Styela clava (leathery sea squirt): 120341630
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Entry
120341630 CDS
T07291
Name
(RefSeq) uncharacterized protein LOC120341630
KO
K08737
DNA mismatch repair protein MSH6
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
120341630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sclv03400
]
120341630
DNA repair and recombination proteins [BR:
sclv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
120341630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kinesin
MutS_V
MutS_III
MutS_I
Microtub_bd
PWWP
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
120341630
NCBI-ProteinID:
XP_039266109
LinkDB
All DBs
Position
Unknown
AA seq
2526 aa
AA seq
DB search
MSEPPPDVIPVRAVVRGRPLIPKEVDEGCQTCLDFFMEENRVMVNGSKSFTFDNVFSADV
SQADVYDIAVKPLTEGFFKGFHATVLAYGQTGSGKTYSMGSAHSATASIDDVTTGIIPRV
INDIFDGINDRPNHNFTVKVSYLELYMKSLNDLLCSRTDRQQIVIRDADDGGTHISGLTE
LVVANVKETFAAMDCGNSHRTTAATAMNLVSSRSHAIFTILLESVNREDENDKVSCKFHL
VDLAGSERAKRTKAEGERLQEGIRINEGLLALGNVISALADENLRSGHIKYRDSKLTRIL
QGSLGGNSHTLMIACVSPADSNHEETINTLRYADRVRKIKNRPVVNRDPQAALIASLKKQ
IQNLKLQLLERGLEYQPLGAESIAPSESTSALQQKIKKLSNDNDKLTEQLQQSVENYSEM
CEKAIVTEMCYDKMREQFSEITKSARGLLDEFPDMYVINEENESMKERYQKLLSLHKMIL
KTHPMGAEELMETALHGNDETLAPNEDGSIQGDTVLEATTSVDPQNMTHAMTSEHAMKKA
DLGKQLQELSKALSIKEELAKRLTSNDAQISAMKGEFEAKLQSLAKEKASLELALQQAQK
TNESRKLSEKRRQRLNELTAEIQTLKKEKREKEKLVRMKNESDRSIERLHTEIRDMKRNR
VNLMKQIKAENEKFNAWKKEKTKEVKQLQEKNRKRNFEYVKLERTYDKQKAILRRKTEEA
AAANKRLKEALSRREAAASKRKASEKRTMETIGPKIRVWLDEEIEVRTSIREVEHHEKVL
INDRTALAKELKECTDSPKKRRRTFDAETDIRGSNRKLEIRQEIELKSAHIQSLQNKLSE
AKEHLNSNTKWANIGTLVDAKYAIKYLMKLAVDAKIENSLQKDEAANMKREREAAEEIVR
DLQNQLRQTINRHEMDKTLLQQSHAVQVSDLLAECTFSKSNSFRETPDNSQTEISKYQKE
NKLLKQERNILHKKLLEKRASSTSAPSPGKNQSFFMPIKLIDKSVEDIFEEQDETFELDE
EDTDSEYAPTPKKKRRRTGVVSGCKCSKSKFRCKNSLCGCVKRNSKCGKNCSCSDVGSAC
YNQGEGMINDAANVTFDVEAEKSSTPTFLFPKLEGGDKENNPDIIPRTPLSGLENSTKYN
PVYFQSPIVDEPSADSQTEVYKCKNIGHKMPKTLLHFFSPKSVKKEENGTSSPKSNSGTP
LKPKNTFLTPKSEGKILSKKTFLTPKSEGKIPSKKSPFFSPMVPAKTIECNVCDIVWAKL
DGYPWWPSIVCNDPTDGVHEKMERKKKFIHVQFFDNPVTHAYVEAKNVELYNGSQSLDFQ
IGGKFYSSDLDVIEATKKGDEALKKGVEGREKLLVKFEDSFDDFADDLDDVLADACDNSV
ASSNNEVSMEIEEGKRPKRKAVKKAASKRRRIETHSDEDDCVSEEDFDPNKESESDESDG
DVGEESSDLATESEPDDSPIKDSRKRKRKGSLPASKISNTPSNPKLAAFNPTTSTTSRTP
LVCQQTKSRLSLFQASETEGSMGDDLETTKYLHETLEFLFPENLRDKHGRKTGDPDYDST
SLKIPQEFLKKCTPAMFQWWKLKVDHFDVIFCFKVGKFYELYHMDAVVGVNELGLIYMKG
SFAHSGFPEVAFGRYSESLVQKGYKVARVEQTETPEQNAIRIKKEMPSKQEKTLRREICR
IVTKGTQSLGSWPGSGNMHSGNNFLLAVTEKSSGGNNFQEGVNSNVCREFGICFIDTSVG
LFHIGQFMDDRHCSALCTMLSHYTPCQILFERGHLSASLQKILRSGLSSILQEPLLPGTQ
FWDATKTIKFLKTEGYFEKNGEDEWPTALKSMMQDAEAVSFSAAKNYELAISAFGACVFY
LKKCLIDYEVISMKQFVEYRPPKSGDPQDVAQELEDAVANFAKGDNKMILDSVTLANLEI
LENTNGGTEGTLIERLDHCHTAFGKRLLRQWLCAPPCNPEVSSDRLDAVEDLMGCQEFIS
ETNEVLKKVPDLERMLMKIHSLSKDSKKPDHPDNRAVLYEEDKYSKKKIEDFLTILQNYE
CVHKLLVRHQDLVKSFRSSLLQKILGLSSGNGNFPNMSDTLKRWKTAFNHTKAVETGKIT
PNHGANPEYDSALDEIADIQAKLNSYLKEQKKHIGCSSIVYKGTGNKRYQLEMPIDVADR
KNLSGYTISGQRKGFKSFRTAETEEFLKEMEAAEARRDSAQSETMAIIFREFDQDFAMWN
SAVQCLSILDVLLSLTEYCKNSEIQMCRPILSWKGANTSPFLDISTGRHPCVTRTFFGDD
FIPNDTLLGCQGDDNDVTNNPNCLVLTGPNMGGKSTLMRQVGLIVVLAHLGCYVPAEHCR
LSPVDRVFTRLGASDRIMSGESTFYVELSETSAILKHATKHSLVLLDELGRGTATYDGTA
IALAVVREIAANIKSRTIFSTHYHTVVDDLKANADVKQGHMACMVENEDADNEDPSKETL
TFLYKLTDGPCPKSYGFHAARLADVPESVITLARHKAAELESNNNNVSLFRSICQGNMPE
MNNVAL
NT seq
7581 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccacctccagatgttatcccggtacgggcagtcgttcggggacgacctttg
atcccaaaggaagttgatgagggttgccaaacttgcttggacttcttcatggaagaaaat
cgtgtgatggtaaacggtagcaaatcctttacctttgataatgtattttcggcggacgtg
agccaagctgatgtttatgatatcgctgtaaagccccttacagaaggatttttcaaagga
tttcatgcaactgttttagcatatggacaaacaggcagtggaaaaacatattctatggga
tctgcacattccgcaactgcttcaattgatgatgtaactacaggaattatacctagagtt
attaatgacatttttgacggaattaatgatcgtccaaatcataatttcactgtaaaagtt
tcctatcttgaactatacatgaaaagtttgaacgatttgctatgttctcggacagatcgg
caacaaattgtaattcgcgacgcagatgatggcggtacacacattagcggactcactgaa
ctcgttgtggcgaacgtaaaagagacatttgctgcaatggattgcgggaattcgcatcgt
acgacagccgcgactgcaatgaatttagtgtcatctcgttcgcatgcaatttttaccatt
cttcttgaaagtgtcaatagagaggatgaaaatgataaagtgtcctgtaagttccatctc
gttgatctcgctggatccgagcgagcgaaaagaacaaaagcagaaggagaacgcttacaa
gaaggcatcagaattaacgaaggtctacttgcgttaggaaacgtcatcagtgctttggcg
gatgaaaacctacgttctgggcatataaaatatagagactcaaaattgactaggattcta
caaggttcgttgggaggcaacagtcatactctaatgatcgcttgtgtgagccctgcagat
tcaaatcatgaagagacgataaatactttgcgatatgcagatcgtgttcgtaaaattaaa
aatcgtcctgttgtgaatcgggatccacaggctgctttaattgcgtcgttgaaaaagcag
atacaaaacctaaaattacagcttttggaacgtggattagagtatcaacctttaggagca
gagtcgattgcgccttcagaaagtaccagtgccttgcaacaaaaaataaagaagttgtcg
aatgacaatgacaaacttactgaacaattacaacagagcgtagaaaattacagtgaaatg
tgtgagaaagccatcgtgaccgagatgtgttatgataaaatgagagagcaattttcggaa
attactaaatctgcacgcggattacttgatgagtttcctgacatgtatgtgataaatgaa
gagaatgaatctatgaaggagcgttaccagaaacttttatctctacataaaatgattctg
aagactcatcctatgggggcagaagaattaatggagactgctttacatggaaatgacgaa
actctggctccgaatgaggacggttccatccaaggtgacactgtgttggaagccaccaca
agtgtagatcctcaaaatatgacgcatgctatgacaagcgaacatgccatgaaaaaggct
gatttaggaaagcagttacaagagttgtcaaaagcactttcgattaaagaagagctcgcg
aagcgtttgacgtcaaacgatgctcaaatcagtgcaatgaagggagaatttgaagcgaag
cttcaatctttagcgaaggaaaaagcaagtttggaacttgcgctacaacaagcgcaaaaa
acaaatgaaagccgtaagctgagtgaaaaacgaagacaacgtttgaatgagttaacagct
gaaattcagacccttaaaaaagagaaaagggaaaaagaaaaattggtacgaatgaaaaac
gaaagtgatcgctcaatcgaaagactacacaccgaaattcgagatatgaaacgtaacaga
gtcaatttgatgaaacaaattaaagctgagaatgaaaaatttaacgcgtggaaaaaagag
aaaacaaaggaagtcaaacaactccaagaaaagaacaggaagcgtaatttcgaatacgtg
aaactggaaagaacgtacgataaacagaaggcaatcttaagaagaaaaacggaagaagca
gccgcggccaacaaacgccttaaagaagctttgagcagaagggaggctgctgcctcaaaa
cgtaaagcttcagaaaagcggaccatggaaaccataggaccaaaaataagagtgtggttg
gatgaggaaattgaagttcgtaccagcataagagaggttgaacatcatgaaaaagtgctt
attaacgatcgtactgcattggcaaaagagttgaaagagtgtacagattcgccgaagaag
cggagacgaacattcgatgctgaaactgatatacgaggctcaaacagaaagctcgagatt
cggcaagaaatagaattaaaaagtgctcatattcagagtttacagaataaattatcagaa
gcgaaagagcatttaaactcgaacacaaaatgggcaaatattggaactcttgttgatgct
aaatatgctatcaaatatttaatgaagttagcagtggatgccaaaattgagaactctcta
cagaaagacgaggccgcaaatatgaaacgggaacgtgaggccgcagaagaaatagtgaga
gatcttcaaaatcaactacgacaaactatcaacagacatgagatggataaaactttattg
caacaaagccatgcggttcaggtctcagatttgctcgcagaatgcacattttcgaagtca
aatagtttccgcgaaactcccgataacagccaaactgaaatttcaaaatatcaaaaagaa
aataaacttctcaagcaagaacggaacatattacataaaaagttattggagaaacgtgct
tcgtcaacttccgctccttcgccagggaaaaaccaatcattttttatgccgatcaagctt
attgacaagtctgttgaagatatttttgaagaacaagatgaaacctttgaactggatgag
gaggacacagattcagaatacgcaccaactcccaagaaaaaaaggagaagaaccggtgtt
gtttctggatgtaaatgctccaaatccaagtttcgttgtaaaaattctttgtgtgggtgt
gttaaacggaacagcaaatgcggaaagaattgcagttgttcagatgtcggatcagcgtgc
tataatcaaggagaaggaatgataaatgatgccgcaaatgtaacctttgacgtagaggcc
gaaaagtcttcaactcctacatttcttttcccgaaacttgaaggcggtgataaggaaaat
aaccccgatatcattccaagaaccccgttatctggactcgagaactccacaaaatataac
ccggtatatttccaatcacctatagttgatgaaccatctgcagattcccaaactgaagtt
tataaatgtaaaaatataggccataaaatgccgaaaacattgcttcattttttctcccca
aagtcggtcaaaaaagaagaaaatggcacgagctcaccaaaatcaaactctgggactcca
ttgaaaccaaaaaacacgtttttaaccccaaaatctgaaggaaaaattctatcaaagaaa
acctttctaacccccaaatctgaaggaaagattccttcaaagaaatcaccatttttttct
cctatggttccagcaaaaacgattgaatgcaatgtctgtgatattgtttgggctaaatta
gatggttacccatggtggcctagcatagtttgcaatgaccccacggacggcgttcatgaa
aaaatggaaagaaaaaagaaatttattcatgttcagtttttcgacaatccagtaactcat
gcctatgtagaggcaaaaaatgttgaattatataacggttctcaatctcttgattttcaa
attggtggaaaattctatagttcagatctagatgtcattgaggccacaaaaaagggggat
gaggccttaaaaaagggggtggaaggccgtgaaaaattgcttgttaaatttgaggacagt
tttgacgattttgctgatgatttagatgacgtgttagctgatgcgtgtgacaattctgtt
gctagtagcaacaatgaagtttccatggagattgaagagggaaaaagaccgaaacgaaag
gcggtaaaaaaagcagctagtaaacgacgcagaattgaaactcactcagatgaggatgat
tgtgtttcagaggaagattttgatccgaataaagaatccgagagtgatgaaagtgatgga
gatgttggagaagaatcttccgatttagctactgaatccgaacctgacgattcaccaatt
aaagattctcgaaaacgaaaaagaaaaggttcgcttcccgcttcaaaaatatcaaataca
cctagtaatccgaaacttgctgcttttaatccaactaccagtacgacctctcgaactccg
cttgtgtgccagcaaacaaagtcacgattatcattattccaagcatcagagacagaagga
tctatgggagatgacttagagactacaaagtatttacatgagacattggagtttcttttt
ccagagaatttacgagataaacatggtagaaagacgggcgaccctgattatgattcaaca
tcattgaaaattccgcaagagtttttaaaaaaatgtacgcctgctatgttccaatggtgg
aaattaaaagtagatcattttgatgtaatattttgttttaaagttggcaagttttatgag
ttataccacatggatgccgtggtaggagtcaatgaattgggactcatttatatgaaaggg
tcttttgcacattctggatttccagaagtagcattcggtcgttattccgaatcgctcgta
caaaaaggttataaagttgctcgtgtggaacaaacggaaacgccggaacaaaatgcaatt
cgaatcaaaaaggaaatgccgtcaaaacaagagaaaacattaagaagagaaatttgtcga
attgtaacaaaaggaacgcaaagtttgggatcctggccaggtagtggcaatatgcatagc
gggaataattttcttttagctgtcactgaaaaatcttcaggaggaaataacttccaagaa
ggagtgaattctaacgtgtgtcgtgaatttggaatctgttttatcgacacttctgttggt
ttgtttcacatcggtcaatttatggatgatcgccactgctctgctttgtgtactatgctc
tctcactacaccccttgccagattttatttgaacgtggtcacctatcagcttcattgcag
aaaattcttcgctcaggactttcctcgattcttcaagagccattactaccaggaactcaa
ttttgggacgcaacaaagacaataaaatttctcaaaacggaggggtattttgagaaaaac
ggggaggacgaatggcccactgctttaaaaagtatgatgcaagacgctgaagccgtcagc
ttttcagcagcaaagaattatgagctagcgattagcgcgtttggcgcttgtgtgttttat
cttaaaaaatgcttgattgattatgaagtcatctcaatgaaacagtttgttgagtacagg
cccccgaaaagtggagatccacaagatgttgctcaagagcttgaagatgctgttgcgaat
tttgcaaaaggcgataataaaatgattcttgatagtgttactttagcaaacctggaaatt
ttggaaaacaccaatggaggtactgaagggactttaattgagcgattagaccactgtcat
actgctttcggtaagcgtttgctccgccaatggctctgtgcacccccctgtaatcccgaa
gtttcctcagatagattagacgctgttgaggatttaatgggatgccaagagtttatatca
gaaaccaacgaggtcctaaagaaggtgcctgatttagaaagaatgttgatgaaaattcat
tctctttcgaaagattcgaaaaaacctgaccaccctgacaatagggctgttctttacgag
gaagacaaatacagtaaaaagaaaatcgaagattttttaacaattttacaaaattatgaa
tgtgttcataaattactagtaaggcaccaagatttagtgaaaagtttcagatcctctttg
ctacaaaaaatattgggtttgtccagcggaaatggaaattttccgaatatgtctgacact
ttaaagcgctggaaaacagcttttaatcacacaaaggctgttgaaacaggtaaaataacg
cctaatcatggtgccaatccagaatatgactcagcattagatgaaattgctgatatacaa
gcgaaactgaatagctatttgaaagaacaaaaaaaacatattgggtgctcgagcatcgtt
tataaaggaactggaaataaacgttaccaattggaaatgccaatagacgtggcggatcgg
aaaaatttatccggttatacaatatcaggtcaaaggaaaggttttaagagttttcgaact
gctgaaacggaagagtttttgaaagaaatggaagccgctgaagcgcgacgagattctgca
caaagtgaaaccatggcgattatatttcgtgaatttgatcaggattttgcgatgtggaac
agcgctgttcagtgtttatctatattagacgtattgctcagcctaacagagtattgcaag
aatagtgaaattcaaatgtgtcggcctatactgtcttggaaaggtgccaatacctcccca
tttttggatatttcaacaggaaggcatccatgcgtgactcgtacattttttggagatgat
ttcatccctaacgatactcttctcggttgccaaggtgatgataatgatgtcacaaacaat
ccaaattgtttggtcctcactggccctaatatgggaggaaaatctactctaatgagacaa
gtgggactcatagtcgtgctggcacatttagggtgctatgttcctgctgaacactgtagg
ctgtcaccagtcgaccgtgtctttacaagactaggggcatcagaccgtatcatgtctggc
gaaagcacattttacgtcgaattgagtgaaacttcagcgattttgaaacacgcaaccaaa
cattctctcgtgctattagatgagttgggccgtggcacagcgacttacgatggcactgcg
attgctttagccgtcgttcgagagattgctgcaaatataaaaagcaggactattttttca
actcattatcacactgttgttgacgatttaaaagccaacgcagatgtgaaacaaggccac
atggcttgcatggtagaaaatgaggacgccgacaacgaagacccgtctaaagaaacttta
acttttctgtataaattgaccgatggaccatgtccgaaaagttatggcttccatgcagca
cgattggctgatgttccagaatccgtgatcactctagcgcgacacaaagcagcagagctt
gaaagtaacaataataatgtgtcattgttcagatctatctgtcagggtaatatgcccgaa
atgaacaatgttgctttgtaa
DBGET
integrated database retrieval system
