Styela clava (leathery sea squirt): 120340213
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Entry
120340213 CDS
T07291
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12-like protein isoform X1
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclv03021
]
120340213
Transcription machinery [BR:
sclv03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
120340213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12
Motif
Other DBs
NCBI-GeneID:
120340213
NCBI-ProteinID:
XP_039264438
LinkDB
All DBs
Position
Unknown
AA seq
2323 aa
AA seq
DB search
MTSLNSILENRALIRTRIGPPDVYPQDPKQKEDELTSVNVKQGFINQTPYFCDSGETGSA
QHYPIDITKLNRSFNDIVRQKQINNTFNDTVKKRPALTKDNFWLVPVAKNRNHLQQWIKE
LRGGKSLNYLGRRVPIFSKKEEVFQTLAENQITIVRATWYIKMTAQYGVLQAEAKNKKNR
NNVDHNPEWTASLCRFMRDQLSRLLDDPSLNNSGTSVIPQQSMEETEKHFEYISKLAHHL
YSEGMLDRHDFLNWVVETMEKIRLLGTHALSYVMPMVMKYIQDIIKNQLLSRRLAFVTSR
LLNWMLNESTWGGGNSSLSSSINNKSSNAIESPSAPMSVGPPSVSGQQSQKQLSAPPTPS
QGAKPSSPQKNGQQNSIAKPRTLPTNFPKSLEDIAHGLICIIQCITMECPGALVWYQPDD
PKTPGSPLDYLPVAPSLLPLPSTTKIESLRDNNDNLTRARLREMEADVIQRSYAAEMRWS
SDKCQESATGQTITRVLNTLEALDKQQNFDRTEPIDFIYNKIFVHNNSKDGGGNDQTSQA
GEEAVIWLLCEWAITAQRLGEHRAGVVAKLLDKRQEKIAHEREQAAMMSSKLFNSSGTAT
SSSNPGSVGTPLLSPPPQLLVEGMEPPQNDTRASVQPPTQQNLVVNNNPHMFQAILFNFL
DTQAPLLDNPSDMKELQSFKNLVVLFSELIQHDVFSHDEYVSALISRGDITPGQISPLPI
YIPTSGPSSNTTTIGYTNHSVGVMSVASVGPTSVGPSSNKPLDMLLKSDADDELPSSVRS
IDPKNDSDLVLFSPVNNSDILMSPDGRNMAERHFTDVIKEIPDNSKDKNGGLGLGMQMKR
PTGPIWGYRQPRHVQFLMHFPISFEDDESIHESNQRLMVLYGAGRQRNEVKKAVKKITKY
VCKLVQKRSITSPAENSFCIPSTKVPSVGGSKKSKNRTTNDLSLSSSSNSQSPDMLLKRF
RCLSYFDQHYITTQASKAILTSFSDYVSERSQNLPLMNSITLVLNLMEEALNFGGIVQLA
VQISSVLTSLETEISRRHPTFAGCYTKDLALNIVSVLRHYQSYLTLDIDLTRQAFDAMHS
FIKQSNITNPGHCTSPDRCVLIFLYDLFTSFRSKYLLLESQVQKFSSFASVIRQTLCQSK
IPAKSNCKYDNTFLIEYIENPNSMHPLIVARQNCILMREATYKYSFVCSVIITMCTGQNN
PESLSSIATLCAEMNAQCNDLSSEWLGVLKALCCSSTTANSANFTDVLIHVEQAVDDNIH
DPLALFTAILIARNCLSMENFIKHVAIPSLLAACPSRPGLNVSEAETGARLTCHILLQLF
KTPLHPSQINNSSETSGNEQRPPFYIPEASDRHLLAASQRNIVVGAVLAVLKAIVKLGDA
SFGGGRSSSPAEKENSVSSFFLPIRQTMDDDDFGLGGPLRSTMSSGDSMDTPSLSDFAKN
AVRVICSQQWVRERCLKIIEWDLLMDKELTQGQRQNLIQLICCPEEELQRLSETPHNQRS
YVLQVLHRMSRWTLRQTLLELQIMLKQAGEDQTLSEDIAKAVIEVFKEQNTEPTKDRKSP
ITGIELDRSNVWLMPPLISELSSEVQAKVLHEASVILETSQHWSRTKPDRDRNSGRNPAS
LLSQQPFLTLILTCLKVQAEQRDSLLESLQSQILMFHSEWQSGRQQQQRDGSNSQDSTMT
QSMVQEALQLRLSLMGGMFDTVQTSLRWINSVVMLLTQLISSGMVDIEVNAKLFNIVFDM
IAVLLHGTLGGDSPNSGEGRKKNEYLLIVKRIGKEISDGKTASLKILRRLLTVPRKETFV
IACEASASSGSERQGLQVASKQKITPWDIIEGLKISAPLSLPWYGAAKTERKELPYLIQQ
RLMMFHSHEEWQVPLEEYLKPPELPPEEEEKPPTPKVNKRKTQQSTSNLKSPSAAPYGPK
DALHPPAKKQRVNSKIKQRPSKKSQELSSPYPSRAMSNMPGIYNTNMVQGGIGMQASQSI
RSSVPGYGTNQHQSGYNVFAPPQPPLHPGVSSNQPFNISHPGMQHKGNSSIKRDLANFII
NKSGQQQQRYPRPTNPIHTQNVYNMHNAQQSTENSRIAIRSMIRGRTNMTGMQNDIGQQL
SYRARQSTQMGPPMSTLRSINNPAQQSQIGGYGNYVNTQGGGMNQMHMMRGAPSYNSYQG
GGGSTQQQGYHQSMPNQSYINQQQNTGMNQGYSMSNMGQMQGGGGMNQQSSYNMGGGMQI
QNQSMMGGGQQPPQYGGMMAQQGQGRTMNRINQHQMNAGSQGMGGMQQIQGMGGGQNSIN
QSMGRPMQMVNQGLNSEHVPQQQETAQLVKMLRGKNTNNRWYV
NT seq
6972 nt
NT seq
+upstream
nt +downstream
nt
atgacttcattgaatagtatattggaaaatagggcactcattcggacgaggattggacca
ccagatgtttatccgcaggatccaaaacagaaagaagatgagcttacctcagtcaatgtg
aagcaaggtttcatcaaccagactccgtatttttgtgatagtggagaaactggctctgca
cagcattatccaattgatatcacaaagttgaatcggagtttcaatgacattgtgagacag
aaacagatcaacaatacgttcaatgacacagtgaagaagagacctgcgttaaccaaagac
aatttctggctggttccagtagcaaaaaacagaaatcatcttcaacaatggatcaaagaa
ctacgaggtggaaaaagtctgaattacttgggaaggagagttcccatcttcagcaagaaa
gaagaagtttttcagacattagcggagaatcagatcacaattgtgcgtgcaacatggtac
atcaaaatgactgcacagtatggtgtcctgcaagcagaagctaagaataagaaaaatcga
aacaatgtcgatcataatcctgaatggactgcatcgttatgcagatttatgcgagaccag
ttatcaaggttattggacgatccatctctcaataattctgggacttcagtgattcctcaa
caaagcatggaagaaacagaaaaacattttgaatatatttcgaaactggcacaccatttg
tactcagagggtatgttggacagacatgattttcttaactgggttgttgaaacaatggaa
aaaatcagattacttggcacgcatgcactaagttatgtaatgcctatggtcatgaaatac
atacaggacatcataaagaatcaacttttatcaagacgacttgcttttgttacaagtcga
ttgttaaactggatgttgaatgaatcgacgtggggtggtggtaattcatccttgtcatca
tctattaataataaatcatcaaatgcaattgaatctccctctgcacctatgtcagttggg
ccaccatctgtctctggtcagcaatcacagaagcagctttctgctcctccgactccgagt
caaggtgccaagccctcgtcgcctcaaaaaaacgggcaacaaaactctatagcaaagccc
cgtactttgccaacgaactttcctaagtcgttagaagacattgctcacggacttatatgc
attatacaatgtattacgatggagtgccccggcgcgcttgtttggtaccaaccagatgac
ccaaagacccctggatcacctttggactatttacccgtcgctccgtctctcttacctctg
ccttccacaacgaaaattgagtcattaagggataataatgataatttaacgagggcgagg
ttacgtgagatggaagccgatgtaattcaacgttcctacgctgctgaaatgagatggtca
tccgataagtgccaagaatctgcgaccggtcaaacgataacgagagttttgaatacgtta
gaagctctcgataaacaacaaaattttgatcgaactgaacccattgattttatttataat
aaaatttttgttcataataacagcaaagacggtggtggcaatgaccagacgtcacaagct
ggtgaagaagctgtcatttggctattatgtgaatgggccataacagctcaaagactcggc
gaacatagagctggtgtcgtagccaaacttcttgataaaagacaggaaaaaattgcgcac
gaacgggagcaagccgccatgatgtcatccaaactttttaattcatctggtacagcgact
tcaagttcgaatcccggttcagtcggcacaccgttgttgtcacctcctcctcaacttctt
gtagaaggaatggaacctcctcaaaacgacactcgagcctctgtacaaccacctacgcaa
cagaatttagtcgtcaataataatccacacatgtttcaagctattttattcaattttctt
gatacacaagccccacttttagataacccttcagatatgaaagaacttcagtctttcaaa
aatttggttgttttattttccgagttaattcaacatgatgttttttctcacgatgagtat
gtcagcgcactcatatcgagaggagatatcactccaggtcaaatttctcctttgcctatc
tatataccaacgtccggtcctagttcgaacacaacaacaatagggtacacaaatcacagt
gttggagtgatgtccgttgcttctgttggtccaacgtccgtcggaccttcaagtaacaag
cctttggacatgttgttgaaaagtgacgcagatgatgaactaccttcatcagtaagaagt
atagatccaaaaaatgacagtgatctagtattattctctcccgtcaataactctgatatt
ttgatgagtcccgatggaaggaatatggctgaaaggcacttcacagatgtcatcaaagag
attccagacaattccaaagacaagaacgggggcttgggactcggaatgcaaatgaaacga
cccactggtcctatttggggttacaggcaaccacgacatgtgcaattcctcatgcacttc
ccgatttcattcgaggatgatgaaagtattcacgaatcaaatcaacgcctaatggtatta
tatggtgccggcaggcagagaaacgaagtaaagaaagctgtgaaaaagataacaaaatat
gtttgtaaactcgttcagaagaggtcaatcacttctcctgctgaaaatagtttttgtatt
ccgtcaactaaagtgccaagtgtcgggggttcgaagaagtcgaaaaatcgaacgacaaac
gacttatcattgtcttcatcttctaattctcagtctcccgatatgttattgaaacgtttt
cgttgtttatcgtactttgaccagcattatataacaacacaagcttcgaaagccatttta
acatcttttagcgactatgtatctgagaggtctcagaatctgccgctcatgaacagtatt
acattggtgcttaatttaatggaagaagcattaaattttggcggaattgtccaactcgcc
gttcaaatatcttctgttttaacatctctggaaacagaaatatcaagaaggcatcctaca
tttgcaggatgttacaccaaagatctcgccctcaatatagtatctgtattgaggcattac
caaagctacctcactctcgatatcgatttaacacggcaagcgtttgatgccatgcattct
ttcatcaaacagtcaaatattactaatcctggccattgcacttcgccagacagatgtgtt
ctaatttttctctacgatttatttacatcgtttcgttctaaatatttgcttttggaaagt
caagtacaaaagttttcaagttttgcatcggtgattcgacaaactctatgtcaatctaaa
atacctgccaagtcgaattgcaaatatgataacacgtttctgattgaatacatcgagaat
ccaaattcaatgcatcctctgatagttgcaagacaaaattgtatattaatgcgagaagca
acgtataaatacagttttgtttgtagcgttattataactatgtgcacaggacagaataac
cctgaaagcctcagttcaatagcaactctatgtgctgaaatgaatgctcaatgcaatgat
ttgagttcagaatggctcggagtattaaaagctttatgttgtagctctacgacagccaat
tccgctaattttactgacgtcttaatacatgttgagcaggcagtggatgacaatattcat
gatcccctcgctttgtttactgccattttaatcgctcgaaactgcctttcgatggaaaat
ttcatcaaacatgttgctattccgtcactgcttgccgcttgtccaagtcgacctggactc
aacgtgtcggaagctgaaacaggtgctcgcctcacttgccatatacttcttcaacttttc
aaaaccccactgcatccttcgcaaataaacaattcttccgaaacatctggaaacgaacaa
agacctcctttttatattcctgaagcttcagacaggcatttattggccgcttcacaaaga
aatatcgttgtcggggcagttttggccgttctaaaagcaattgtaaaacttggtgatgct
agtttcggtggtggtcgatcgtcatctcctgcggagaaagaaaacagtgtttcgtcattc
tttttgcccataagacagactatggatgatgatgacttcggacttgggggacccctaagg
tcaactatgtcttctggagattccatggacactccgagcttaagcgattttgcaaagaat
gcagttcgtgtcatctgctcccagcaatgggttagagaaaggtgtctaaaaataattgag
tgggatctactcatggataaagaacttactcagggtcagagacaaaatttgattcaactc
atttgttgtccagaagaagagttgcagcgattgtccgaaacacctcacaatcaacgatcg
tacgttttgcaagtacttcataggatgtctcgatggacgttacgacaaactttacttgaa
ttacaaatcatgttgaagcaagctggtgaagatcagactttgtcagaggatattgcaaag
gctgtaatagaagtattcaaagaacaaaataccgagccaacgaaagatagaaaatctcct
ataactggaatagagcttgatagaagtaacgtctggttgatgcctccacttatcagtgaa
ttatcatctgaggtgcaggccaaagtgttacatgaagcaagtgtaattctggaaacatca
caacattggtcgaggacaaaaccggacagagatcggaattctggtcgaaatcctgcttca
cttttaagccaacaaccatttttaactctcattctgacttgccttaaggttcaagcggaa
caacgagattctcttctcgagtctttacaatctcagatactcatgtttcactcggagtgg
cagagcggtagacaacaacaacagagagatggttccaactcacaagatagtactatgaca
cagtcaatggttcaagaagctttgcaattgagactaagtctaatgggaggtatgttcgac
actgtgcagacaagcttacgttggataaatagtgttgttatgttgctgactcaacttata
tcatctggaatggttgatatcgaagtcaatgcaaaactattcaacattgtgttcgacatg
atagctgtgttattacatggaacgttgggtggtgattcacccaacagcggagaaggaagg
aagaagaatgaatatttgttaatcgtaaagagaatcgggaaagaaatcagtgatggaaaa
accgcgagtttgaaaatcctgcgacgtctcttaactgtgcctcgtaaagaaacattcgtt
attgcttgcgaagcttcggcgtcttcaggaagtgaaagacaaggcttgcaggttgcttca
aaacagaaaattactccgtgggacattattgaaggtttaaaaatatctgctccacttagt
cttccttggtatggagctgccaaaactgaacgcaaggaattgccgtacttaatccaacaa
cgcttaatgatgtttcacagtcatgaggaatggcaagtgcctttagaggagtatttaaaa
cctcccgaactgccgccagaagaggaagaaaagcctccaactccaaaagttaacaaaagg
aaaactcaacaaagcacttccaatctcaaaagtccatcagctgctccatacggccctaaa
gacgctcttcatcctcccgctaaaaaacagagagtgaacagtaagatcaagcaaagacca
agcaaaaaaagccaagaactttcttcaccgtacccgtcacgggccatgagtaatatgcct
ggaatatataacactaacatggtgcaaggtggtattggaatgcaagcaagtcagtcaata
cgctcatctgtaccagggtatggtacgaaccaacaccaatctggttataatgtgttcgca
ccacctcaacccccactccaccctggggtgagctcaaatcaaccatttaacatcagtcac
cctggtatgcaacacaaaggtaatagttcaatcaagcgagatttagccaactttattata
aataaatctggacagcaacaacaacgttatccacgaccaacaaatccaattcatacacaa
aatgtgtacaatatgcataatgcgcaacaatcgacagagaattcaaggatcgctatcagg
tctatgataagagggcgtactaatatgacaggaatgcagaatgacattggccaacaattg
tcgtatcgagcgagacaatcaacacagatgggtccacccatgtcgacattacgttctatc
aacaacccagcacagcagtcccaaattggtggatatggaaattatgttaatactcaaggt
ggcggtatgaaccaaatgcatatgatgagaggagctccaagttacaattcttatcaagga
ggtggtggatcaacacaacaacaaggttaccatcaatctatgccaaatcagtcctatatc
aaccaacaacaaaacactggaatgaatcaaggctattctatgagtaacatgggacaaatg
caaggcggtggtggcatgaaccaacaatctagctataatatgggaggtggcatgcagata
caaaaccagtctatgatgggtggcggacaacaaccgcctcaatatggaggcatgatggca
caacaaggacaaggacgtactatgaatcgtataaatcaacaccaaatgaacgcagggagt
caaggcatgggtggaatgcaacaaatccaaggtatgggtggaggacaaaattctatcaat
caatcaatggggagaccaatgcaaatggtgaatcaaggtcttaattcagagcatgttcca
caacaacaagaaactgcccaattggtaaagatgctgagaggtaaaaataccaacaatagg
tggtatgtataa
DBGET
integrated database retrieval system
