Styela clava (leathery sea squirt): 120340716
Help
Entry
120340716 CDS
T07291
Name
(RefSeq) transcriptional regulator ATRX homolog
KO
K10779
transcriptional regulator ATRX
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120340716
03036 Chromosome and associated proteins [BR:
sclv03036
]
120340716
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
120340716
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120340716
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
BRICHOS
Motif
Other DBs
NCBI-GeneID:
120340716
NCBI-ProteinID:
XP_039264997
LinkDB
All DBs
Position
Unknown
AA seq
1274 aa
AA seq
DB search
MSDYEYRSSRAASKNRKGGRINYAEPESDVESEDDSSFFTDSNEPDVLTPIKGDTPKNRS
PLSSLKKTQRRKREIFKNNVKPEMNITNPNIISSSSGSESDIDEESDSKLDSKDDKKTHN
GSRKRSASSISKKSKKIKDDLIETDSNTDDTNSDEEPVVEAKVRKCRDKKKKTKKERNLG
RRKIKKILLDKDLQKQTRNAAKEERERLKRLEELEKAESEEEPDEIEQTPEKKILTSTVM
LQKHPHVAVSEYIAQHLRPHQVEGVKFIWNNLVESTERVKNGSGSGCILAHCMGLGKTLQ
TISVIHTLLKTKYVPFECAMVVAPLNTVRNWIAEFVQWCEDGDELNLFNFAEPKTNKERV
SMLRLWRKNGGVLILGYDMYRIMTTKIRYSGWKKTVHECLVDPGPDVVVCDEGHMLKNAT
SHISKQISKMRTKRRLVLTGTPLQNNLIEYHCMVDFVKPDLLGSLKEFRNRFVNPIINGQ
HIDSTDRDVKIMKKRSHVLHQMLQGFVQRKDYSCLKPYLSSKFEYVLKVRLTPLQIKLYQ
HYLDTMTNRGSNTTIVNSYGKGASLFADYQNLMRVWTHPKSLLLHTVQRDKMLARQAEWD
FIAEELEASETDDWSNSSEEDDKNANENNENDSINKTVKSEKNIDSDTKKDKFNNVINLN
DVDKDNSGDSSGSEEVISTRRTRSKRRKAVIKDNDEWDSDEASTEKDEDAESGNSSDDEE
SESDSESDAEKIPDRRTRSTTSRKQRYRLRCVESDAEIEFLELESTSEKKEPEWYAKILP
EDQNTLENYQNSSKIAILFEILRLSEERKEKVLIFSQSLISLDLIEEMLKATVSSDDSEN
EMSDAAAENTLNSEEIPKANLIGTESEEEPDIGNLNKLPKRTWFKNLDYFRMDGATQSHH
RQKWINAFNNESDTRARLFLISTRAGSLGVNLVGANRVIIFDASWNPSHDTQSMFRVYRF
GQTRKCYIYRLIAEGTMEEKIYQRQVNKQSLAFRVVDEQQINRHFTANSLAEMYTFNPTT
PDIGKDEPTPIVPKDEVLADILSDPRTKYMVASYHEHDSLLDHQVDEELTEEERKAAWEE
YEMIKKGHAPTISLQDWRQQSNLSNTQRPSSFSLKPMDSESSVVLLSRLSKMVANAFYQY
QVCEVKSVPSIMKHLKETPLYSNSNEETIKAIAVEVNYRLELQRNEKFSTFQNLQRQFKQ
LQMQYFKQIGSGMLTERPAGQSSAVRIPTKDALLQHMASTSRTSSPTPLNGHQTSTTITA
IEIIDDENETKDSK
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactacgaatatcgtagttctcgtgctgcttcaaaaaatagaaaaggtggacga
ataaattatgctgaaccagagagtgatgttgaatcagaagatgattcatcttttttcaca
gatagcaacgagccagatgtactaactccaatcaaaggagatacgcccaagaatcgtagt
ccactgtcttctctgaaaaaaacacaaagaagaaaaagggaaattttcaaaaataatgtg
aaacccgaaatgaacataacaaatcctaatattatttctagtagtagtgggagtgaatct
gacatagatgaggaatccgactcaaaacttgattcaaaagatgacaagaaaacacacaat
ggtagtcgtaagcgtagtgcttcgtccatttcaaaaaagagtaagaaaatcaaagatgat
ttgatagaaactgactccaatacagatgatacaaactcagatgaagaaccggttgtggaa
gcaaaagtaagaaaatgtcgtgacaaaaagaagaaaaccaaaaaagagagaaatttagga
agaaggaaaatcaaaaaaattttgttggataaagatcttcagaaacaaacaaggaacgct
gcaaaagaggaacgtgaaagattaaaaagactcgaagaacttgaaaaggctgaaagtgaa
gaggaaccagatgaaattgaacaaacgcctgagaaaaagatacttacttctacagtaatg
ttgcaaaaacatccacatgttgcagttagtgagtatattgcccaacatttacgcccacat
caagtagaaggcgtaaagtttatatggaacaatcttgttgaaagcacggaaagagtgaaa
aatggctctggtagtgggtgcattcttgcccattgcatggggcttggaaaaacactgcaa
actatctcagtaatacatacacttttaaaaactaagtatgttccattcgagtgtgctatg
gtagtcgctcctctcaacactgtgcggaattggattgcagaatttgtgcaatggtgtgaa
gatggtgatgaattaaatctttttaattttgctgaaccaaagacaaataaagaaagagtt
tctatgttacggttatggcgaaaaaacggtggtgttttgattttaggttacgacatgtat
cgaattatgactacaaaaatcaggtattcagggtggaaaaagactgtgcatgagtgcttg
gtcgatcctggtcctgatgttgtagtttgtgatgagggtcacatgctcaaaaatgcaacc
tcacatatctcaaagcaaataagtaaaatgagaacgaaaagaaggctggtccttactggt
actccattgcaaaacaatcttatagaatatcattgcatggttgattttgttaaacccgat
cttctcggttccctgaaagaatttaggaatcgtttcgtcaacccaattataaatggtcag
catattgattcaactgatcgtgatgttaaaattatgaaaaagcgatcgcatgtcttacac
caaatgctccaaggttttgttcaacgcaaagactattcatgtctgaagccatatttgtct
tctaaattcgaatacgtacttaaagttcgcctcacgcctttacagataaaactctatcaa
cattatttagacacaatgactaatagaggatcaaacacaacaatagttaattcttatggt
aaaggagcctcactgtttgctgattatcaaaatttaatgcgagtatggacacatccaaaa
tctttgttattacacacagttcagagagacaagatgttggcccgccaagctgaatgggat
tttattgcagaagaactggaagcaagcgaaacagatgattggtcgaattcatctgaagaa
gatgacaaaaatgccaatgaaaataatgaaaacgattcaatcaacaaaactgtaaaaagc
gaaaaaaatattgacagtgacacaaaaaaagataaattcaacaatgttattaatttaaat
gacgttgataaagataattcaggtgatagttctggttcagaagaggtcatatcaacgaga
agaacacggtcaaaaagaagaaaggcagttataaaagataatgatgaatgggacagcgat
gaagcttctacagaaaaagatgaagacgcagaatctggcaacagttctgatgatgaagaa
agtgaaagcgacagtgagagtgacgcagaaaaaattcctgatagacgtacaagatctacc
acaagtagaaaacaacgataccgtttgcgttgtgttgaaagtgatgctgaaattgagttt
ctcgaattggagtcaacgtctgaaaagaaggagcctgaatggtatgctaagattctccct
gaggatcaaaataccttggaaaattatcaaaacagttcgaaaattgcaattctgtttgaa
atattaagactatcagaggaacgtaaagaaaaggttcttattttcagtcaaagtttgata
tctcttgatttgattgaagaaatgttgaaagcaactgtgtcttctgatgattctgaaaat
gagatgtcagatgcagctgctgaaaatacattgaattctgaggaaatccctaaggcaaac
ctgattggaacagaatcagaggaagaaccagatatcggaaatttgaacaaactaccaaaa
agaacatggtttaaaaatcttgattactttcgtatggatggcgcaacacaaagccaccat
cgtcaaaagtggataaatgcattcaataatgaaagtgacacacgggctagattatttttg
atttccacacgtgcaggtagtcttggagtgaaccttgttggtgcaaacagggttatcata
tttgatgcctcatggaatccttctcatgatactcaatccatgttcagagtttataggttt
ggacagacaaggaaatgctatatctatagacttatcgctgaaggcacaatggaagaaaaa
atctaccaaagacaggtgaacaagcaatctcttgcttttcgagttgttgatgagcagcag
attaacagacattttactgctaattctcttgccgaaatgtatacttttaatcccacaact
cctgatattgggaaagatgaaccgacaccaattgttccgaaagatgaagtactcgctgat
atactctctgatccacgaacaaaatacatggtcgcgtcttatcatgaacacgactccctc
cttgatcatcaagtggatgaggagttgacagaagaggaaagaaaagctgcatgggaagag
tatgagatgataaagaaaggccacgctcctactatctcacttcaagattggaggcagcaa
agtaatttatccaatactcaaaggccatcttctttttcactaaaaccaatggacagtgaa
tcatctgtcgttttattatctaggttgagtaaaatggttgccaatgctttttaccaatac
caagtatgtgaagttaagtctgtcccaagcataatgaaacatcttaaagagactcccctt
tatagtaattctaatgaagagactattaaagcaattgcagttgaagttaactatcgttta
gagcttcaacgtaatgaaaaattttctacttttcaaaatttacaaagacaattcaaacaa
cttcaaatgcagtattttaaacaaataggcagtggcatgctaaccgaacgtccagcaggg
caaagttccgctgtacgtattccaacaaaagatgcattgttacaacatatggcatcaaca
agccgaacttcgtcaccaactcccttgaatggtcatcaaacctccacaactatcacagct
attgaaatcatagatgatgagaatgaaacaaaagatagcaaatga
DBGET
integrated database retrieval system
