Styela clava (leathery sea squirt): 120342590
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Entry
120342590 CDS
T07291
Name
(RefSeq) integrin alpha-V-like isoform X1
KO
K06584
integrin alpha 8
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04512
ECM-receptor interaction
sclv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120342590
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120342590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sclv04515
]
120342590
Cell adhesion molecules [BR:
sclv04515
]
Integrins
Integrin alpha subunits
120342590
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_3
Integrin_A_Ig_2
SAP130_C
Motif
Other DBs
NCBI-GeneID:
120342590
NCBI-ProteinID:
XP_039267428
LinkDB
All DBs
Position
Unknown
AA seq
903 aa
AA seq
DB search
MRYQRISPSSFGIQLQYFGYSIASVDDANFSKNPIIIASSPKSQQIAVIKARPVIELLVD
LTINSQHGSSIDVIQCAKDQTNKIPCGKAVVCFQVNWKNVGQQTNNGIVDLSFDITLDSD
FKELSEKRMVFERNETSFVIAESNHPSQTRKTCNEYKIILQPNILIAVDTVDFSQQMHAT
LTTKLSERVQREIMSPVMAVEQITVKKEMLLTKGCTTNGSCLYDLSLSADIPEDDPFLIN
DASEVMDINITVVNNGDSAFFTKLQVDMWNIVIVHVKSECAFLETDRQTISYRDKIFGSL
HMTGQSCQLGIRFSVIPLAKFANETEMKINITAFSLLSKDTKAKDVTPSNNIIVINKNVV
YRSSFTVNGLSIPDAMQYWRNITNMTSASSLSQKGVFAGEDGNIENSYKIRNTGPFTVTT
TNMTFTWPAFTATENLPLLYLYSFTCKPESLCTCSRSDQCDFINPHKHPYNNLTVQELHN
VTHCPAKRNFTIYSSEFNITQPESFYVIKNDMMCDKPNSIFKCNEISCHVNNIKPNQVVE
INGRFKFWIPTFRFKENDEDTKVYIGSSLTFNPTKSPVFPSTIYKESAITTTQQYLKTRV
TPKPPEQKVNLVTVLIAMFVGLAIVGLCTLICWKCGFFESRYKDMKEAVLEEEEEELFMS
LASDTQKQSKKNGKEKQERGESSIKVRFMGKRGDGDASSVIDAAEEFVRATSSPSSAKKL
SIPKDDLYLEMTPMRNYRAQKRVFQANVNDMLDTEPTPQGTPSPRKLRKVMWSFKEPSRS
TYPRVTPKGGRTPDNEDSYEVFSPQFDATAHAIVPAINLDAGEVTVRRSATTKPVARSSS
HKAFEKQSEANYTRFDNDENVATAFPFPDYSYICKEEEDGGKMRKTTMTIKDQKKQRVDS
TRF
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgagatatcagcgaatcagcccatcatcgtttggaatccagcttcaatacttcggttat
tccattgcctctgttgacgacgctaacttcagcaagaacccgatcattatagcaagttct
ccaaaatctcaacagattgctgtaatcaaagctaggccagtaattgaattgttggtcgac
ttgaccatcaattctcaacatggttcctcaattgacgtcatacaatgcgccaaagaccag
acaaacaagataccttgcggaaaagcggttgtttgttttcaagttaactggaaaaacgtg
ggccaacagacgaacaacggaattgttgatctatcattcgatattacgttggatagcgac
tttaaagagttatcggaaaaacgtatggtttttgagagaaacgaaacaagctttgtgatt
gctgaaagcaaccatcctagtcaaacaagaaaaacatgtaatgaatacaaaataatactt
caacctaatattctaattgctgtggacaccgttgatttcagtcaacagatgcatgcaact
ttgactactaaactttctgaacgtgttcaaagggaaattatgtctccggttatggctgtt
gagcaaatcactgtcaagaaggaaatgctattgaccaaaggatgtacaactaatggaagc
tgtttatatgatctttcattgagtgcagatattccagaagatgatccgttcctaataaat
gatgcaagtgaagtgatggacatcaacattacagttgtaaacaatggagattctgcattt
ttcacaaagttgcaagttgatatgtggaatatcgttattgtgcatgtcaaaagcgaatgt
gcatttttggaaactgatcggcaaactatttcatacagggataaaatattcggatccctt
catatgactggacaatcgtgtcaacttggaatcagattcagcgtcataccactcgcaaaa
tttgctaatgaaacagaaatgaagataaacattacggcattctctctattaagtaaggat
acaaaagctaaagacgttacaccatcaaacaacatcatagtgataaataaaaacgtcgtt
tacaggagttcgtttaccgtgaatggactatctatcccggatgctatgcagtactggaga
aacatcaccaacatgacatcggcatcttcattgtcacaaaaaggagtttttgctggtgaa
gatgggaacattgaaaattcatataagatacggaataccggacctttcactgttacgact
actaacatgacctttacatggcctgcatttacagcaactgaaaacttacccctgctatat
ctgtactcttttacatgcaagcctgaatctttgtgcacctgcagtcggagcgaccaatgc
gatttcataaatccacataaacatccctacaataacttgactgtacaggaattacataac
gtcactcattgtccagcgaagcggaacttcactatttacagttcagagttcaatattaca
caaccggaaagcttttacgtaataaagaatgacatgatgtgtgataaacccaatagcatt
ttcaaatgcaacgaaatatcttgtcacgtgaacaacatcaagcctaatcaagttgttgag
attaatggcagattcaaattctggattccgacgttcaggttcaaagagaacgacgaagac
accaaagtatacattggaagcagcctcacatttaacccgaccaagtcacctgtttttccc
tcgacgatttacaaagagtcggcaataactacgactcaacaatacctgaaaactagagtt
acacctaaaccaccggagcaaaaagtgaacttggtgacagttctgatagcaatgtttgtt
ggtttagctattgttggactatgtactttgatttgttggaaatgtgggtttttcgaaagt
cgttacaaagacatgaaagaagctgttctggaggaagaagaagaagaattgttcatgagt
ttagcttctgatacacaaaaacaatctaaaaagaatggaaaagagaaacaggaacgagga
gaaagttccataaaagttagatttatggggaaaagaggagatggggatgcttcgtccgtt
atagacgctgctgaagaatttgtgcgtgccacgtcttcgccatcttccgcgaagaagctc
tccatacctaaagacgatctttatcttgaaatgacaccaatgcgaaattacagagcacag
aaaagggtgtttcaagcaaacgtaaacgatatgctggatactgaacctaccccacaaggt
acgccgtcacctagaaagttgcgaaaagtcatgtggtcatttaaagaaccatctcgttct
acttacccccgcgtgactcccaaaggagggcgaaccccggataacgaagatagttatgaa
gttttttcgccgcagtttgatgcaaccgctcatgcaatagtaccagctatcaacttagat
gccggagaagtgacggtacggcgatctgcgacaaccaaacccgttgccagatcgtcttct
cataaagcttttgaaaaacaaagcgaagcgaattacactaggtttgataacgatgaaaat
gtggcaacggcatttccatttccagattattcctacatttgtaaagaagaagaagatggt
ggaaaaatgaggaagacaaccatgacgataaaggatcagaaaaaacaaagagtagattct
accaggttttga
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