Styela clava (leathery sea squirt): 120341681
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Entry
120341681 CDS
T07291
Name
(RefSeq) methionine--tRNA ligase, mitochondrial-like
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv00450
Selenocompound metabolism
sclv00970
Aminoacyl-tRNA biosynthesis
sclv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
120341681
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120341681
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sclv01007
]
120341681
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sclv03016
]
120341681
Enzymes [BR:
sclv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
120341681
Amino acid related enzymes [BR:
sclv01007
]
Aminoacyl-tRNA synthetase
Class I (U)
120341681
Transfer RNA biogenesis [BR:
sclv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
120341681
Prokaryotic type
Other AARSs
120341681
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_1
Anticodon_3
Toprim_4
LiaI-LiaF-like_TM1
Motif
Other DBs
NCBI-GeneID:
120341681
NCBI-ProteinID:
XP_039266187
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MRGIFLNWVTVFSRLNCKCRSNSHAFTTSMRGKSYYVTTPIFYVNSQPHLGHLYTATLAD
VAGRWQRLKNGKEVVFATGTDEHGQKIQEAAAEEEMEPKSFCDKVSGRYKDLYELCNIDY
TDFIRTTDTRHKEAVHAFWKILEDKGYIYKGSYEGWYSTQDENFVTELQTKISAGHRISI
ESGHKVEWVKENNYVFRLSAVIDEVKTWARQNPSCVYPAKFHRVLLENLDAMTGDISISR
ESSRVSWGIETPSDSTQTVYVWLDALINYLTVAGFPDVNGERFRTTWPANCHIIGHDILK
FHAIYWPAFLIAAGLDLPKQIVVHSHWLMNRRKMSKSLGNVINPFNVANSVSGERLKYFL
IKQGVLEHDCDFNHHLLLQSVNGDLCNSLGNCLHRAVAPKLNPDQIYTNFYKDCYPNLIS
FSDKASGEKPSGLINLVQKLPDDVNKFCEDFHFYKAAEAIMECVRESNLLIHRNKTWRLD
LHNARDKKLNDTALHCVYETLRVCGILLQPFVPRIANDMLDRLNVQHHERTFLHATKSFY
GYGNSAEACPMTGRKLGKNRGVLIKKVSKIRF
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggtatttttttgaattgggtgaccgttttttcaaggctaaattgtaagtgtcga
agtaacagccatgcatttacaacgtccatgcgaggaaaaagttattacgttactacacca
atattttatgtgaattcacagcctcatctggggcatttgtatactgcaactctggctgat
gttgctggtcgttggcaaagactgaagaatggaaaagaagttgtgtttgcgacaggaaca
gatgaacatggacagaaaattcaggaagctgctgctgaggaagaaatggaacccaagtcc
ttttgtgataaagtctctggaagatataaagatttgtatgaactatgtaacatagactat
actgatttcatcagaacaacagacactcgtcataaagaagctgttcatgctttttggaaa
attttagaagataaaggatatatctacaaaggctcatatgaaggatggtacagtactcag
gacgaaaattttgtgactgaactccaaaccaaaatatcggcgggtcatagaatatcaatt
gaaagtggacataaagtagaatgggttaaggagaataattacgtattcagattatctgct
gtcatcgatgaagtgaaaacttgggctcgacagaatccaagctgtgtttatcctgcaaaa
tttcatcgggtacttttggaaaatttggatgcaatgactggtgacatatccatatcaaga
gaaagttcgagggtttcgtggggaatagaaactccatctgattcaacacaaactgtctac
gtttggctggatgctttgattaattacttaacagtcgctggatttcctgacgtaaatggt
gaaaggtttcgaacaacttggcctgccaattgtcatattataggtcatgacattctgaaa
ttccatgcaatttactggccagcatttcttattgctgctgggcttgatcttcccaagcaa
attgttgttcattctcactggctgatgaatcgaagaaaaatgtcgaaaagcctgggcaat
gttattaatcctttcaacgtagcgaattctgtatctggtgaacgacttaaatatttcttg
ataaaacagggagttttagaacatgactgcgattttaatcatcacttattgctgcaatct
gtaaatggtgatttgtgcaattcactcggaaactgtttgcatcgagctgttgctcctaaa
ctgaacccagatcagatctacacaaatttttacaaagattgctatccaaatttgataagt
tttagtgacaaagcctctggcgaaaaaccatctggtttaatcaacttagttcagaaattg
cctgatgacgtcaacaagttttgtgaagactttcatttttataaagcagctgaagcaatc
atggaatgtgttcgtgaatcaaatctgttgattcatagaaataaaacgtggaggcttgat
cttcacaatgcaagagataagaaactcaacgacacagctttacattgtgtttacgaaact
cttcgtgtatgtggtatattattacaaccttttgttccgcgtattgccaatgatatgctg
gatagattgaatgtgcagcatcatgaaagaacatttttgcatgcaaccaaaagtttttac
ggttatggaaacagtgctgaagcatgtccaatgactggtcgaaaacttggcaaaaataga
ggtgtacttatcaaaaaagtttctaaaataaggttttga
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