Styela clava (leathery sea squirt): 120342193
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Entry
120342193 CDS
T07291
Name
(RefSeq) nuclear pore complex protein Nup50-like
KO
K14295
nuclear pore complex protein Nup50
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120342193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120342193
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120342193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
120342193
NCBI-ProteinID:
XP_039266847
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MSKRVADKYLTDQNWDKEDEVDDDDNSGTFKTADNDVLQTRVIRKAKRRIVGSSQQSTAS
AFSGFGGLKAPTNSTKPSFGGFNLPTSGNGSNVSQMKPFSMFQSTGSSGSAATQPTIQSS
SGDKSSTRTLESKTADSTISKTIEIKSSDDDTTQNSREYNRQLSALNRSVSEWIKNHVEK
NPLCDLTPIFLDYKKYLSEIDDKYGHSDNEGSSQNSFQVSDSQETVSPKSSQNSSLTSSV
SDKPKFSLTGFGSKTEEPKPIEINSKTDAPVSKPLFSGFQTSTTTSSPFKGFNVSKTTAF
PGFSFSSSMVGSGGSTQQASGQGKDEEEYVPPKPESNVVADPEAFYSIRCKLYYKKEGAY
ADKGVGQLYLKPSGDKTQLVIRADTAISQILLNIHLIPAIPVKKQGKNNVLIMCIPNPPI
NEKEKDKVVAFLIRVKTSEDADKLIEIMEEKKREATDKADADR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcgtgtcgctgataaatacttaacagaccaaaattgggacaaggaagatgag
gttgatgatgacgataactctggaacattcaagacagcggataatgatgttttgcaaacc
cgtgttattcgaaaagcaaagcgtaggattgttggtagcagtcaacaatcgacagcctcg
gcattttctggttttggtggattaaaagccccaacaaatagtaccaaaccttcgttcggt
ggtttcaatctaccgacttctggtaatggaagcaatgtttctcaaatgaaaccgttttca
atgtttcaatctactggatccagtggatcagctgcaactcagccaactattcaatcttca
tcaggggataaatcatctactaggacgttagaatccaaaaccgcagatagtacaatttca
aaaactattgaaataaagtcgagtgatgatgatacaacacaaaactcaagagaatacaac
aggcagctcagtgctttgaatcgaagtgttagtgaatggataaagaatcatgtggaaaag
aatccattgtgcgatctcactcctattttcctagattataaaaaatatttatctgaaata
gatgacaagtatggacattcagacaatgaaggttcatcgcaaaattcattccaagtatca
gattcacaagagacagtttctccaaagtcttctcaaaattcttctctaacttcaagcgtt
tctgacaaaccaaagttttctctgactgggtttggtagcaaaacagaagagccaaaacca
attgaaattaactctaaaactgatgctccagtcagtaaaccattattctcgggatttcaa
acttccacaacaacttcttcacctttcaaaggatttaatgtttcaaaaacaactgcattt
ccgggattttcatttagttcatccatggtcggttcaggaggctcaacccagcaagcgtcc
gggcagggtaaagacgaagaggaatatgttccaccaaaacccgaaagtaatgttgttgcg
gatccagaagctttctactctatcaggtgcaaactttactataaaaaggaaggtgcttat
gctgacaagggtgttggacaactttatctaaagccatctggagacaaaacacaattagtc
atcagagctgatactgcaataagtcagatcttgcttaacattcaccttattcctgcgatt
ccagttaaaaagcaaggaaaaaataatgtattgataatgtgtattcctaatcctccaatt
aatgaaaaagaaaaggacaaggttgtggcttttctgattcgagtaaaaacaagtgaagat
gctgataagcttattgagattatggaagaaaagaagcgagaagccacggataaagctgat
gcggataggtga
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