Styela clava (leathery sea squirt): 120341948
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Entry
120341948 CDS
T07291
Name
(RefSeq) uracil-DNA glycosylase-like
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120341948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sclv03400
]
120341948
Enzymes [BR:
sclv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
120341948
DNA repair and recombination proteins [BR:
sclv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120341948
Prokaryotic type
120341948
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
120341948
NCBI-ProteinID:
XP_039266489
LinkDB
All DBs
Position
Unknown
AA seq
286 aa
AA seq
DB search
MSSQRKISSFFNAAQKKTGNLKRPLKEKEICSLSKRPLTESPKNKPVQTHISLKKQSYMD
SLGLDTIGESWKKALEPEFHKDYFVKLGKFVTSERSSHTVFPPVEDVFSWTQHCKLKDIK
VVILGQDPYHGEGQAHGLCFSVKKPVKPPPSLENMFKELKSDIGGFKHPGHGDLTRWAKQ
GVLLLNAVLTVRAHSANSHKDKGWEKFTDAVIKYVNSNCTGVVFMLWGSYAQKKGAVIDK
KRHHVLCSVHPSPLSAYRGFLGCKHFSEANKLLKDHGDKEIDWCAL
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcacaaagaaaaatttcgtctttcttcaacgcggcccagaagaagacaggcaac
ttgaaacgaccattgaaagagaaggaaatctgttcattatcaaagagaccgttgactgag
tcacctaaaaacaaaccagtacagacacatatatccttgaagaaacaatcgtatatggat
tctttaggtcttgatacaattggagagtcttggaaaaaagctttagagcctgaatttcat
aaggactattttgttaagttgggcaaatttgtgacatcagaaagatcttcacatacagtg
ttccctccagtggaagatgttttctcttggacacagcattgcaagttgaaagatattaaa
gttgttatactcggccaggatccttaccatggtgaggggcaggcacatggattatgcttc
agtgtcaaaaaacctgtgaaaccccctccttcattggaaaatatgttcaaagaattgaaa
tctgatattggaggtttcaaacaccctggtcatggagatttaactagatgggcaaaacaa
ggtgtcttgcttttgaatgctgtcctgacggtccgtgctcattctgctaattctcacaaa
gataaaggatgggaaaagttcacagatgctgttataaaatatgtcaattccaattgtacc
ggagttgtgtttatgttgtggggatcttacgcccaaaagaaaggtgcagtaatagataag
aaacgacatcacgtattatgttctgtccatccttcaccattgtcagcatacagaggattc
ctcggttgcaaacatttttctgaagcaaacaaacttttaaaagatcatggagataaagaa
attgattggtgtgctttgtaa
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