Styela clava (leathery sea squirt): 120342629
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Entry
120342629 CDS
T07291
Name
(RefSeq) homeobox protein Hox-A2b-like isoform X1
KO
K09304
homeobox protein HoxA/B/C/D4
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120342629
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
120342629
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
120342629
NCBI-ProteinID:
XP_039267475
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MAALHDEVTVTSHSKPFPVEMNVTAVVTANSNNDVSDNLTSLQTRGSPESAANNNNYLQG
MQNMMPAHEDYLGTSRLNSSSNDFFQARESDFPSVGNHLVKSEFGVSHTGNDVAPEMLYR
DVPNGTSPHGSNERVSKGKGKESPPTVYPWMKRIHVSHVFNGAVEPGKRPRTAYTRHQVL
ELEKEFHFNRYLTRRRRIEIAHSLCLTERQVKIWFQNRRMKWKKDNKLPNTKTRVMHGSS
TSMNMQGSMFDQAVSPPLSSSSNEALPMHSHSPMNLLPSTANHSPDQRTLTYDGRTGLPN
RSHTEEGYFGGYNSNHSQYDMQRHSFVNSTADRMLNGSPGFFHPHPTNMSDFSMMKPDDG
AAAMMGAKMDALGRRYEPHFGVAQKPYDSFQPIVDTNGGLAGPAEYGRISTSSATSAFHL
SHGSVNSTQHHPVSSLDVSINEAQLKLMQFVSTPTSVHHHRPTYMSSFSCPVGSADRFPD
PGYNLYNSLNMKRNALNRPGQENAALRSPMLSDTPANSNDIDYNIRAKEHFIASTNSRNT
NANNNRRNLQYQANVWISKTKL
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgttacatgatgaagttactgttaccagtcactcaaaaccgtttccagtagaa
atgaacgttaccgcagtggttaccgctaatagtaacaacgatgtgagtgacaacttgact
tctctgcaaacacggggctctcccgaatctgcggccaacaataacaactatttgcagggc
atgcagaacatgatgcctgcgcacgaagattatttgggaacgtcgaggctaaattcgtct
tccaacgatttctttcaagcgagagaaagcgattttccaagcgttggtaaccatttagtg
aagagtgagttcggagtgtcgcacacgggcaatgatgtagctcctgaaatgttgtatcgc
gatgtcccaaacggtacatccccgcatgggagtaatgaaagagtgtcaaaggggaaaggc
aaagaatctccaccgactgtttatccgtggatgaagagaattcatgtcagtcatgttttc
aatggagcagtggaaccgggtaaaagaccgaggactgcttataccagacaccaagtattg
gagttggaaaaagagtttcattttaatcgttacctgacaagacgaagacgaatagaaata
gctcattccctgtgcctcacagaacgacaggtaaaaatctggttccaaaatcgaagaatg
aaatggaaaaaggacaacaaattacccaacacaaagactagagtgatgcatggaagcagt
acaagtatgaatatgcaaggcagtatgtttgatcaagcggtctcaccaccattatcttca
tcgagcaatgaagctcttcctatgcattctcactcgccaatgaatctacttccatcaaca
gcaaatcactcaccagatcagaggacattgacttatgacggacgaacaggtctccctaat
cgttctcacacagaggaaggatattttggtggctataactcaaaccactctcagtatgac
atgcaacgtcacagctttgttaactctacagcagacagaatgttgaatggatctccaggg
tttttccatcctcacccgaccaatatgtcagatttcagcatgatgaaaccagatgatggc
gctgctgcaatgatgggtgcaaaaatggacgctttgggtagaaggtacgagccccacttc
ggtgttgcacagaagccttatgactctttccaaccaatcgtcgacaccaacggtgggctg
gccggaccagctgaatatgggaggatttccacttcgtcagccacctctgccttccactta
tcacatgggtcagtcaattccactcaacaccatcccgtatcatctctcgacgtttcaata
aacgaagcgcaactaaaattgatgcaatttgtgagtacgcctacatcagtacatcatcac
agaccgacatacatgtcatcgttttcatgtccggtgggaagtgctgatcgatttcctgat
ccagggtacaatctttataacagtctcaacatgaaacggaacgctctcaacaggccggga
caagaaaacgcagcactgcgttcacctatgttgtcagacacacctgctaactctaatgac
attgactacaacattagggcaaaagagcatttcattgcttcaacaaattcgcgaaataca
aacgctaacaacaatcgcagaaacttgcaatatcaagctaacgtttggataagcaagaca
aaattataa
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