Styela clava (leathery sea squirt): 120342210
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Entry
120342210 CDS
T07291
Name
(RefSeq) vacuolar protein sorting-associated protein 54-like
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sclv01009
]
120342210
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120342210
Protein phosphatases and associated proteins [BR:
sclv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120342210
Membrane trafficking [BR:
sclv04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
120342210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
INTS1_RP2B-bd
ARA70
Motif
Other DBs
NCBI-GeneID:
120342210
NCBI-ProteinID:
XP_039266880
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MAHGGNHANVDKNKRLIARDSKVNLAALLNDPRKARRDYDVFTKTWGESFKDLTHGSTVP
KSSRLPEISEAHFANYLSKTRDKFLRHQSQHVESGIVTNEGNEYGGSKVNAGKASLKTAS
LQQQLKIQAATKLALDSIPRMFLRPTFSLEDPGTFSSVISLNSLSSGHATTRNYVSDFIA
HGMSSSKLLQEKLSHHLDLVEVAIVRQISVQSDAFFDAMASHEDLNEFLRKMLSSVHQLK
LKISAIGETITKKSFKVLHCHCKHRNRVIVLNKLQTMITVHQAQPTIQLLLSTGEYAGAL
DLIETTQEVLKQELAGLHCFRHLSSQLSEIENVIGHMMNEEFSNCITNDLQRPLIEGSVT
SQPHHLTAIALGLIRRKRLVFLDEFREEVKTTVKTIIKTTVVDVVEASEKNNKNLTNGVE
QNGDSPEKTESLAERMRLLEYNEWIELFIAITDNLTIFLRRVKSFLTVVVNAICLSTPPS
KRFNVNNSLANGISTDSDLAVHTAPDELNELEQQTTSPKDTISTDNVWDDMDQYEAQLME
SVNENPREKESKQKLQKTFSQNISDSISTKGTDNSDSYSVTEECDSSSAGSLLNEKEHSD
FMQSICENLIWAADFAHDRCVKVIIAKNKNSSLEKLTSLQFLTLAQSIEKYLTDTENIFL
GEESNGDKDSLYFDGYFMMCCGNYNRGGGVLRGVLQSQASRFVTRFHEERRNKLSLILDN
ETWKQSEVPAQLAKSLQNLSVAASKNEIKVDKLPDDGSAESTKPTALLTIDGDEYAVVGT
VLMLLKMVTEYLKCADDLPASTQDLMTRVCELLTLFNSRTCQLVLGAGALQLAGLKTITT
RNLGLASRCLQLVLNLLPSIRYQFKQKLSLSCPPNSKSKHLSSLKHFDHVSKDYKDHITE
IDNKLVNIMDSAIENNLSRWQVKAPMPSREFRTICRQMTKLHEMIADLLPEKQVENILYN
IHLSFAKQLHRKLQQYGVRNDGGPQCGLVMSDIAFYEVSLKNLKVFNEDLSMNSVWS
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggcacacggtggaaatcatgcaaatgttgacaagaacaaacggctgatagctcgtgat
tctaaagtcaaccttgcagctttactgaacgatcccaggaaggccaggagagattacgat
gttttcacgaaaacttggggagaatcgttcaaagatctcactcatggatccactgtacct
aaatctagtaggttacctgaaatttcggaagcacattttgctaattatctatcaaaaaca
agggataaatttcttagacatcagagtcaacacgttgaaagtggtatcgtaacaaacgag
ggaaatgaatatggtggttcgaaagtaaatgctggaaaagctagtcttaagacagcttca
ttgcaacaacaattgaaaatccaggcagctacaaagttagctcttgattcaattccaaga
atgtttttgaggcctacattttctcttgaagatccagggacattttcttcagtaataagt
ttaaattctttatcatcgggccatgcaacaactagaaactatgtaagtgattttattgct
catggtatgtcatcatcaaaattgttacaagaaaaactaagccatcatttagacttggta
gaagtcgctatcgtgcgtcaaatatctgttcaatcagatgcattttttgatgcaatggca
tcacatgaagacttgaatgaattcttgcgtaaaatgttatcaagtgttcatcaattaaaa
cttaaaattagtgcaatcggtgagactataacaaaaaaatcattcaaagtactacattgt
cattgtaagcacaggaatagagttattgttttgaataaattacaaacaatgataacagta
caccaagcccaacccacaatacaacttctgttatcaaccggtgaatacgcaggagcatta
gacttgatcgaaacgacacaagaagttttgaaacaagaattagctggacttcattgtttt
aggcatttaagttcccaattatcggaaattgaaaatgtgattggccatatgatgaatgaa
gaattttcaaactgtataaccaatgaccttcaaaggcctttaattgagggttctgtaacc
tcacaaccccatcatctcactgcgattgcgcttggattgattagaagaaaacgattagta
ttcttagatgaatttagggaagaagttaaaacaactgtaaaaacaatcataaaaacaacg
gtggtggatgtagttgaagcatcagaaaagaacaacaaaaatctgaccaatggggtcgaa
caaaatggggattcacctgaaaaaactgaatctttggcggaaagaatgcgattgcttgaa
tataatgaatggattgagctgtttattgcaatcactgataatttaactatatttctaaga
cgagtaaaatcttttttgactgtcgtagtcaatgcgatctgcctatcgacaccaccgtct
aaaagatttaatgtgaataattccctcgcgaatggaatttctacagattctgatttggct
gtgcatactgcacctgatgaattgaatgagttggaacaacaaactacctctcctaaagat
actatttctacagataatgtatgggacgatatggaccaatatgaagctcaattgatggag
tctgtaaatgagaatccgagagaaaaagaatctaagcaaaaattacaaaaaacattttca
cagaatatttcagactctatatctactaaaggaactgataattctgactcatattcggta
actgaagaatgtgattcctcttctgcgggttcattgctaaatgaaaaagaacatagcgac
tttatgcaatcaatttgtgaaaatttaatatgggctgcagattttgctcacgaccgttgt
gttaaagtcattattgccaaaaataaaaattcttctttggagaagttaacttctctccag
tttttaacacttgctcaatccattgaaaagtatctcactgacacggaaaacatattttta
ggagaagaaagtaatggtgataaagattctttatattttgatggatatttcatgatgtgt
tgtggaaattataacaggggtggtggagtcttgagaggtgttttgcaatcgcaagcatca
cgctttgtcacaagatttcatgaagaaagaagaaataaattatcacttatacttgataat
gaaacatggaaacaatctgaagtaccggctcaacttgcaaagtcgctgcaaaatctatca
gttgctgcatctaaaaatgaaatcaaagtggataaattacctgatgatggatcagcagaa
agtacgaaacctactgctctgttgaccattgatggagatgaatatgctgttgttgggaca
gtactcatgcttcttaaaatggtgacagaatatttaaaatgtgctgatgatttgcctgcc
tcaacacaagacttaatgacaagggtttgtgaattattaacgctattcaattctcgaact
tgccaacttgtcctaggtgcgggggcgttacagctagctggactgaaaacaataaccact
agaaatttaggtttagcgtcaaggtgccttcaacttgttttaaatctacttccatcaatt
aggtaccaatttaaacaaaaactgtcgctgtcttgtcctccgaatagcaaaagtaaacat
ttaagcagtttgaaacatttcgatcatgtttcaaaagattataaggatcatataacagaa
attgataataaacttgtcaatataatggattctgcaattgaaaataatctttcaagatgg
caggtaaaagcaccaatgccttctcgtgaatttcgaactatatgtcgtcagatgacaaaa
cttcatgaaatgattgcggatttattacctgaaaaacaggtagaaaatattctgtataat
attcacttaagctttgcaaaacagttgcatagaaaactccaacaatatggtgttcgtaat
gacggaggaccacaatgtggtcttgttatgtctgatattgctttttatgaggttagctta
aaaaacttgaaagttttcaatgaagatttatcaatgaattctgtgtggagctga
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