Styela clava (leathery sea squirt): 120342826 Help Entry 120342826         CDS       T07291                                  Name (RefSeq) THO complex subunit 3-like   KO K12880   THO complex subunit 3 Organism sclv  Styela clava (leathery sea squirt) Pathway sclv03013   Nucleocytoplasmic transport sclv03040   Spliceosome Brite KEGG Orthology (KO) [BR:sclv00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     120342826   09122 Translation    03013 Nucleocytoplasmic transport     120342826  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sclv03019]     120342826    03041 Spliceosome [BR:sclv03041]     120342826 Messenger RNA biogenesis [BR:sclv03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      120342826 Spliceosome [BR:sclv03041]  Complex C   Other components    EJC/TREX     120342826  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     120342826 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 ANAPC4_WD40 EIF3I Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_TEP1_2nd eIF2A Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_2nd WD40_RFWD3 WDR90_beta-prop_4th NBCH_WD40 RMC1_N WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_EIPR1 B-prop_COPA_B_2nd Beta-prop_ELP1_1st Beta-prop_NUP159_NUP214 Cytochrom_D1 Beta-prop_DCAF12 Me-amine-dh_H Beta-prop_WDR11_1st PD40 JLPA Motif Other DBs NCBI-GeneID:  120342826 NCBI-ProteinID:  XP_039267752 LinkDB All DBs Position Unknown AA seq 324 aa AA seqDB search MDFTKKMHQYFKLHDRQKEYGAHTSKVHSVAWNCDGRRLASGSFDQTASVFTLDKDRLSR DQSYKGHTDSVDQLCWHPSHPDLFATASGDKTVRIWDARSGKCSITMQTKGENINICWSP NGQTIAVGNKEDLVTFFDTKTWKVKAYEQFKVEVNEISWNNSNDLFFLTTGLGTVNILSY PDLKLIQSLSGHTANCICIEFDPTGRYFATGSADALVNLWDVTELVCVQTFSRLDWPVRT LSFSHDGKLIASASEDHFIDISSVATGENVCEVKCESPTFTVAWHPKQLLLAFACDDKDK YKHDRDAGTIKLFGLSSESTSDKK NT seq 975 nt NT seq  +upstreamnt  +downstreamnt atggatttcacgaagaaaatgcaccaatattttaaattacacgatcgacaaaaagaatat ggtgctcatacatcgaaagtccattctgttgcttggaactgtgacggaagaaggcttgct tctggatctttcgatcaaactgccagtgtttttactctggataaagacaggctgtccaga gatcaatcatacaaagggcacacagacagtgtagatcagctttgttggcatccaagccat ccagatttatttgcaactgcttccggtgataaaacagtaagaatatgggacgcaagaagt gggaaatgctcaataacgatgcaaacaaaaggtgaaaacataaacatatgctggagtccc aatgggcaaacaatcgcagttggaaataaagaagatttggtgacattttttgatacaaaa acatggaaagtaaaggcatatgagcagtttaaagttgaagtgaatgaaatttcttggaat aattccaatgatctattttttctgacgacaggattaggtactgttaatatactaagttat ccggacctaaagctgattcaatcgcttagtggacatacagccaactgtatatgcattgag tttgaccctacaggtcgctattttgcaacaggcagtgctgatgcattagtaaatttatgg gatgtaacagaacttgtttgtgtgcagacattttcaaggcttgactggcctgttcgaaca ttgagtttcagtcatgatggcaaacttatagcttcggcatctgaagatcatttcattgat atttcgagcgtagcaaccggtgaaaatgtttgtgaggtcaaatgtgaatcaccaacattc accgtagcgtggcatcctaagcaactcttactcgcattcgcatgtgatgataaagacaag tataaacatgatagagatgccggaacaattaaattatttggtctctcgagcgagtccacc agtgacaaaaagtaa

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