Styela clava (leathery sea squirt): 120341902
Help
Entry
120341902 CDS
T07291
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04145
Phagosome
sclv04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120341902
09142 Cell motility
04814 Motor proteins
120341902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sclv03036
]
120341902
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sclv04812
]
120341902
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
120341902
Cytoskeleton proteins [BR:
sclv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
120341902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Dynein_IC2
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
120341902
NCBI-ProteinID:
XP_039266414
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MSEKSDRKAELERKKAWLAQIRADKLRKKKEEEEKKVVVSSDLEQKRKDAESLLRDIGIS
DTSLVAAAPKSPSKSPAVPAASTTEQDGGKPRHGYSRRTQIFKRTVAQYGDWECQEKDIC
HTEQVSFSLKTSGLDWDQDASLVELQGPRKHAKLELSKITVTSIAPKETVTYAKETQTPV
QQQQQSDDEDEKQDEEKNNIVLEDKLADDDEEKEEEGTRELTEEEKCTIENSEEYLSFLN
RTSRFMERALTHKIDLFTEYNLQQDEESEADKGAKLALNRVFSDERWSRHRLVTCLDWST
QYPELCVASYSSNEDAPYEPDGVALVWNSKYKTASPEYIFHCQSAVTAACFAKFHPNLVV
GGTYSGQIVLWDNRTKKRTPAQRSKLSASAHTHPVFCVDVVGTQNAHNLISISNDGKMCS
WSLDMLTQPQDTMELQHKQSKAVAVTCMAFQPNNVNNFAVGAEDGSVYSACRHGSKTGIS
DAFDGHFGPVTGVDFHCATGQLDFSHLFLTSSFDWTVKLWSLKNGTRKCLHSFEDNNDYV
MDVAWSPAHPSMFASADASGRIDLWNLNTDIEVPAVSVMTDNNSAINEIRWNPAGSQIAA
GDEVGRIHVYDVGEQIASPRNDEWSRFVRTLADIKSNEADEEETLMSRHL
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaatcggaccgaaaggcagaattggaaagaaaaaaggcgtggcttgcccaa
attcgcgccgacaaacttcgcaagaagaaagaggaggaagaaaaaaaagtggtggtatca
tcagacttggaacaaaaaagaaaagatgctgagagtttgcttcgtgatattggcatttcc
gatacatcattagttgctgctgctccgaagtctccgtccaaatctcccgctgttccagct
gcatcgactacagaacaagatggtggaaaaccaaggcatggttattcacgaaggactcaa
attttcaaaagaactgttgctcaatatggtgactgggagtgtcaagaaaaagatatctgc
catactgagcaagtatcgttcagcttgaaaacatctggtctggattgggatcaggatgca
agtcttgtcgaactgcaagggcctcggaaacatgctaaacttgagctcagtaaaatcaca
gtgacttcgattgcaccaaaagaaactgtcacctatgcgaaagaaactcaaactccagtt
caacaacagcaacaatctgatgacgaagatgaaaaacaagacgaggaaaagaacaatatt
gttctggaagataaattagctgacgatgatgaagaaaaagaagaagaaggtactcgagag
cttacagaagaggaaaaatgcacaattgaaaattctgaagaatatttatcgtttttaaat
cgtacatcaagatttatggagagagccctcacacataaaattgatttatttactgaatac
aatttacaacaagatgaagaaagtgaggcagacaaaggggccaaactcgctctgaatcgc
gtattctcagatgaaagatggtcaaggcatagactagttacttgcttggattggagcaca
cagtatccagaactatgtgttgcatcatacagttccaatgaagatgcaccttatgaacct
gatggtgttgcacttgtgtggaatagtaaatataaaacagcaagtcccgagtatattttt
cactgccagtcagcagtaacagcagcttgttttgccaaattccatcccaaccttgtagta
ggaggaacttacagtggtcagattgtattatgggataatagaacgaagaaacgaacaccg
gctcaacgaagtaaactttcagcttctgctcacacacatccagttttctgtgttgatgtg
gttggaacacaaaatgctcataatttgatttcaatttcaaatgatggaaaaatgtgttcg
tggagtttagacatgttgacccaaccacaggatactatggaattgcagcacaagcaatca
aaagctgttgctgtgacttgtatggcttttcagcctaataatgttaacaattttgctgtt
ggtgcagaagatggatctgtgtattctgcctgtagacacgggagcaaaacaggaataagt
gacgctttcgatggtcactttggaccagtaacaggagttgattttcattgtgctactggt
cagctcgatttttctcatcttttcctcacatcctcttttgactggactgtaaaactatgg
tcactgaagaatggaactagaaaatgtcttcattcatttgaagacaacaatgattatgta
atggatgttgcttggtctccagctcatccttccatgtttgcaagcgctgatgcatcaggg
agaattgacctgtggaatttgaataccgatattgaggtacctgctgtttctgtgatgaca
gacaataattctgctataaatgaaattcgttggaatcctgctggatcgcaaatagctgcc
ggtgatgaagtaggaagaattcatgtatatgatgttggagaacaaattgcatctcctaga
aatgatgaatggtccagattcgttcgtactttggctgatataaaaagtaatgaagctgat
gaggaagaaactttaatgtcaagacatctatga
DBGET
integrated database retrieval system
