Styela clava (leathery sea squirt): 120342454
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Entry
120342454 CDS
T07291
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03030
DNA replication
sclv03410
Base excision repair
sclv03420
Nucleotide excision repair
sclv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120342454
03410 Base excision repair
120342454
03420 Nucleotide excision repair
120342454
03430 Mismatch repair
120342454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sclv03032
]
120342454
03036 Chromosome and associated proteins [BR:
sclv03036
]
120342454
03400 DNA repair and recombination proteins [BR:
sclv03400
]
120342454
DNA replication proteins [BR:
sclv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120342454
DNA Replication Termination Factors
ELG1-RFC complex
120342454
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
120342454
DNA repair and recombination proteins [BR:
sclv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120342454
Check point factors
HRAD17(Rad24)-RFC complex
120342454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_22
AAA_24
AAA_11
AAA_16
AAA_assoc_2
Mg_chelatase
bpMoxR
RuvB_N
AAA_14
DUF815
TIP49_C
AAA_5
AAA_19
ResIII
AAA_7
MCM
AAA_30
AAA_23
AAA_28
SLFN-g3_helicase
AAA_2
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
120342454
NCBI-ProteinID:
XP_039267217
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MHSFFKPASGSGDGKKSSLTKSDNETENLKPWIEKYRPKCVDDIAHQDEVVAVLKKCITG
ADLPNMLFYGPPGTGKTSTILALSRDLYGPKFRDRVLELNASDDRGISVVRDKIKNFAQL
SVSSLQGGKSPXFKIIILDEADSMTKAAQQALRRTMEKQTKTTRFCLICNYVTRIIAPIT
SRCSKFRFKPLSEEDQKKRLLRVAETESVKISEDAMDSMVKCSEGDLRKAMTFLQTAHRL
KVDEGIAIEDVLEITGVIPDPVIKSFLNSCSSNSYENLLKTVQEISADGHAAAQLVSQLH
DEIVIMPSLTDEQKCAITEKLATLDYCLNDGADEYLQLMSLGTLIQQQICS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcattcattttttaaaccagccagtggatctggagatggaaagaaatcatccctaact
aagtctgataatgaaacagaaaacttgaaaccatggattgaaaaatacagaccaaaatgt
gttgatgatattgcgcatcaggacgaagtcgttgcagttttaaaaaaatgtattacagga
gcagacttgcccaatatgttgttctatggtcccccaggaaccggtaaaacatcaaccatt
ctggccctttcacgagatttgtatggccccaaatttcgggatagagtacttgaactcaat
gcatcagatgacagaggcatatcagtggtgagagacaagataaaaaattttgcacagttg
tctgtaagcagtttacaaggcggaaagtcgcctncgttcaagataatcatattagatgag
gcagactctatgacgaaagctgcacaacaagctttgagaaggacgatggagaagcaaacg
aaaactacaagattttgccttatttgtaattatgtcacaagaatcattgcaccgattaca
tcaagatgttcaaaatttcgattcaaacctttgtctgaagaggatcagaaaaaaaggtta
ctcagagtagcagaaacagaatccgttaaaatatcagaagatgcgatggatagtatggta
aaatgttcagagggggatttgcgaaaagcaatgacatttttacaaactgcacatagactt
aaagtagacgaaggcatagcaatcgaagatgttctcgagataacaggtgtaataccagat
ccagtaatcaaatcatttctcaatagttgttcttcaaattcatacgaaaatctcctaaaa
acagtgcaagagatatcagctgatggccatgccgcggctcaattggtctcacagctccat
gatgaaattgttattatgccatctctcactgatgagcaaaaatgtgccataactgaaaaa
ttagcaaccctcgattattgtctcaatgatggtgcggatgaatacctccaacttatgtca
cttggaactcttattcagcaacaaatttgctcatga
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integrated database retrieval system
