Styela clava (leathery sea squirt): 120341166
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Entry
120341166 CDS
T07291
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120341166
04121 Ubiquitin system [BR:
sclv04121
]
120341166
Enzymes [BR:
sclv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120341166
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120341166
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120341166
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF5128
DUF4934
Filamin
zf-B_box
SGL
ANCHR-like_BBOX
zf-B_box_Trim66
Beta-prop_IFT122_1st
Big_8
AAA_RNF213_5
Motif
Other DBs
NCBI-GeneID:
120341166
NCBI-ProteinID:
XP_039265562
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MAGAFNLGHNRRTLSSDSGIQFFSDSSLSVISGATSPTTNLSSFSPTPQLIGPVKHNGQL
QIPDPKSSATLLEGILQNLSIPEDSSRPSEIVNRHSCHCDDGVTATSYCSYCNDYLCAKC
VSAHNRVKLTRDHPIESIKNPDIDTSSDFSNYLAFNTRSSQQTCNEHNGGILQLYCELCA
TAICNKCAILNHSGHNIQYLQQVMEGSKTALLSLISQSRAKTDLYEKLSKDVLATIKNLE
MQTGAICVDIKTVFHNLMSLLGQREQELINNVHKVQQVKFHALNRQYEEINERSTKLVKL
TDEIKNNFEFSNDIDILKAKNTLMRELVVTEQQLSKITSPYEDESVAFLPPDPNIKTTLG
KLGKISCEASATFSAISKSSFKGAVCNQMAYLTVAINNHLREPCNSTNLLHFNVTDPNGN
SVHHEVIENNNGTCSLKFCPAQEGIHKISCSIRGKDILESPLNIPVQTARPHISSGSSPR
FSFGGTGEKDGQLCRPWGIACDPAGNFIVADRSNNRIQIFSSKGEYIRKFGASGSYPGQF
NRPAGLSVDVHNRIVIADKDNHRIQLFTLEGEFLFSFGERGSKSGQFYYPWDIATNSNGV
IAVTDTRNHRIQIFNPYGKFIGKYGFEGVLWKHFDSPRGIAFTNGDASLIVTDFNNHRLV
IVQSDLQSARFLGSEGSQPSQFLRPQGVAIDDRGNYVVADSRNNRLQIFSPTGTIIAILG
GVLGSGSEEMDRPSGIAVAPDGGIAVVDFGNNRILVY
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgctttcaatttgggccataacaggagaacattatcaagtgactccggaata
cagttcttctctgatagctccctatctgtcatttctggtgcaaccagtccaaccaccaac
ttgtcgtcattttcgccgacaccccaactaattggaccagtaaaacacaatggacaactt
caaattcctgatcctaaatcgtcagcaacattgctcgaaggaattttacaaaatctttca
attcctgaggactcctctagaccgtcagaaattgtaaatagacattcatgccattgtgat
gatggagttactgctacctcatattgttcttattgtaatgattatttatgtgcaaaatgt
gtttctgcgcacaatagagtgaagctgacaagagatcatcccattgaaagcattaagaat
ccagatattgacacttcaagtgatttttctaactacctcgcattcaatacaagatcatca
caacaaacatgcaatgaacataatggtggaattcttcagttatattgcgaactgtgtgca
acggcaatatgcaacaaatgtgctattttaaatcacagtggacataatattcaatattta
caacaagttatggaaggcagtaaaactgcattgctctcactgatatcccagtcaagggct
aaaactgacttgtatgaaaaactttcgaaagatgttcttgcaacgataaaaaatttagag
atgcaaactggtgcaatctgtgttgatattaaaacagtatttcataatttaatgtcgctg
ttaggacaaagagaacaggaactcataaacaatgttcacaaagttcaacaggttaaattt
catgcattaaacagacaatatgaagaaataaatgaacgttcaacaaaacttgtaaagtta
actgatgaaatcaaaaataattttgagttttcaaatgatatcgatatattgaaagctaaa
aatactctcatgagagagttagttgtcacagaacaacagttatctaaaattacctcacct
tatgaagacgaatctgtagcctttctacctcctgatcctaatataaagacaactctggga
aaacttggtaaaatatcctgtgaagcatctgccactttttctgccatctccaaaagttcg
ttcaagggtgctgtctgcaaccaaatggcctatttgacagttgcaattaataatcatctg
agggaaccatgcaactctacaaacttactacatttcaatgtgactgatcctaacggcaat
tcagtacatcacgaagtgattgaaaataataatggaacatgtagccttaaattttgtcct
gctcaagaaggaattcataaaatatcatgttcaattcgtgggaaggatatactagagagt
cctttgaatattcctgtccaaacagcaagacctcacatttcatctggcagttcacctcga
ttttccttcggtggaactggagaaaaagatggtcaactttgtaggccttggggaatagca
tgcgatccagctggaaatttcattgttgctgatagaagtaacaatagaatccaaatattt
tcatccaaaggtgaatatattcgtaagttcggagcatccggttcgtaccctggacagttt
aaccgtccagcaggcttgtccgtagatgtgcataatcgtattgttattgctgataaagat
aatcaccgcattcagctattcaccctcgaaggagagtttttgttctcatttggtgaaaga
ggatcgaaaagtggacagttctattatccttgggatatcgctaccaattctaacggcgtt
attgctgtcactgatacacgcaatcaccgaattcaaatattcaatccatatggaaaattc
attggaaaatacggcttcgaaggagttttatggaaacattttgattctccgagaggaata
gcattcacgaatggagacgcaagtctgattgtaaccgacttcaataatcatcggttagtg
attgtacagtcggatctgcaatcggcaaggttcctcggatcagaaggctctcagccgtca
caatttttgagacctcaaggtgtcgccattgatgatcgtggaaactacgttgtggctgat
tccagaaacaaccgtttacagatattttctccgactggcactatcatcgcaatactcgga
ggagttttaggaagcggatctgaagagatggatcgaccttcagggattgctgtcgctcct
gatggtggtattgcagttgttgacttcggaaataacagaattcttgtatactga
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integrated database retrieval system
