTNIPSSTRKDRR
RHRKSKKKETESKTSDGDIDIQGKDAPQKFKFQTTMVKFEDIGGNENTLREVCKLLVHMK
HPEIYKTLGVIPPCGILLHGPPGCGKSLLANAIAGELSLPMLKIAATEIVSGVSGDSEQK
LREMFEMALSSAPCIVFIDEIDAITPKREIASKDMERRIVAQLLSCLDDLSASPSQVLVI
GATNRPDSIDPALRRAGRFDREICMGIPDEKAREDILRVLCKKLKLDTEFNYLLLARLTP
GYVGADLMSLCREAAMCAVNRILSYLRQSKLDNSNNDRNFENISDKNCKMKQNSNPNIEN
ENDVIHTNDSAMELSHSSSIDAPQNQDSRVEDNHDTHNNILDLQTNMIYNDLSTFELLTW
LRETTPLTEGQLLNLSIKFSDFEHALPYVQPSAKREGFATVPDVTWDDIGALEDIREELA
VAILAPVRNPAAFKSLGLNKPPGILLAGPPGCGKTLLAKAIANESGINFISVKGPELLNM
YVGESERAVRQCFERARSSAPCVIFFDELDSLCPRRSGAESSSTARVVNQMLTEMDGLET
RKHVFVMAATNRPDIIDPAVLRPGRLDKTLYIGLPKSEDRLKILLTITKNGTKPPMHDNV
SLSSLSHDERCNRFTGADLSSLVREAAVNALKDHISAQHVFEKDSKFQSLNVVVNKEHFE
KAFAKVKPSVSNKDEHKYEAMRRELQGY
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttcttccttcatttgatcgtcgtttagtgggaagagttagaaaatatatgaca
gaacgacgtcgtgtatatgtagatgatatggcagatgacttgcaatctatatatcgccag
gattatggaagaagaaaaaggaatggattcagaaaattggtgaaacagatacatttgtca
attgtcgaagaacggagaaaagggaatttgaatgacttagaaaggcaacatatgagtaaa
agaaggaaagaagattctggacatagcagctcttctgattctgctgacgatgatgaatgt
tttgtcgaactttcggaccatcgattaatgaattcatctcttatgtctctttataaaaaa
caaaagaaatctcgttcaatgccttcttcaccatatcattatgttgactgctcaactccg
gcatcaagcttttttgaaaaaccttcaataaaaaatacagaagtggcgcctattccagaa
attccctttgtaaaagaaaagaaagatataatagatgctgttaataacgatgatatttgc
agagaaaatgaatctccagaagaggagaaaattgagatagacaagaaaacatttcatttt
tttgattcagactttgttagcaaagaaaatagtcttgtagagaataatgataaacctacc
ctcgataaaaaaactgttactaagacaaatattccatctagtacaagaaaagataggcga
agacatagaaaatcaaaaaagaaggaaaccgaatcaaaaacttcagacggtgatatcgac
attcaaggcaaggatgcaccacaaaaatttaaattccaaacaacaatggtaaaatttgaa
gatattggtggaaatgagaatacgttgagagaagtttgtaaacttcttgttcatatgaaa
catccggaaatctataaaacacttggggttattccaccttgtggtattctgcttcatggc
ccaccaggttgtggcaaatcacttctagcaaatgctatagctggtgaactatcacttcct
atgttgaagattgctgctactgaaattgttagcggagtttcaggagacagtgaacagaaa
ttacgtgaaatgtttgaaatggcattgtcatctgcgccctgtattgtgtttattgatgaa
atcgatgccataacaccaaaacgagaaattgcttctaaagatatggaacgaagaatagta
gcgcaattactttcatgtctcgatgatcttagtgcatcaccttcacaggttttagtaatc
ggtgcaaccaatagaccagactcaatcgatcctgccttgagaagggctggtagatttgat
agagaaatttgtatgggtattccggatgaaaaagccagagaggatatcttgagggttcta
tgcaagaaattgaagctggatactgaatttaattatttgcttttggcaagattaactcca
ggatatgttggtgctgatctcatgtcattatgcagagaggctgctatgtgtgctgtcaat
agaattttatcctatttacgccaatcaaaacttgacaattcaaacaatgatagaaacttt
gaaaacatatcagacaaaaattgtaagatgaaacagaactcgaatccaaatattgaaaat
gaaaacgacgtaatacatacgaatgattcggcaatggaactctctcattcaagctccatt
gatgcgccgcaaaatcaagattccagagttgaagataaccatgacacacataataacata
cttgatttacaaactaatatgatttataatgacttatctacttttgaactcctgacttgg
ttgcgtgaaactactccattaactgaagggcagttgttgaatctttccatcaaattttct
gattttgaacatgcactaccgtatgttcaaccttcggcaaaaagagagggatttgcgaca
gttcctgacgtgacttgggatgatattggagctttagaagatataagagaggagttagct
gttgccatattggcaccagtgaggaaccctgcggcattcaaatctttaggattgaataaa
ccacctggtatacttctggctggtcctccaggatgtggaaaaactcttttagctaaagca
attgccaatgaatccggaatcaattttatatctgtgaagggtcccgaattactaaacatg
tacgtaggagaaagtgaaagagctgttcgacaatgttttgaaagagcaagaagttcagca
ccttgtgttatattttttgatgaactcgattctctttgtcccagaaggtcaggagcagag
tcatcttctacggccagagttgttaaccaaatgttgacagaaatggacggactagaaaca
cgaaaacacgtttttgtaatggctgctactaatagaccagatattatcgatccagcagtt
ttgagacctggccgtttagataaaactttgtatattggtttaccaaaatcagaagataga
ttgaaaattcttttaacaataacaaaaaatggaacaaaaccaccaatgcacgacaatgtt
tccctatcgtctctttctcatgatgaaaggtgtaatagatttacaggtgcagatttgtca
tctttagttcgtgaagctgctgttaatgctttaaaagatcatatttctgctcaacatgtt
tttgaaaaagactccaaattccaaagcctaaatgtggtggtgaacaaagaacattttgaa
aaggcctttgcgaaagtaaaaccttcggtatctaacaaagatgaacataagtatgaagca
atgagaagggaattacaaggatactag
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