Styela clava (leathery sea squirt): 120342273
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Entry
120342273 CDS
T07291
Name
(RefSeq) nuclear nucleic acid-binding protein C1D-like
KO
K12592
exosome complex protein LRP1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120342273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120342273
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
120342273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sas10_Utp3
Motif
Other DBs
NCBI-GeneID:
120342273
NCBI-ProteinID:
XP_039266975
LinkDB
All DBs
Position
Unknown
AA seq
159 aa
AA seq
DB search
MSSSDGEDIPHELEECFESFSDSLDKVESAIKPLLDTPRNKILQDLTPLDVAKLELVSAY
SINSMFWTYLITQGVNPRTHPIKGELDRIKIYMGKVKEIEDRAKAPKLEKETAKRFIRNA
MFDLDDKNKEKQEKSDSKGAAKRHSKHHDHKSKKRAKKK
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccagtgacggcgaggatattcctcatgaattggaagaatgttttgaaagtttc
agcgattcccttgataaagtggaaagtgctatcaagcctttgttggacacgccgcgtaat
aagatacttcaagaccttacacccttggatgttgcaaaactagaacttgtttcagcatac
tccattaattcaatgttttggacttatctgataactcagggagtcaatcccagaacacat
ccaattaaaggagaattggataggataaagatatacatgggtaaagtgaaagaaatagaa
gaccgagcaaaagctccaaagctagaaaaagaaactgcaaaacgttttataagaaatgcg
atgtttgatctcgatgataaaaataaagaaaaacaggaaaagtcagacagtaaaggtgct
gcaaaaagacactcaaagcatcatgatcacaaatccaaaaagagggcgaaaaagaagtga
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