Styela clava (leathery sea squirt): 120342333
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Entry
120342333 CDS
T07291
Name
(RefSeq) LOW QUALITY PROTEIN: heat shock cognate 71 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03040
Spliceosome
sclv04141
Protein processing in endoplasmic reticulum
sclv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120342333
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120342333
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120342333
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sclv01009
]
120342333
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sclv03041
]
120342333
03009 Ribosome biogenesis [BR:
sclv03009
]
120342333
03110 Chaperones and folding catalysts [BR:
sclv03110
]
120342333
04131 Membrane trafficking [BR:
sclv04131
]
120342333
03051 Proteasome [BR:
sclv03051
]
120342333
03029 Mitochondrial biogenesis [BR:
sclv03029
]
120342333
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sclv04147
]
120342333
Protein phosphatases and associated proteins [BR:
sclv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
120342333
Spliceosome [BR:
sclv03041
]
Complex B
Other components
Prp19 complex
120342333
Complex C
Prp19-CDC5 complex
120342333
Ribosome biogenesis [BR:
sclv03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
120342333
Chaperones and folding catalysts [BR:
sclv03110
]
Heat shock proteins
HSP70 / DNAK
120342333
Membrane trafficking [BR:
sclv04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
120342333
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
120342333
Proteasome [BR:
sclv03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
120342333
Mitochondrial biogenesis [BR:
sclv03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
120342333
Exosome [BR:
sclv04147
]
Exosomal proteins
Proteins found in most exosomes
120342333
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FtsA
DDR
FGGY_C
Motif
Other DBs
NCBI-GeneID:
120342333
NCBI-ProteinID:
XP_039267047
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MPSIGIDLGTSNSCVAVYRNKQIQVVANDQGSRLTPSFVSFTEDERXSNFEDTIFQIKRL
IGRTYDDPMVQADMKTLGYNVINDKNRPIVRVSYKKQVMFFTAEEISAMILESLKQTAED
YLGEPVTDAVITVPAHFNDAQRSATRDAGIIAGLNVLRMINEPTAAALAYGIETNDKQNI
LIFDLGGGTFDVTILNIEDNIFHVRATGGDTHLGGNDFDNRLTEHFIEEFNEANKCDISK
DKRALSRLRVQCEIAKKQLSTSITARLMIDGFYEGKDLKSSITRSQFEQLNLDLFNKTIQ
IVEKTLSDAGMKTTEIDNVVIVGGSTRIPKIQQLLKELFDGKVLSKKINADEAVAYGAGA
LAAKLSFDTQFASDFKEIHLWDVLPLSVGWRSLGDRMNIVLQKNTKIPIIETDVTPVTTK
DNQTKARFYIYEGERACVKDNHFLGSVTIDGIPPKPREKEKFSLCFAVDESGILTVSARN
ISSGKENQVVISNNRARLSAKEIEQMNKQAEKFRKEDEDFKTRNKARNDLEDFVYAIKHS
VDDPDFGDKMSEQYKKLIVEKCTEILNWAKLQGNPEISESEKKKKELKNFCGPIFAKLHG
GKAFLQSLSN
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgccatccataggaattgacctcggcacatctaactcatgcgttgctgtttacaggaat
aaacagatccaagtcgttgccaacgatcaaggaagtcgacttactccgtcttttgtatca
ttcacagaagatgaacgtncatctaattttgaggatacaatattccaaatcaaaaggctg
attggacgaacatacgatgatcccatggtgcaagctgatatgaaaacactaggatataac
gtcatcaatgacaaaaacagaccaatcgtccgtgtgtcatacaagaagcaagtcatgttc
ttcactgccgaagagatcagcgcaatgattcttgaatctcttaagcaaacagcggaagac
tatttgggcgagccagttaccgatgccgttattacagttcctgctcatttcaatgatgca
cagcgtagtgcaacgagagatgcaggaatcatagcgggcttgaatgttttacgaatgatc
aacgaacccactgctgcggctctagcgtacgggatagagaccaatgataaacaaaacatt
ctgatatttgatcttggtggaggaacattcgatgtcacaattttaaatattgaagataat
atattccatgtgagagctacagggggtgacacacatttgggaggaaatgattttgacaat
cgattgacggaacattttatcgaggaattcaacgaagcaaacaaatgcgacatatcgaag
gataaacgtgcgttaagtcggctgcgtgttcaatgtgaaatagctaaaaaacaactttca
acttctataacggcaagactcatgattgatggattttatgaaggcaaggatttgaagagc
agtattacacgatcccagtttgaacaacttaaccttgatttgttcaacaaaacgatccag
attgttgaaaagacactttcggatgcaggaatgaaaactacagagattgacaacgttgtg
attgttggtggatcaacaagaattccaaaaattcagcaacttttgaaggagcttttcgat
ggcaaagtcctgtctaaaaagattaatgctgatgaagccgtagcatatggtgcaggagct
ttggcagctaagctgtcatttgatacacaattcgcgtctgacttcaaagaaatacatctt
tgggacgtgttgccgctgtcagttggttggagaagtcttggggacagaatgaacatagta
ctgcaaaaaaataccaaaatacccatcattgaaacagacgtaacaccggtaacaaccaaa
gataatcagacaaaagctagattttatatttacgaaggggagcgtgcatgcgttaaagat
aatcattttctcggaagtgtcactattgatggcattccaccaaaaccgagagaaaaagag
aaattttcgttatgctttgcagttgatgaaagtggaatactaactgtgagcgctcgtaac
atcagtagtggcaaagaaaatcaagtcgtaatttcaaacaacagagcaagattaagtgca
aaagaaattgaacaaatgaacaagcaagccgaaaaattcagaaaagaggatgaagatttt
aaaacacgaaataaagctcgaaatgatcttgaagattttgtctatgcaatcaagcattca
gtagacgatcccgattttggagacaaaatgtcagagcaatacaaaaagcttatcgttgaa
aaatgtacagaaatattaaactgggccaaactacaaggaaatccggaaattagtgaatcc
gaaaagaagaagaaagaactcaagaatttctgtggaccaatctttgccaagttacacggt
ggaaaagcctttttacagagcctatcaaactga
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integrated database retrieval system
