Styela clava (leathery sea squirt): 120340966
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Entry
120340966 CDS
T07291
Name
(RefSeq) histidine--tRNA ligase-like isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120340966
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sclv01007
]
120340966
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sclv03016
]
120340966
Enzymes [BR:
sclv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
120340966
Amino acid related enzymes [BR:
sclv01007
]
Aminoacyl-tRNA synthetase
Class II (A)
120340966
Transfer RNA biogenesis [BR:
sclv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120340966
Prokaryotic type
120340966
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
tRNA-synt_2d
WHEP-TRS
tRNA-synt_2
Motif
Other DBs
NCBI-GeneID:
120340966
NCBI-ProteinID:
XP_039265302
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MNVNWTKLLRISTSITKSLKLRSTYAFCHHATTVDEIDEEVSKLLELKAKLGDGDTKTKY
VLKAPKGTRDFTPKQMVIREKVFDTIIGCFKRHGAETIDTPVFELKETLTNKYGEDSKLI
YDLKDQGGEMLALRYDLTVPFARYLAMNKIQSIKRYHIAKVYRRDQPAMTKGRYREFYQC
DFDIAGPHDSMIPDAECLRIVYEILSDLMLGEFKIKVNDRRILDGVFEACGCPPDKFRPA
CSAVDKLDKLPWEDVRKEMLEKGLAEEIADHIGHYVRMSGSHELVNQLLNDSFLIKSKSA
VAGLNDLKLLLEYLELYNIMDKTSFDLSLARGLDYYTGVIYEAVLTDSSVNEDPDRKKGE
TVGVGSVAGGGRYDGLVGSFDPKGKSTPCVGVSIGIERVFAILEARSENSNSRTTETEVY
VASPQKNMLKERMKIIAELWQAGIKAEMSNKKNPKLLNQLQHCEENGIPVAIMIGSGELE
EGNIKIRDIKTREESLVPRSAMIEQLKDILHQVRNGES
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgaattggacaaaacttcttagaatttcgacttccattaccaagtcgttgaag
cttcgctcgacatatgctttctgtcatcatgccactacagtagatgagattgatgaagaa
gtttcaaaactactggaattgaaagcaaaactgggggatggagatacgaaaacaaagtac
gttctcaaagctccaaagggaactagagacttcacgccaaagcaaatggtgattcgtgaa
aaggtttttgacaccatcatcggttgctttaaaagacatggagcggaaacaattgatact
cctgtatttgaattaaaggaaactctgacaaataaatatggagaggacagcaaactaata
tacgatcttaaagatcaaggaggtgaaatgctggctttgagatatgatcttacagtacct
tttgcaagatatttggcaatgaacaagatacagagtataaagcgatatcatattgcaaaa
gtgtacaggagagaccagcctgccatgacgaaaggacgatatagagaattttaccagtgt
gattttgacatcgctggccctcatgattcaatgattcctgatgcggagtgtctacgtatt
gtttatgaaattctttctgatctcatgttgggggaatttaaaataaaggttaatgatcga
cgtatacttgatggtgtgtttgaagcttgtgggtgtcctccagataaattcagaccagca
tgttctgcagttgataagttagacaagttaccgtgggaagatgttcgaaaggaaatgttg
gaaaaaggattggcagaagaaatagctgatcatattggccactatgtccgaatgtcaggt
tctcatgaattagtaaatcaattgctcaatgattcctttcttattaaaagcaaatctgct
gtagccggattgaatgatttaaaattattgttggagtatttggaattgtataacataatg
gataaaacttcatttgatctcagtctcgctcgaggtcttgattactacacaggagttatt
tatgaagcagttctgactgatagttctgtgaatgaagatccagatcgtaaaaaaggagaa
accgttggagttggatctgtagcaggaggaggtagatatgatggtcttgtgggaagtttt
gatccaaaaggaaaatctacaccatgtgttggcgtcagtattggaattgaaagagtattt
gcgatattggaggccagatcagaaaattcaaattccagaacaacggaaactgaagtatat
gttgcatctcctcaaaaaaatatgttgaaagaacgaatgaaaattatagcagaattgtgg
caagcaggaataaaggctgaaatgtcgaataaaaagaatccaaaacttttgaatcaactt
cagcattgcgaagagaatgggatccccgtcgctattatgatcggtagtggagaattagaa
gaaggaaatatcaaaattagagatataaaaaccagagaagagtctttagtgccacgatca
gcgatgatagagcaactgaaagatatattacatcaagtgcgaaatggagaaagttga
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