Styela clava (leathery sea squirt): 120340737
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Entry
120340737 CDS
T07291
Name
(RefSeq) protein Smaug homolog 2-like
KO
K27396
protein Smaug
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120340737
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
120340737
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
120340737
NCBI-ProteinID:
XP_039265023
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MLFSDQVSILSTWFKNWNECEQTVALFSLLKRVQKRQAKFLARCLEHGLKDCLELIPVEK
EANDAGFIGRLINEPQQEKVIKILLSHLPLLRPGNNDAKTRYLDLLPRVLAFAVESSKYL
QESRQLLSYSLIHPAFDNDERSSLTSWMEHLDDRIPNVVPENNYPPNAQLEDSQNANDVN
HNRLWKDDPALLGPSDTTPAPLLTSPTSWQASDNNGFKSETNQTNSLSPGHRRTEDIETH
QHTDTNKSTSEDTNAAEYDFISWLKSLRLHKYNDLFASMKYDEMMQLNEHTLSKKNVTKG
ARDKILLNVKRLHERFEKLQGLEKEIPRGGSLRSALNELKSMIYTPIIRFESPPTEDPTP
AQAQNLPTPSPGQSEILPGDIPGQFTKVLGKACTQLLISKPDKDNITLYLQLLEKCMHHT
AFTSQQKKRLQSWKWQINKIYRSLPRNQQMSSQRSAVGANYPNKRVSGRSLPSFGAGVIS
PAASPAMRSSNQLSMFPAQVLKPTWYGYGSNTHPTPHTVQPPIEAARKTASLDPSLVQRP
AAYPVSHSSDIGNLQGLTGGPGDTDISKRLDSLSLSVAEHALSDADRISTL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcagcgaccaggtgagcattctttcaacctggttcaaaaattggaatgaatgc
gagcagactgttgctctgttttcattattgaaacgagtacagaagagacaagctaaattt
cttgcgagatgtcttgaacatggactaaaagattgtttggaactgattcctgtggaaaaa
gaggcaaatgatgctggtttcatcggacgtcttattaatgaaccacagcaagaaaaagtt
attaaaatattactgagtcatttaccactattacgaccaggaaacaatgatgctaaaacc
agataccttgatttattacccagagttcttgcatttgccgttgaaagttcaaaatatctt
caagagtcacgacaacttctatcatattcactgattcatcctgcatttgataatgatgag
agatcgtcgttaacgtcatggatggaacatttagacgacagaataccaaacgttgtaccg
gaaaacaattatcctcctaatgcccaacttgaagattctcagaatgcaaatgacgtcaat
cacaaccgattatggaaagatgatcctgctttgttgggaccttcagataccacgcccgct
cctttattaaccagtcctacatcatggcaagcttcagacaacaatggttttaagtctgaa
acaaaccagacaaattcattgtcacctggacacagacgaactgaagacattgagacacac
caacacacagacacaaacaaatcaacttcggaagacacaaatgctgctgaatatgacttc
atatcatggctaaaatcacttcgacttcacaaatataacgacctatttgccagcatgaaa
tacgacgaaatgatgcaattgaatgaacatactctttctaaaaagaatgtaacaaaaggt
gcgcgggataaaattctattgaatgtcaaaagacttcatgagagatttgaaaaattacaa
ggactggaaaaagagattccgagaggtggttcattgcgaagtgcattaaacgaactcaaa
tcaatgatctacactccaattattcgctttgaatctccgcccactgaagaccctactcct
gctcaagcacaaaacttaccgacgccatcgcctggacaatctgaaatattgcctggcgat
attcccggacaatttacaaaagttcttggaaaagcctgcacccaacttctgatctcaaaa
cctgacaaggacaatataaccctttacctacaactgctagagaaatgtatgcatcacacg
gctttcacatcgcaacagaaaaagagactacagagttggaaatggcaaatcaataaaatt
tatcgttcgttacctagaaatcaacagatgtcctcacaaagaagtgctgttggtgcaaac
tatcccaacaagagagtgagtgggcggagtctgccgtcatttggagctggagtgataagt
ccagctgcatcaccagcaatgcgatcttcaaatcaactttctatgtttcctgctcaagta
ttaaagcctacatggtacggttatggatcaaacactcaccccacccctcacaccgtccaa
cctccaatcgaagctgctagaaaaactgcatctctggacccaagtcttgttcagcgacct
gcagcgtacccagtttctcattcatcagatattggaaatctgcaaggtcttacggggggc
ccaggtgacacagacatcagcaaaagacttgattcgttaagccttagtgtggcggaacat
gcattgtcagatgctgatcgtatatcaaccctatga
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