Styela clava (leathery sea squirt): 120340569
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Entry
120340569 CDS
T07291
Name
(RefSeq) CCR4-NOT transcription complex subunit 7-like
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120340569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120340569
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120340569
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120340569
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
120340569
NCBI-ProteinID:
XP_039264794
LinkDB
All DBs
Position
Unknown
AA seq
281 aa
AA seq
DB search
MKMPGQNADDPILEVWASNVDEEFKKIRKLIHHYPYVSMDTEFPGVVARPIGEFRSNSDY
QYQLLKCNVDLLKIIQLGLTFMNDKGETPPGISTWQFNFAFSLNEDMYAQESIDLLHESG
IQFKQHEDEGVEPLYFAELLMTSGIVLMDNVKWVTFHSGYDFGYLLKILTNNNLPSEESE
FFELIKIFFPNIYDVKYLMKSCKNLKGGLQEVAQQLEIERTGPQHQAGSDSLLTGQTFFK
MREMFFEDHIDETKYCGHLYGLGSSYVQNGNPYSAEEFNKS
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcctggtcagaatgcagatgatccaatcctcgaagtttgggcatcaaatgtt
gacgaagaattcaaaaaaattaggaagttgattcatcattatccttatgtttctatggac
acagaatttcctggtgttgttgcaaggccaattggagagtttcgtagcaattcagactat
caatatcaacttttaaaatgtaatgtcgatcttttgaaaataattcaactaggattgact
tttatgaatgacaagggtgaaactccacctggaatatcaacatggcagttcaactttgct
ttcagtttgaacgaggatatgtacgcccaagaatcaattgatctactgcatgaaagcgga
attcaatttaaacaacacgaagacgagggagtagaacctttatatttcgcagaactgtta
atgacatcaggcattgtcctcatggataatgttaaatgggtgacattccacagtggatat
gactttggatatttattgaagatattgactaataacaacttgccatctgaagaaagcgaa
ttttttgaattgattaaaatatttttcccaaatatttatgatgtaaaatatttaatgaaa
agctgcaaaaatttgaagggtggtcttcaagaagttgctcaacagttagaaattgaaaga
acaggaccacagcatcaagctgggagtgatagtctacttacaggacaaacatttttcaag
atgagggagatgttttttgaagaccatattgatgagaccaagtactgtggccatttatat
ggcttgggcagtagttatgtacagaacggtaatccttatagtgcagaagaatttaacaaa
agttga
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