Styela clava (leathery sea squirt): 120341293
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Entry
120341293 CDS
T07291
Name
(RefSeq) FRAS1-related extracellular matrix protein 1-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120341293
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
sclv04091
]
120341293
Lectins [BR:
sclv04091
]
C-Type lectins
Lecticans
120341293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Big_9
Calx-beta
Motif
Other DBs
NCBI-GeneID:
120341293
NCBI-ProteinID:
XP_039265720
LinkDB
All DBs
Position
Unknown
AA seq
2229 aa
AA seq
DB search
MEINLLLPFAGILLSLISSISTGIVERNLDLEVTNGRTVYIRKSHLRFATSPGEVCKVQV
VQNEPIYQRVGEFTPKVFDCDYLKNSLKYQHNGSPLLSEDSVKLRVNRLLVNETIQETFY
LIIRIIHSECDVIKIGRRELVVPEMNGVSNTINKDILQFNYDRMFNTKCQIQIETTKYNF
PQMGQLVVKAKQPKENREYEPTGVIISDCDDFLLKEIRYQHLVPPTPDVDYIPLLVTITD
KRSRYILKQEQHWLPVRIRGAFPNEVPRPSYSNINILEVDQFVTTNILSMTMSASDLETD
NDKLIFNITRPPKKGFITHLNDESKPVESFYQKDIGALKIAYQPPNTSFSERETFIVEFR
VYDSQFGVSQIIQVMLSVRVSHTTAPRISWNMGLTMLEGQSRCINKDCLQIMDSDSISSV
RITLAGGLQHGRLYVDNKPGYSFSWSDIESNKVIYKHDDSDTTRDYIMFQVSDGFHSTRF
KLPVEILPKDDSPPVLVNNIVFEVAEGQIISIYHFMLEAYDQDSSSDYIKFNITSPPKAG
QIMKIRQGERAGWEVQKFDQKDLNEGNIYYKHMGDEAFDDSFDFVLMDSHKPYPNISPTQ
TVSVKITPVDDQPPKPIPGITRSLTINETDVAFITPEMLSYIDEENLNSEIKYILTTEVE
LLSALDNNNEHNNKTDAGHLFYADDMIMLMKAPSVPKLKMFSQHAVNHNKVVYMPPMQDI
GLSPMDVHFEYSVTDEHGTTLTGEQFFITVLPVDNQSPTLSVKKLKVQEGGTVVLSVRSI
QLKDVDTEINQLKFILNKSPKNGFVEKYGKMMTVGDTFAYPDIDEFGILYTHNGQEAFTD
MFELIATDGFQNSTLAVVDITILPVDDERPVFGQSTKLRVNESGSAIITSNHLRATDLDT
DDQKLIFQIAGLPQFGKVLVDEEESVSFTQQDVIENRVKYQHNGNEIGYTPTHDIVSFIV
FDKDMNYEDSLESLYTGDDLYENGPMETLDLNITIYPVNDRPPNIILGSAIFNCDEGGRH
ELTPEHLWANDLDTPQENLVFKISPPEFGRIEDNTPREGYEKQISVPVTSFTLQKLQSGN
IFYVQSKHRGIEPTADTFLVHVSDGKHQSAEIPFLIAIVPTNDELPEVRVSNFSCGEGGM
FSLSESVLSIVDLDIPADEVMISVESPPTHGMLIDEMELQRAKRSSKRAANKNSLMNEME
HVSEFSLNDWSNHRIQPAYVHDGSETANDNFQLKVSDGKNVLMKEMGVNVVLVNDEKPAI
VTNKGLTLELGDTEVLSNVVLYSTDADSSKTELFYILHSIPTQGKLQVRTPATDEWTNLQ
VGDSFTEEDVSNNWVQYVHSNVFSTKGRDSFRFSVTDGSWTTKRQNFEITIKHKEKSTVH
VVTNPATVDEGNRFYITTDILSAKDGFDRPEDISYEIISDPMLGQVEHISDFYTPIKLFT
QLDLMARKIVYRHMSLDDSVLDSFTVAASNGINTKEAVVTVQIETVDDMLPLLVLFAARV
NRNENSYLTVFRGSSVTINIMTILISDNDTPKNRVRIVITSFPEHGNLILNGETLSSNGT
FEVTQLQLQNSDLMYENNGDMSEIDRFSFIVTDGVHEGYMIDDVLTLEPSVFNIKVEQID
DTPPSVTYNIPTRSINPYPYGSSSSRYAVFISAGCLAVSDGLRSDHDEEILFSVTEPPLY
GMIQKLGENSKLMNVTEFTMGEVSARKVLYMIDGKLNVTNDSFVFDIQDDWGNVLMGTRF
SMSWSRIELVEKELTVCEGVNDANITIRRYGEVLLSSFIGVKTININSDGAYYDFVPSTA
KQVQFDSHVRSKAWTFRVVDDRVRERKEKFKIVLHSPVDSVLEPLSKEVTVTILDARIRK
CNQNSTTIAKPRKSSSKKKNKKSKNRKRKSKKRRRNAKKRNKKKSKKPVKDEPSSSTSKR
SSKKKKKYGKLGQPVTVAPDTYSSNKTHRIWKYHGLIPITIDEEDEEVEEKQPKGGGEFN
QFILTYVKQYFQPSSKDDIPNDELINDEPHMENRKNLNKDSFEAELLHRPDIPIPPDIPR
PQHVPRTCSIYMFDRLYYDPMAKSLMRCNGASWVPWSPSKSKATTPLKLSECEKDWHKYE
SRCFYIHIGDESGHSWNSAQRSCREVHGAQLATISSKKHMDWLRKKSGKQMLWIGLNKKL
SDDWQWTGGDAVEFTNWKGGYQKQLNKPGKMKSNNADCAMIAERKRWIPKDCSLQINSAG
YVCMTEMLS
NT seq
6690 nt
NT seq
+upstream
nt +downstream
nt
atggaaataaatttactcctaccgttcgcgggaatattactatcgttgatttcaagtata
tctaccgggatagtcgaaagaaatttggatctagaagttaccaatggaaggactgtttat
attagaaaatcgcatttgagatttgctacaagtcccggcgaagtctgtaaagtacaagtc
gtacaaaacgagcctatttatcaaagagtcggcgagttcacacccaaggtgtttgattgt
gactacctcaaaaattcattaaaatatcaacacaatggatcaccactcttatcagaagat
tccgtcaaattacgagttaacagacttcttgttaacgaaactattcaagaaacattttac
ctcataataagaattattcactctgaatgtgatgtcatcaaaattgggagaagagaactt
gtggttcctgagatgaatggggtgtcaaatactattaataaagacattctacagttcaac
tacgatcgaatgttcaacacaaaatgtcaaattcaaatcgaaacaacaaaatacaatttt
ccgcaaatgggacaattagtcgtcaaggcaaaacaaccaaaagaaaatagggaatatgaa
ccgactggtgtaattatttcagattgtgatgatttcttactgaaggaaattcgttatcaa
catttagttccacctactcctgatgttgactacattcctctgcttgttacaatcacagac
aagcgatctcgttacattttgaaacaagaacaacattggcttcctgtgagaataaggggt
gcattcccaaatgaagtacccaggccaagctacagtaacataaatattttagaggttgat
caatttgttacaactaacatactctcaatgacaatgtcagcctcggacttagagacagat
aatgacaaattgatattcaacatcaccagacctccgaaaaaaggtttcatcacacatcta
aatgatgaatcaaaacctgtggaatctttttatcaaaaagatattggtgctctaaagatc
gcttatcaacctccaaataccagtttctcagaacgagaaactttcattgtcgagttcaga
gtgtatgacagtcaatttggtgtcagtcaaatcatacaggttatgctttctgttcgagta
tcacacacaacagccccaagaatatcttggaacatgggtcttactatgttggaaggacaa
tcaagatgtattaacaaagattgtttgcaaattatggacagtgattcaataagctctgtt
agaatcacacttgcaggaggattacaacatggtagattatatgttgataataaaccaggt
tattcattctcctggtctgatattgaaagtaacaaagttatttacaaacatgatgattcc
gatacaactcgtgattacatcatgtttcaagtttctgatggatttcatagcacaagattc
aagttgccagttgaaattttaccaaaagatgattctccccctgttcttgtaaacaatatt
gtatttgaagtggcagaaggccagattatcagcatttatcatttcatgttggaagcatat
gatcaagattccagttctgactatatcaagtttaatatcaccagtccaccaaaagctggt
cagattatgaaaatacgtcaaggagaaagagctggatgggaagtacagaagtttgatcaa
aaagatctcaatgagggaaatatctattacaaacatatgggagatgaggcatttgacgat
tcatttgattttgttcttatggacagtcataaaccttatccaaatatttcaccaacccaa
accgtgtctgtgaaaatcacaccggtagatgatcaaccaccaaaacccatacccggtatt
acaagatctctaacaataaatgaaacagatgttgcattcatcaccccagagatgttgtct
tacattgatgaggaaaatctaaattcagagatcaaatatattcttactactgaagttgaa
ttgttatctgccttagataataacaatgaacataataataaaactgatgctggtcatttg
ttttatgctgatgatatgataatgctcatgaaagcaccttctgtacccaaactgaaaatg
ttctcacaacatgcagtgaatcataataaagtggtttatatgccaccaatgcaagatatt
ggtttgtctcctatggatgttcattttgaatattcagtaactgatgaacatggaacaact
ctcactggagaacaattttttattactgttttgccggttgataatcagtcaccaacattg
tcagtgaagaaactaaaagtccaggaaggagggacagttgttttatctgtcagaagtatt
caattaaaagatgttgatacagaaataaaccaactgaaatttattctgaacaaatctcct
aagaatggatttgttgaaaaatatggaaagatgatgacagttggagatacttttgcatat
cctgatattgatgaatttgggattttatatactcacaatggacaagaggcttttactgat
atgtttgagctgattgcaactgatggatttcagaattcaacacttgctgttgttgacatt
acaattctacctgtggatgatgaacggccagtatttggacaatcgaccaagttgcgtgta
aatgaaagtggttctgccatcattacatctaatcatcttcgtgcaactgatcttgatact
gatgatcaaaaacttatatttcaaatagctggtttaccgcaatttggcaaagttcttgtt
gatgaagaggaatctgtttcttttactcaacaagatgttattgagaacagagtaaaatat
caacacaatggaaatgagattggctacacacctactcatgatattgtttcatttattgta
ttcgacaaggatatgaactacgaagactcacttgagagcctatataccggtgatgatctg
tatgaaaacggccctatggagacactagacctgaatataacaatatatcccgttaatgat
agacctccaaatattatcctcgggagtgcaatctttaactgtgatgagggaggaagacat
gaacttacgccagagcacttatgggcgaatgatttggacacaccacaagaaaatttagtt
ttcaaaatttctccacctgaatttggcagaatagaagacaatacaccaagggaaggttat
gaaaaacaaatcagtgttccagttacctcattcactttacagaaacttcagtctggcaat
atattttatgttcaatcaaaacatcgaggaattgaaccaacagctgatacttttttagtt
catgtttcagatggaaaacatcagtctgcagagataccatttctaattgccattgttcca
accaatgatgaattaccagaagttcgagttagtaatttttcttgtggtgaaggcggcatg
ttctcactatctgaatctgttttaagtattgtggatctggatatcccagcagatgaggta
atgatatctgttgaatccccaccaacccatggtatgttaatagatgaaatggaactgcag
agagcaaaaagatcaagtaaaagagccgcaaacaaaaacagtttgatgaatgaaatggaa
catgtttcagaattttctttgaatgactggtctaaccatagaattcaaccagcatatgta
catgatggatcagaaactgctaacgacaattttcaacttaaagttagtgatggaaaaaat
gtactcatgaaagaaatgggagtgaatgttgttcttgtcaatgatgaaaaaccagcgatt
gtaacaaacaaaggattgactttggaacttggtgacacagaagttttaagcaatgtcgtt
ctgtattcaactgatgccgattcatcaaaaacagaattattttatattttgcattctatt
ccaacccaaggaaaacttcaagtgagaacaccagccacagatgaatggactaatcttcaa
gttggtgattcctttaccgaggaagatgtttcgaataactgggttcaatatgtacattct
aatgtcttctcaacaaaaggcagagattcattccgtttttctgttactgatggttcttgg
acaacaaaacgacaaaattttgaaatcacaatcaaacataaagaaaaaagtactgttcat
gttgttactaatcctgccacagttgatgaaggaaataggttttatattacgactgatata
ttgagtgcgaaagatggattcgatcgacctgaagacataagctatgaaattatatcagat
ccaatgttgggacaggttgaacatatcagtgatttttataccccgatcaaattgtttaca
caattagatttgatggctcgaaagattgtttatcgtcacatgagcttggatgattccgta
cttgattcatttacagtcgcagccagtaatggtattaatacaaaagaagcggttgtgact
gtacaaattgaaactgtggacgatatgttgccccttttagttctttttgcagcaagagtg
aatagaaatgaaaattcatacttgactgtattcagaggatcttcagttactatcaatata
atgacgattttaatttctgataacgatacaccaaaaaatcgcgttcgaatcgttattaca
tcgtttcctgagcatgggaatcttattttgaatggtgaaaccctatcaagcaatggaaca
ttcgaagtaactcagctacaacttcaaaattctgacctcatgtatgagaacaatggcgac
atgagtgaaattgatagattttcgttcattgttactgatggtgtacatgagggatacatg
attgatgatgtattaacgcttgaaccatcggttttcaatataaaagttgaacagattgac
gacacacctccatcagttacctacaatattccaacacgttccattaatccatatccatat
ggcagcagttcttcacgatatgcagtttttataagcgctggatgtttggctgtttctgat
ggtctgagatcagatcatgatgaagaaattctattttcagttaccgaacctcctctatat
gggatgatacagaagcttggtgaaaactcaaaattgatgaatgtgacggaattcaccatg
ggagaagtatctgctaggaaagtgttgtacatgattgatggaaaattgaacgttacaaat
gatagttttgtattcgacattcaagatgattggggtaatgttttaatgggaactagattt
tcaatgtcatggagcagaatcgaattagtagagaaagaattgacagtttgtgaaggagta
aatgatgcgaacattacgataagaagatacggcgaagttttattatcatcatttatcgga
gttaaaactatcaatattaattccgatggtgcatactatgactttgttccaagtactgca
aaacaagttcaatttgactcacatgttagatcgaaagcgtggactttccgagtagttgac
gacagagttcgtgaaaggaaagagaaattcaaaatcgtcctgcattcacctgttgattct
gtattggagccactaagtaaagaagtcacagttacgatattagatgcaagaattaggaag
tgtaaccagaattcaacaacaatagcaaaaccgagaaaatcatcctcaaagaaaaaaaac
aaaaaatccaagaatagaaagaggaaatctaagaaaagaagaaggaatgccaagaaacga
aataaaaagaaatccaagaaacctgttaaagatgaaccatcttcatcaacatcaaagcga
tccagcaaaaaaaagaaaaaatatggaaaactgggacaacctgttacggtggctccagat
acttactcaagcaataaaactcatagaatatggaagtatcatggtttaataccaattaca
attgatgaagaagatgaagaggtggaagaaaaacaaccaaaaggaggaggtgaattcaat
caattcatacttacttatgtcaaacagtacttccaaccttcatcaaaagatgacataccc
aatgatgaattaataaatgatgaacctcatatggaaaataggaagaatttgaacaaagat
tcctttgaggctgagctgcttcaccgacctgatattcctatacctcctgatataccaaga
ccccagcatgtacctcgcacatgttctatttatatgttcgatagactgtattatgatcca
atggccaaatcattaatgagatgtaatggtgcatcatgggttccatggtcaccatcaaaa
tcgaaggctacaactccattgaaattgtcagagtgtgaaaaagattggcacaagtatgaa
tctagatgcttctacattcatattggggatgaaagtgggcattcatggaattctgcacag
agatcatgcagagaagtacatggtgctcaattagcaacaatatcatcaaagaaacatatg
gattggttgagaaaaaaaagtggaaaacaaatgttgtggattgggctgaacaaaaaactc
agtgacgactggcaatggacagggggtgatgcggtagaatttacaaactggaaaggagga
tatcaaaaacaactaaacaaacctggtaaaatgaaatcaaataatgcagattgcgcaatg
attgcagaaagaaagagatggattccgaaggattgttccttacaaattaacagcgctggt
tatgtttgtatgacagaaatgctttcttag
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integrated database retrieval system
