Styela clava (leathery sea squirt): 120341486
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Entry
120341486 CDS
T07291
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31-like
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120341486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sclv03041
]
120341486
Spliceosome [BR:
sclv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
120341486
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Bcr-Abl_Oligo
Motif
Other DBs
NCBI-GeneID:
120341486
NCBI-ProteinID:
XP_039265935
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MSLADELLADLEDAGMDGEVAMEEEHQLEDDSDGIDDIDDIDDLDSGQKATDSESIHHVA
RLNGSDQFKRVMGRIAEILDKNEPVSSAGPVESNPEYQLIVESNNLTVEIDNEINIIHKF
CRDNYMKRFPELESLVPTPLEYIRTVKELGNDLERCKNNEVLQQVLSNATIMVVSVTAST
TQGKQLDEYEEKRILEACHMSEDLILAKMKILEYVEARMSFIAPNLTIIVGASTAAKLMG
AAGGLIALTKMPACNIMLLGSQKKTLTGFSSTAINPHTGYIYYSDLVQNIPTDLRRKAAR
LVSAKVTLAARIDSFHEAPDGKSGFNLKEEIERKLEKWQEPPPVKQIKALPAPIDPGRKK
RGGRRYRKMKERLGMTEMRKQANRMTFGEIEDEAYQQNLGFSLGQLGKKGTGRIRAAQVD
NKTQVKVSKTLQQKIQKANRAGAASTWGGKTSIRDRGSGTASSVAFTPLKGIEIVNPSAS
EKRVDEEALADGKKSYFASGAAFIKVETPAT
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggctgatgaacttttagcagatttggaggatgctggaatggatggagaagtt
gcaatggaagaagagcatcaactggaagatgattctgatggaattgatgatattgacgat
atagatgatcttgattctggacaaaaagcaacggattctgaaagcattcatcatgttgca
aggttgaatggaagtgatcaattcaaaagagtaatgggtcgaatagcggaaattcttgac
aaaaatgagcctgtatcatcagcaggtccagtagaatctaatccagaatatcagcttata
gttgaatcaaataatttaacagttgaaattgataatgaaatcaatattatacataaattt
tgcagggataattatatgaaaagatttcctgaacttgagtctcttgttccaacacctcta
gagtatattcgaaccgtaaaggaattaggaaatgatttggagagatgtaaaaacaatgaa
gttttacaacaggtattatcaaatgccacaattatggttgtgagcgttactgcttctacg
acccaaggaaaacagttagatgaatacgaagaaaaaagaattttggaagcgtgtcatatg
tcagaggatttaatactggctaaaatgaagattttagaatatgttgaagccagaatgtct
ttcattgcaccaaacctcacaatcattgttggagcctcgacagctgccaagttaatggga
gcagcagggggtcttattgccttgacaaagatgcctgcatgtaatataatgttacttgga
tctcaaaagaaaacattaactggattctctagcactgctataaatccccatacaggatat
atttattacagtgacttagttcagaacattcctacggatttaagaagaaaagcagcaaga
cttgtttctgccaaagtaactctagcggctcgaattgacagttttcatgaagcaccagat
ggcaaaagtggattcaatttgaaagaggaaattgaaagaaagttagaaaaatggcaagag
ccacctcctgttaaacagattaaagctcttccagctccaattgatccaggacgaaagaag
agaggaggtagaaggtatagaaaaatgaaagaaagacttggaatgacagaaatgagaaaa
caggccaatagaatgacttttggtgaaattgaggatgaagcttatcaacaaaacttggga
ttttcgctcggtcagcttggaaagaagggaactgggagaataagagccgcacaagttgac
aataaaactcaagtgaaagtatcaaaaacattacaacaaaagattcaaaaggcaaatcga
gcaggtgccgcaagcacttggggagggaaaacatcaataagagacagggggagtggaaca
gcatcatctgtggctttcactcctttgaaaggaattgaaattgtaaatccaagtgcatcg
gagaaacgagtggatgaagaagctttggctgacggtaaaaagagttacttcgcaagtggt
gctgcttttattaaagtggaaactccagcaacatag
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