Styela clava (leathery sea squirt): 120340219 Help Entry 120340219         CDS       T07291                                  Name (RefSeq) protein PAT1 homolog 1-like   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism sclv  Styela clava (leathery sea squirt) Pathway sclv03018   RNA degradation Brite KEGG Orthology (KO) [BR:sclv00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     120340219  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sclv03019]     120340219 Messenger RNA biogenesis [BR:sclv03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      120340219   mRNA degradation factors    5'-3' decay     Decapping complex      120340219 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 GRA6 Motif Other DBs NCBI-GeneID:  120340219 NCBI-ProteinID:  XP_039264448 LinkDB All DBs Position Unknown AA seq 885 aa AA seqDB search MSDPFFFASKSQFRKDDSRRNIDLLNDETFGSGAVDDNWEDEHNQFVEQNSRGSSLSAVG RMEDYLDEDELELSNQQLAAAVEELVLNSDQDQDAIDPAIVSLRKESRMGSYDPRLTEDL ISPYMGERNNFGRITPTYSSQNSSSSSASLFQTDGLRNIWSNTDLEVQDSLTKSPSMILE RQMLNEKLKKMMTKTTSPEFEDEAILSAVKANPMPQSWPITSQSEDLLRHMFAQKQPMLR AEDLEREFSGSQLRGPSPTFGISIPKDNDLNHNGMDRSLPARSVSPIIGSPTSHALPIGT PPKHIADMMHQAHKQGLGGPHPGFPLLQRPQGFMVPPGRAVPPPPGMGPPRLWPPHGMIN RPPMNPLVAQDIMNRIGINKPFAMMAGSPPTNMSPIGSPRFVQAPHLIPQPNIGFGQQHI IRPGQGPTRFQGPMQQMRQFPNQRYAGPQQRPMYLGPGHLHPEHSRFVRMRRQQSNRNRP YNGNHQHHGNHHDRRSHGRDSSSRDPYAYLMTSREKEWVIKIQMMALQSDRPEIDDYYYQ RYIDKRLQEGKLSLDDDNPEQKRLITPTKANPEGKKYIPVQFDNSLGKLTVSSVYNPRQI IDVIHAEKEEENQTETFDVKMSMNKRLEIYKIIEKAYSSVMELEELNFNPEDLDDTENNE DAEKADNRSAKVYKSLEELLFSNESSSKEEKVVTLDIISQCLRIRKGKRLACRVLPLLTQ VYAVKITQTIIKQLPVLIKRDQKEDILQEFYHPICHVLQSMDSDELLNTCSILTSICNVI CRDKFGISIVCKILVIGDKIDELKDELQSKKIWNDFISSCFKAFFLLCDKKKSQIPNILE DELAIEAIAVLENHSQLINEGEKKRNKSIADLKEMLSFQIEGTAL NT seq 2658 nt NT seq  +upstreamnt  +downstreamnt atgagcgacccctttttctttgcttcaaaatctcagtttcgtaaggatgattcgagaaga aatattgaccttctgaatgatgaaacatttggatctggagctgttgatgataactgggaa gatgaacataatcaatttgttgaacaaaattcacggggtagtagtcttagtgcagttggg cgaatggaagattatcttgatgaagatgaattggaattatcaaatcaacaactcgcagct gcagtagaagaactggtcttgaacagcgaccaggatcaagatgcaattgatcctgccatt gtcagcttgcgtaaagaatctcgaatgggttcatatgatccaagactaacagaagatctc atatcaccatatatgggtgaaaggaataattttggtagaataactccgacatattcttca caaaattcttcatcttcatcagcttcactctttcaaactgatggattgcgtaatatctgg agtaatactgacctggaggttcaagactcgttaacaaaatcaccatctatgatattggaa cgtcaaatgttgaatgaaaagttgaagaaaatgatgactaaaactacgtcacccgaattt gaggatgaggcaattctgtcagctgtaaaagcaaatcccatgccacaaagttggccgata acctcccaatctgaagatttacttcgtcacatgtttgctcaaaaacaaccaatgttaaga gccgaagacttggaaagggaattctcaggtagtcaactgaggggaccatctccaacattt ggtatcagcattcctaaagacaatgacctgaatcataatggaatggatagatcactgcct gcaagatcagtatctccgatcattggtagcccaacatcacacgctttgcctattggaaca ccacctaaacatatagctgatatgatgcatcaagcacacaaacaggggctcggaggacca catcctggcttccctcttcttcaaagacctcaaggttttatggttcctccaggaagagca gtacctccaccaccaggcatgggaccacctcggttgtggcctcctcatggaatgattaac agaccaccaatgaatcctctagttgctcaggatatcatgaatcggattggtataaacaaa ccatttgcaatgatggcaggatcaccaccaacaaatatgagtccgataggatcacctaga tttgtgcaagcccctcatttgattccacaaccaaacattgggtttggtcagcaacacatt atcagacctggacaaggtccaacaagatttcaaggacctatgcaacaaatgagacaattc cctaatcaaagatatgcaggtccacaacaacgtcccatgtatctaggtcctggtcattta catcccgagcatagtcgatttgttcgcatgcgacgacaacaatcaaaccgtaacagacca tataacggtaatcatcaacatcacggaaatcatcacgacagacgatctcatggtcgagat tcttcatcacgtgacccatacgcctacttgatgacaagtcgagaaaaagaatgggttatc aaaattcaaatgatggcgctacagagcgacagaccagaaattgatgactattattatcag agatacattgataaacggctacaagaaggaaaattatcccttgatgatgataatccagag caaaaaagattgattactccaactaaagcaaacccagaaggcaaaaaatatattccagtt caatttgacaactcactgggcaaacttacagtatcaagtgtctataatcctcgacaaatc attgatgtcattcatgctgaaaaggaagaagaaaaccagacagaaacttttgatgttaaa atgagcatgaacaaacggcttgaaatatacaagatcattgaaaaggcctattcttctgtt atggaactggaagagttgaatttcaatccagaagatttggatgacacagaaaataatgag gatgcagagaaagcagacaacagatctgcgaaagtttataaatctttggaagaattattg ttttccaatgaatcaagttccaaggaagaaaaagtagtcactcttgacatcatctcacaa tgtttacgaattcgaaaaggaaagagacttgcttgcagagtcttgccattactaacgcag gtctatgcagtcaaaattacacaaacaataataaagcagttgccagttttaataaagagg gaccaaaaggaagatatacttcaagagttttatcatcctatttgtcatgtgttacagtct atggattcagatgaattattgaatacttgttccatacttacttcaatatgtaatgttata tgcagagataaatttggaatttcaattgtttgcaagatattagttataggagataaaatt gatgaactaaaagatgaacttcaatctaaaaagatttggaatgatttcatttccagttgc ttcaaagcttttttcttgctgtgtgataaaaagaagagtcaaattcctaatatattagaa gatgaactcgccattgaggcaatagctgttttagaaaaccatagccaacttatcaatgaa ggtgaaaagaaaagaaataagagcattgcagacttgaaagaaatgttatcttttcaaatt gagggaacagctttatag

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