KEGG   Styela clava (leathery sea squirt): 120340570
Entry
120340570         CDS       T07291                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
sclv  Styela clava (leathery sea squirt)
Pathway
sclv03020  RNA polymerase
sclv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sclv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120340570
  09124 Replication and repair
   03420 Nucleotide excision repair
    120340570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sclv03021]
    120340570
   03400 DNA repair and recombination proteins [BR:sclv03400]
    120340570
Transcription machinery [BR:sclv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     120340570
DNA repair and recombination proteins [BR:sclv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      120340570
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4 GSCFA DUF1247
Other DBs
NCBI-GeneID: 120340570
NCBI-ProteinID: XP_039264795
LinkDB
Position
Unknown
AA seq 145 aa
MTSSSTKALSSVLEDKEEDASQLQFPPEFENAETLLNSEVHMLLEHRKQQNENVEEEQEL
SEVFMKTLNYTQRFSRFKNRETIASVRSLLLQKKLHKFELASLANLCPETAEEAKALIPS
LEGRFEDEELLQVLNDIQLKRSFQA
NT seq 438 nt   +upstreamnt  +downstreamnt
atgacgtcctcctccacaaaagctcttagttctgtgttagaagacaaagaagaagatgca
tcgcagctacaatttcctcctgaatttgaaaatgcagaaactttgctcaactcggaagtt
catatgttacttgaacatcggaaacaacaaaatgaaaatgttgaagaagaacaagaatta
tctgaggtatttatgaaaacactgaactacacacagcgtttcagtcgatttaaaaatcgt
gaaacaatagcaagtgttcgcagcctgttacttcaaaagaaactccataaatttgagctt
gcatctctcgcgaacttgtgtcctgaaactgccgaagaagctaaagcacttatccccagt
ctagaaggccgatttgaagatgaggaactactacaagttctcaatgatattcaattaaaa
agaagtttccaggcttga

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