Styela clava (leathery sea squirt): 120342573
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Entry
120342573 CDS
T07291
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120342573
Membrane trafficking [BR:
sclv04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
120342573
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
Ig_3
I-set
ig
Ig_2
LRR_EndoS
LRR_9
V-set
LRR_Zer-1
LRR_NXF1-5
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
120342573
NCBI-ProteinID:
XP_039267389
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MEYELLLVSLLVLFFGLTTTSGCIVERENSCTCDPTMRQVSCTRLGDSVDDVLPHLIPDE
TWQLVMKRVWVDDAVELRPHNFVTLKQLRWLDFSYNRISVIHPETFSDMRSLYFVNLSHN
RLRLLESNAFNGNLPDLLSLDLSYNRLLLLTDRNFKAVKNLKFLDLRNNPILFISGEAFW
GLSQLERLKLSSANFTKFPAEPLSSLLNLRMLEMRDMPFIKSIPDHAFSFNSRLESLVLE
KLPLSVGGLSVDVFYGLESLRHMTIASCNLTSVPCTSLSKVKHSLESLDLSRNSIQIIYP
DDLSGLSDLKNLTLHDTHLQEIKPGSFIKLEKLEALDLSNNRLRTLYHDSFPENLTQLQE
IRLTNNVWSCDCSLKWLTESHISLGHDHVTCTDPRSERGKSLKEMRKKLPDTFYKCKSPI
ITTKEYSEERYVEGDQALLYCDAIGEPLSFSWYFAGTVIPVRGSDLRKNGKELTIRNVQL
NDAGEYTCIIRNAGGQKSITVLLHVDAAKHGDMSSNLPPGRGNDGSVKDSGKDCSTGTQN
IRREFSRKPGFSSENSFDKSNIATTAILITILGCVTTLGVAGVFLFVGCVWSKRRDAAGQ
NSRNTQNSAPSVNVNGHCKHEQSKNASKKTMKSIELTDERVVFGGHGIYSKPIQDLDCPK
IDRQSNINRKK
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggaatacgagttattgttagtctccttattggtgttattctttggacttacaacaacg
tctggatgtatcgttgaacgggaaaattcttgtacctgcgaccctacaatgcgacaggtg
tcatgtacacggttgggagactctgtggatgatgtgttgccacatttaatacctgacgaa
acttggcaattggtgatgaaacgcgtgtgggtagatgatgcggttgaacttcgacctcac
aattttgtgacgctgaaacaattaagatggttggacttttcgtacaatcggatttcagtg
atacatcccgaaacattcagtgacatgaggagtctatacttcgtgaatttatctcacaat
cgtttgaggctgctggaatcgaatgcattcaatggaaatttaccggatttattgtcctta
gatctttcttataatcgattgttactgctgacggaccgcaatttcaaggctgtaaagaat
ctgaaattcttagatctcagaaacaatccaattttgttcatatcaggagaggcattctgg
ggactttcacagttggaacgtttgaaattatcgtctgcaaatttcaccaaatttccggca
gaaccattgagttctttattaaacctgagaatgctggaaatgcgtgatatgcctttcata
aaatccattccagatcatgcattcagtttcaacagccgactggaaagtcttgttcttgag
aaattgccattgtcagttggtggcctctcagtcgatgttttttacgggttggaaagttta
cggcacatgactattgcgtcttgcaacctgacttcggtgccatgtacgtcattgtcaaag
gtgaaacatagtctggaaagtttggacctttcgagaaattcaattcagatcatatatccg
gatgatttatcaggtctctcggatttaaaaaatttgactctgcacgacacgcatttgcaa
gagataaaaccgggatcatttatcaaattagaaaaacttgaagctttagacttatccaac
aacaggttgagaaccttgtaccatgattcatttccggagaatttaacccaactgcaggag
atacgtttgactaataatgtttggtcatgtgattgtagtctgaagtggttaacagagtct
cacattagtttgggacatgatcacgtaacctgcactgaccccaggagcgaaagggggaag
agtcttaaggaaatgagaaagaaacttcctgataccttctataaatgtaaatcacctata
attaccacaaaagaatacagcgaagagagatacgtcgagggcgatcaggcactgttatat
tgtgatgctattggggaacctttgtcattttcttggtactttgcaggtacagtcatacca
gttcgtggaagtgatttacgaaaaaatggaaaagaacttactatacgcaacgttcaactt
aatgacgcgggagaatatacttgcattatacgaaatgctggaggacaaaagtcgataact
gtactcttgcatgtagatgcagccaagcacggagacatgagcagcaatttgcctcctggt
cgtggtaatgacggaagcgttaaagattccggtaaagactgttcaactggcacgcaaaat
attcgacgtgaattcagtagaaaacctggtttttcctctgaaaattctttcgacaaatcg
aatatcgccacaacagcgatactgatcacaattttaggctgtgtcacaacactaggagtc
gctggtgtttttttgtttgttggatgcgtgtggagtaaaagacgagatgctgctggtcaa
aattcacgaaacacgcaaaactctgctccgtcagtaaacgtaaacggtcattgcaaacac
gaacaatcaaaaaatgcaagcaaaaagaccatgaaatcaattgaacttacagatgagcgt
gtagtgtttggaggtcatggtatttactccaaaccgatacaagacttggactgcccgaaa
atagataggcagtcaaatatcaacagaaaaaaataa
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