Styela clava (leathery sea squirt): 120342657
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Entry
120342657 CDS
T07291
Name
(RefSeq) ATP-dependent translocase ABCB1-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120342657
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sclv02000
]
120342657
04147 Exosome [BR:
sclv04147
]
120342657
04090 CD molecules [BR:
sclv04090
]
120342657
Enzymes [BR:
sclv01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
120342657
Transporters [BR:
sclv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120342657
Exosome [BR:
sclv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120342657
CD molecules [BR:
sclv04090
]
Proteins
120342657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
Zeta_toxin
AAA_29
AAA_16
HUTI_composite_bact
RecA_C
DUF2768
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
120342657
NCBI-ProteinID:
XP_039267518
LinkDB
All DBs
Position
Unknown
AA seq
1307 aa
AA seq
DB search
MGEPTQLEVLNNKDLDVKIQTPSRDGSESSNSEKKKKEPVPSVPYYQLYRFAYGLDYLLV
IIGFLAAAIHGSCLPLLFVFFGDLTNSFTEFGKYAACNFTYQKCIDAGLYNGTETQFDVD
SANAQDLTGNSLVYVYYFVYIACGVFVCATLQVSTFCYQAVRQSKRIRVAYVRAILRQDI
GYHDVTSSGELNARLADDVKKIQDGMADKVSLMIQYVCMVLAGLVIAFIYSWKLSLVALS
VSPFLIISSALIFTLTNKYTKMELDAYASAGSIAEETISSIRTVVAFGIQEEQANRYSDN
LGEAKAMGLKKGVISGTSLGFLYLTMFGMYALTFWYGVRLVIDENDPLSPGDMMVVFFNI
LIAAFGLGTSGSNMEYFSGAMAAGQKVFAVIDRIPPIDIFSKKGLKPKEASGEIEFKNVR
FSYPSRAEVEVLKGVSFTVEKGQTVALVGQSGCGKSTSVSLIQRFYDIPEGVVLVDGNDV
KDLNVRWLRDRIGVVAQEPILFDTTIGENIRWGREGVTEDEIIKAAKQANAFDFINVLPK
KFDTLVGESGGQMSGGQKQRIAIARAIVRDPKIMLLDEATSALDTESESIVQQALDKAAA
GRTTIVIAHRLSTIKNADKIVAFQEGEIAEIGTHDELLQNPDGVYSNLVNMQVVNTNKNP
STPVPEKDSESQFSSQTSLKRKTSHKFKRQTSTTRSVTSSHNEFGGNKDDDESEDEEEED
LPDAPFTRIMQMNKPEGCYIGFGCLFAAMAGAVDPINAILFASVLTIFTEGDIEEQRRLS
VLYSCLFLALGVIAFISYTMEATLFSKSGMELTTRLRKLAFKSMVRQDIAYFDDHKHSTG
ALCSRLATDASRVQGCTGVRMGTMLKNFCSLGVALGIAFAYGWKLTLLTIGFIPFLALGG
FLEMTLLMGQADKEKQIYEDASKIATEAVNNIRTVASLTKEEKVFQIYNERLKEPAKNAN
KKALITGLGYGFSQCVIYFAYAGVFRLGIYLVEIGDMEFEDVFKVLTAVIFGAMAVGQNS
SFAPDYAEAKVSASRMFKLFDSKPTIDAYSDEGHKPQACKGNVEFKSVKFTYPTRPDTLV
LKGLDVSVPSGSTLALVGQSGCGKSTCIQLIERFYDVLEGNVTVDGSDIKTLNVAWMRQQ
MGIVSQEPVLFNISIKENILLGDKTRPYTDEEVSSAAAGANIHEFISGLPEGYDTKAGAK
GGQLSGGQKQRIAIARALLRKPTILLLDEATSALDTESEKIVQEALDKAREGRTSIIIAH
RLSTVKNADIIAVVDNGKIVETGTHEELIKKRGAYYSLVNAQLTHQE
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgggagagcccacgcaactcgaagttttaaacaacaaggatctggacgtcaagatccag
actccttcgcgtgatggcagcgaatcttcgaattccgaaaaaaagaaaaaggaacctgtt
ccaagtgtgccttattaccaactgtaccgattcgcttatggacttgattacttattggtg
attatcggatttctggcagcagcaattcatggttcttgtctaccgttgctatttgtcttc
ttcggggatcttaccaatagttttaccgagtttggtaaatatgctgcctgcaacttcacg
tatcaaaaatgcattgatgccggcttgtacaacgggacagaaacccagtttgatgtagac
agtgccaatgctcaggatctgactggaaattcgctggtatatgtctactacttcgtctac
atagcgtgcggggtatttgtttgtgcaaccttgcaagtgagcacattctgctatcaagca
gtacgacaatccaagcgtatccgcgtagcttatgttcgagcaattcttcgacaagacatt
ggatatcatgacgtgacttcttctggagaattgaatgcaagactggccgatgacgtcaaa
aagattcaagacggcatggctgacaaagtatcattaatgattcaatacgtatgcatggtg
ttggctggcctcgttattgcattcatttattcttggaaactatctctagttgctctctct
gtatcgccttttttgatcatatcttcagcattgatattcacgttgaccaacaaatatact
aagatggaactcgatgcatacgcaagcgctggttcaatcgccgaagaaacgatatcgtcc
atccgtacagttgtggcatttgggattcaagaagagcaagctaaccggtatagtgacaat
cttggagaggccaaagcaatgggacttaaaaaaggcgtgatttccggcacaagtctcggt
ttcctatatttgacaatgtttggaatgtatgctctaactttctggtatggagttagattg
gtcatcgatgaaaacgacccactctcccccggtgatatgatggtcgtcttcttcaatatc
cttattgccgcttttggcctgggaacatccggaagcaacatggaatacttttctggtgcc
atggctgctgggcaaaaggtttttgccgtgattgatcgaatacccccaatcgatatattt
tcgaaaaaaggactaaaacccaaagaagcgagcggagaaattgaattcaagaatgtgcga
ttcagttatccttctcgtgcggaagtggaggttttgaaaggagtaagtttcactgtggaa
aaaggtcaaacggttgcattggtgggacagagcggttgtggtaaaagtacatccgtcagt
ctaatccagagattttatgatattccggagggtgttgttttggtagacgggaatgatgtg
aaagatttgaatgtgagatggttaagggatagaataggagttgtggcacaagaacctata
ctttttgacaccacgatcggggaaaatataagatggggaagagaaggagtaactgaggat
gaaattataaaagctgcaaagcaagctaatgccttcgattttatcaacgttcttcctaag
aaatttgacaccttagtcggtgaaagcggtggccaaatgagcggcggacaaaaacaacgt
attgctattgcgagagcgatagttcgcgaccccaagatcatgttgctcgatgaagctact
tcagcattggatactgaaagcgaatccatcgtccaacaagcacttgacaaagcagccgca
ggtcgaacaaccatcgtgatcgctcacagactttccaccattaaaaatgccgataaaatc
gttgctttccaagaaggtgaaattgctgaaattggaactcatgatgaattgcttcaaaat
cctgatggcgtttattcaaacttggtcaacatgcaggtggtcaatactaacaagaatccc
tccacacctgtgccggagaaagatagtgaatctcagttttcctctcagacatcactcaag
agaaagacttctcataaattcaaacgtcaaacttcaactactcgatctgtaacctcttct
cataatgagtttggtggaaacaaagatgatgatgaaagtgaggatgaagaagaagaggat
ttgccagatgctccattcactagaatcatgcaaatgaataaacctgaaggatgttatatt
ggatttggttgtctctttgctgcaatggctggtgctgtggatcccattaatgcaattttg
tttgcttctgttctgactatattcacagaaggtgatattgaggaacaaagacgcttatct
gttttatactcctgtttgtttcttgctcttggagttattgctttcatttcttatacaatg
gaggcaaccttgttttctaaatctggaatggaattgacgacacgtctacgaaaactggca
tttaaatctatggttcgacaggatattgcctattttgatgatcataagcatagtactggt
gctctgtgttcgagacttgcaactgacgcatcaagagtgcaaggatgtactggtgtgaga
atgggaacaatgctcaagaacttttgctcattgggtgttgcccttggaattgcctttgca
tatggatggaaattgactttactaacaatcggattcataccttttctggcacttggcgga
tttttagaaatgactttgcttatgggtcaagcagataaggagaaacaaatatatgaggat
gcaagcaaaattgcaactgaagctgtgaataatattcgtactgttgcttctttgacaaaa
gaagaaaaggtttttcagatttacaatgaaagactgaaggaacctgcaaagaatgcaaat
aaaaaagctctcatcactggtcttggctatggtttctcgcaatgtgtcatttactttgca
tatgcaggagtatttcgccttggaatatatttggttgaaattggagacatggaattcgaa
gatgttttcaaggtccttactgctgttatatttggggctatggctgttggacagaacagt
tcatttgcaccagattatgctgaagcgaaggtatcggcatccaggatgtttaaattattt
gattccaaacctactattgatgcgtacagtgatgaaggacacaaaccacaagcttgcaaa
ggcaacgtagaattcaaatctgtgaaattcacatatcctaccagaccagatacacttgtg
ttgaaaggtcttgatgtcagtgtaccatctggtagtacactcgctttagttggccaatca
ggatgtggaaaatctacatgtattcaactcattgaaagattttatgatgtcttagaaggc
aatgtgacggttgatggttctgatataaaaacattgaatgtggcatggatgagacaacaa
atgggaattgtttcacaagaacctgtcttgttcaatataagcatcaaagaaaatatctta
cttggtgacaaaacaagaccatacactgatgaagaagtatcctctgctgccgctggtgca
aatattcatgaatttatatccggtcttcctgagggttacgatacgaaagcaggggcaaaa
ggtggccaactgtctggtggtcagaaacaaagaattgctattgcaagagctttgttgaga
aaaccaactatattattattggatgaagcaacatctgcattggatacagaaagtgaaaag
attgtacaagaagcattagacaaagcaagagaaggtcgtacaagtatcataatagcacac
agattgtcaactgttaaaaatgcagatattatcgcagttgttgacaatggtaaaattgtt
gaaacaggaacacacgaagaacttataaagaaacgaggcgcatactacagtttggtcaat
gctcaactcacacatcaagaataa
DBGET
integrated database retrieval system
