Styela clava (leathery sea squirt): 120342116
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Entry
120342116 CDS
T07291
Name
(RefSeq) chondroitin sulfate synthase 1-like
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
sclv01100
Metabolic pathways
Module
sclv_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
120342116
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sclv01003
]
120342116
Enzymes [BR:
sclv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
120342116
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
120342116
Glycosyltransferases [BR:
sclv01003
]
Glycan extension
O-Glycan
120342116
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
120342116
NCBI-ProteinID:
XP_039266740
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MARTTQTKKSIFPFCAGLGCGMLLSLMLFFPITSRYLFSHIVKNPNSAFKDGFVHAVRNG
EGKGLDLVRERKDSEYGKDIKDNRTIPLEVDPDPLPIESLDWDINTASQRIPAYLSQELK
FKKKLFIGIVSFSPLTARISKLVPTTWGEAWGRLKPGDMTFYSTLGYDIPKTNGYNYQTL
SGSSKLPDLPSPHMMYQILRDICSQYIDTHHFYYIGNSDTYISTSDLLNFTMQLNETDIM
WIGHGTYRPLKQRYYTNDPDYFCHSGPGFILSRRTMQGLCPHLEVCEALYNRDYERPGYE
LSRCFRRFLNINCTKSNEARSLFYMSDFVPNPFFEARSFSTSITVNPIVDETALYVLHQY
FIERQLNHTTRNNEYYHSIVQRMDRVLVKEGGMPDDRLVLGREGNANKYHHPDIVPWEKI
QKVFKGKPGKSKDIILSTDHSEPSREVIGHDYIALSDVREITMKHVMENHFTDDDKESHI
DTSSVYRKVIPGVGYQYMVDITKDTKKVASVCLNQPYGRVITYGTRTAPNVKITFILPMQ
DGSPKFQEFMQMFEQACMSADQPQNVGLLVVLYGSSKTNTTSDVKELDEKTSSALTLLNT
YKQKYPKLSLRWINSGTSSFSHIKAVEMAVLALSSDTLVCSLHLDNQMSPEYLHHVRLNT
VPHERLFFPVSFQLYKDINRDGDNIMFNKGFWRSFDYSTFCSYKQDIMQACGGDKFTSGE
DLFQKSLTSGLDVFRAPEYALLTKWHDIDCSSQWLDTDERTACSIERKQVNIAVSASRDR
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaacaacacaaacgaagaagagcatttttccattttgtgcaggtttgggatgc
ggaatgcttctttcattgatgttgtttttcccgataacaagtagatatttattctcccac
attgttaaaaatcccaactcagcattcaaagatggtttcgttcatgctgtgagaaatggc
gaagggaaaggtcttgatttggtgagagagaggaaagattcagaatatgggaaggatatt
aaagataatcgaacgattcctcttgaagttgatccagacccattgcctattgagagcttg
gactgggatattaatacagcttcgcagagaattcctgcttatctatctcaagaactcaag
tttaaaaagaaattgtttatagggattgttagtttctctcccctcacagcaagaatttct
aaactggttcctaccacatggggtgaagcatggggaagattgaaacccggtgatatgaca
ttctattcaacattaggatatgatattccaaaaacaaatggatacaattatcaaacatta
tcaggttcatcaaagttaccagaccttccatcacctcatatgatgtaccaaatattgcgg
gatatttgtagtcaatatatagatactcatcatttttattacattggtaacagtgataca
tacatcagtacttctgatctactaaattttactatgcaacttaatgaaacagatataatg
tggataggtcatggtacgtatcgaccacttaaacaaagatattatacaaatgatcctgat
tacttctgtcattccggtcctggatttatattatcgagacgaaccatgcaaggtctctgt
ccacatttagaagtttgtgaggctttatataacagagattatgaaagaccggggtatgaa
ttgtccagatgcttcagaagatttttaaatattaattgcactaaatctaatgaggcgaga
tctcttttctacatgtctgattttgttcccaatccattctttgaggctcgttctttttct
acaagtataactgtaaatccgattgttgacgaaacagcattgtatgttttgcatcaatat
tttattgaaagacaattgaatcatacaacaaggaataatgagtactaccattcaattgta
caaagaatggacagagttttagttaaggaaggtggaatgcctgatgatagattagtgctt
ggaagagaaggcaatgctaacaagtatcaccatccagacattgtaccttgggaaaaaata
caaaaggtattcaaaggaaagccaggaaaatcaaaggacattattttatcaacagatcat
tcagaaccatcccgcgaagtgatcggacatgattatatcgctttgagtgatgtcagagaa
attacaatgaaacatgtcatggaaaatcattttaccgatgatgacaaagaatcacatatt
gataccagcagtgtgtatagaaaagtgatacctggggtgggataccaatacatggtggat
attactaaagatacaaaaaaggttgcatctgtttgtctgaaccagccatatggaagagta
ataacatacggaactcgtacagcacctaatgttaagattacctttatattaccaatgcaa
gatggttcacccaaatttcaagaatttatgcaaatgtttgaacaggcttgtatgtcggcc
gaccaaccacaaaacgttggactcctcgtcgttttatatggatcaagtaaaactaatact
acatctgatgtaaaagaattggatgagaaaacatcaagtgctttgactttactcaataca
tacaaacagaaatatccaaagttatctttaagatggataaattcaggaacaagttctttt
tcacatataaaagcagtggagatggcagtacttgctctttcatctgacacgctagtgtgt
tctctacatttagataatcagatgtctcctgaatacttgcatcatgtcagattgaataca
gttccacatgagagattgttctttccagtttcattccagttatataaagatattaatcgt
gatggggacaacataatgtttaataaaggattttggagatcctttgattacagtaccttc
tgttcttataagcaagatataatgcaagcgtgtggtggtgataagtttaccagtggggag
gatttgtttcagaaatctctcacatctggtcttgacgtatttcgtgctccagaatatgct
ttattaacaaaatggcacgacatagactgcagtagtcagtggttagacactgatgaacgg
acagcatgctcaatagagcgtaaacaagttaatattgcagtaagtgcgtcccgtgacagg
tga
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