Styela clava (leathery sea squirt): 120340531
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Entry
120340531 CDS
T07291
Name
(RefSeq) glycine receptor subunit alpha-2-like isoform X1
KO
K05194
glycine receptor alpha-2
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120340531
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sclv04040
]
120340531
Ion channels [BR:
sclv04040
]
Ligand-gated channels
Glycine
120340531
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DNA_pol3_tau_4
Motif
Other DBs
NCBI-GeneID:
120340531
NCBI-ProteinID:
XP_039264741
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MVFVYYILVAFQLFVFVSIEGFPTGNDESTPAGNSGYEYEYNYFYTPPDNKGVEGQNTGS
SMNGETLMAAEHKARDTNEIEFLEGLLINYDQRIRPNNNGVPVRANVSIFVNSFYSVNEQ
TMDYKLNIFLRLRWNDPRLAHNFNDKAVALHPSMLGKIWKPDVFFSNEKHAAFHSVTTEN
KLLRVYTNGDVYSSVRLTLTLSCAMHLRNFPMDVQICNMEMESFGYDMKDLIFDWDGPHA
VQLPKTLALPQFRIRGYRLNTCTKVYSTGSFTCLGADFILQRQMGYYIIQMYAPSLMIVI
LSWVAFWINMDAAPARTALGITTVLTMTTQSSGARASLPKVSYVKAIDVWFAVCLIFVFA
ALIEFAVVNFLSRQEKSFFKLGLQLANIKKEEELDEQGTLKPKKRRRDVHSDTTGDGIST
EMKAMSTTSPTPTSASRYSMIGQIPDEEKSKKERYRWKAKRIDRISRVCFPLSFIVFNLF
YWIVYQVARDDLRNVLDGAIPYDT
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggtttttgtatattatattttagtggcgtttcaactttttgtattcgtaagcatcgaa
ggttttccaacgggtaatgacgagtcaacaccagcgggtaacagtggatatgaatacgag
tataattatttttatacaccgccagataataaaggggtggaaggccaaaacaccggatcg
agcatgaacggtgaaactctcatggctgccgaacacaaagcaagagatacgaatgaaatc
gagtttcttgaaggattattgattaattatgaccaacggataaggccaaataataatggt
gttcctgtgagggctaatgtgtcgattttcgttaattctttctattcggtcaacgaacag
acaatggattacaaattgaatatatttttgcgtcttcggtggaatgacccacggttggct
cacaacttcaatgacaaagcagttgctctccacccatcaatgttaggaaaaatatggaag
ccggatgttttcttttctaatgaaaagcatgctgcattccactcagtcacaacagagaac
aaattactgagggtttatactaatggcgatgtttattccagcgttcgcttgactcttacg
ttatcttgtgctatgcacttgaggaattttccaatggatgtacagatttgtaacatggaa
atggagagttttggttatgacatgaaggatttaatattcgattgggacggaccacatgcc
gtgcaacttcctaaaacacttgcactacctcagtttcgaatccgtggatacaggttgaat
acctgcacaaaagtatacagcacaggttcgttcacttgtcttggagctgactttattctt
cagcgtcaaatgggttattacataattcaaatgtacgccccatctctcatgattgtcatt
ttatcgtgggttgcattttggatcaatatggatgctgcacctgcgagaacagctttggga
ataactactgtacttactatgacaactcaaagttccggagctcgagcttcgttaccgaag
gtatcttatgtcaaagctatcgacgtatggtttgccgtttgcctcatatttgtattcgca
gctctcattgaatttgctgttgtcaactttttatctcgacaggaaaaatcgtttttcaaa
ttgggattgcagcttgcaaatattaagaaagaggaagaactcgatgaacagggtacgttg
aagccaaaaaagaggcggagagacgtacattccgacacaactggagacggaatatcgaca
gaaatgaaggcgatgagtacaacgtcacctacaccaaccagtgcgtcacgatactccatg
attggacaaattcccgatgaggaaaaatctaagaaggagaggtacaggtggaaagcaaaa
agaattgaccgtatttcacgagtttgctttcctctttcgtttattgtcttcaatttattt
tactggattgtttatcaggttgctcgtgacgacctacgcaatgtgttagatggagcgata
ccttatgatacctaa
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