Styela clava (leathery sea squirt): 120340866
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Entry
120340866 CDS
T07291
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup85-like
KO
K14304
nuclear pore complex protein Nup85
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120340866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120340866
03036 Chromosome and associated proteins [BR:
sclv03036
]
120340866
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120340866
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120340866
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
TPR_19
Motif
Other DBs
NCBI-GeneID:
120340866
NCBI-ProteinID:
XP_039265186
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MADNEEFVNEMNINDKLFDPCGILSSWGVGNQMMVAAGGDVGSERPNQLAHLPILIHEVR
WSNEMHLDITRKLLNESHRIFIEVQEARNDFQKSSQDQQLLVKFSRKYRSVLRACVLEIK
SKIEESIMEDVQLVMQLELLSMMEIIWNLCEILFIENSPAGVVLSRLAEWCKFHFTQADD
FMEECIQTEQPYNHELYWSTIKCLVLQGRTDDAQNMLKLHPECQSQKDNAFLSMEELLRK
MPHFTYYRGQSVVEFEMKWNHWQEECRRRFDEGEFNVNKELQEIAMILCGDDAVFENPDY
GGWHQMLISRLLFTQPTVSVMELQHHSKISVESCGGRERLGAFDHILLAAFELDPYSVIK
ECSQQLSNWWLAAHLSDIFYHLGILXAKKLEFGVDFHELLILEYATSLMSHESLWRVTID
YLSACSENENNYLSLFVRKIPITSEKKASKLLRICQNRGLLAEAQSICRQMSVSALQRNR
LGTALSWCLKCNDSALTMRIAEKMLSEYARTGEFTHIDLLDYLGPSILLSDRLTFLGKYR
DFHKLYAEGMHKESGNLLLNLLISNIAPVEFWPSLLIDCLPLLECEEIVFNASDSAKLLA
KLNTLDQINLDSELSDSEKETRQKRLELLKLNMSRNLARAIVNAG
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaatgaggaatttgtcaatgagatgaacataaacgacaaactttttgatccg
tgtgggattttaagtagctggggggtcggaaatcaaatgatggtcgcagctgggggtgac
gtggggtcagaacgacccaatcaacttgctcatttgccaatccttatacacgaggtacgc
tggagtaatgaaatgcatttagacattactcggaagcttttgaacgaatcacatcgaatt
tttatcgaagtgcaagaagcgagaaatgactttcaaaaaagtagtcaagatcaacagtta
cttgtgaaattcagtcggaaatatcgttctgttttgcgagcttgcgttctcgaaataaaa
tctaaaattgaggaaagtataatggaggacgttcaattggtcatgcaattagaactgctg
agtatgatggaaataatttggaatttatgcgaaatacttttcatcgaaaattccccggcg
ggagttgtattgtctcgtcttgcggaatggtgcaagtttcatttcacccaagcggatgat
tttatggaagaatgcattcaaacggaacaaccatataatcatgaattgtactggagcacc
atcaagtgtctcgtccttcaaggtcgaacggacgacgcccaaaacatgttgaaacttcac
ccagagtgccagagtcaaaaagataacgcatttttaagtatggaagagttgctgcgaaaa
atgccacattttacgtactatcgcgggcaatcagtcgtcgaattcgagatgaaatggaac
cactggcaagaggagtgtcgtcgtaggtttgacgaaggagagtttaatgttaacaaggaa
ttacaagaaattgcgatgattttatgcggagacgacgctgtttttgagaatcccgattat
ggcggatggcatcaaatgttgatatcgagactacttttcacacaaccgaccgtcagtgtc
atggagttacagcaccatagtaaaatatctgttgaatcatgcggagggcgagaacgcctc
ggagcttttgatcatattttactcgcggccttcgaactcgatccgtattctgttattaaa
gaatgcagtcagcagttgagtaactggtggttggctgctcatttatccgacattttttac
catcttgggattctgntcgcaaaaaaattagaatttggggttgattttcatgaacttttg
attctggagtacgcaacgagtctcatgtcacatgaaagtctatggagagttacgattgat
tatttgtcagcatgctcggagaacgagaataactatctctctctatttgtgcgaaaaatt
ccaattacaagcgagaaaaaagcttcaaaattgttacgtatttgccaaaatcgaggattg
cttgcagaagcacaaagtatctgtcgacaaatgagtgtatcagcgctacagcgaaatcgt
ttgggcactgctttatcgtggtgtttaaaatgcaacgattcagccttaacgatgcgaatt
gcagaaaaaatgttgtcggaatacgctcgaactggtgaattcactcatatcgatttgctg
gattatttaggaccttcaattctgttatcagatcgactgacgtttttaggaaaatatcgt
gattttcacaaactttacgccgaaggcatgcacaaggaatctgggaatctacttctcaac
ctactcatctcaaatatagcgcctgttgagttttggccgtcgctactcattgactgtctc
cctcttcttgagtgtgaggagatcgtgttcaacgcttcagactcggccaagttactcgct
aaattaaacactctcgaccaaatcaatttagactcagaattatcggactctgagaaagaa
actcgacaaaaacgactggaattacttaaactaaatatgtcgaggaatttagccagagct
attgtcaatgcggggtaa
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