KEGG   Styela clava (leathery sea squirt): 120342917
Entry
120342917         CDS       T07291                                 
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
sclv  Styela clava (leathery sea squirt)
Pathway
sclv03082  ATP-dependent chromatin remodeling
sclv03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:sclv00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120342917
   03083 Polycomb repressive complex
    120342917
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sclv03036]
    120342917
Chromosome and associated proteins [BR:sclv03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     120342917
  Histone modification proteins
   HAT complexes
    HATB complex
     120342917
   HDAC complexes
    Sin3A-HDAC complex
     120342917
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     120342917
    PRC2.2
     120342917
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     120342917
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    120342917
  Chromatin remodeling factors
   NuRD complex
    120342917
   NuRF complex
    120342917
   NuRF complex (fruit fly)
    120342917
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WDR55 WD40_WDHD1_1st Beta-prop_WDR75_1st EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 Beta-prop_WDR19_1st WD40_RFWD3 WD40_MABP1-WDR62_1st eIF2A TAF1C_beta-prop ANAPC4_WD40 NBCH_WD40 Beta-prop_RIG_1st Beta-prop_SPT8 Beta-prop_IFT122_1st MIOS_WD40 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 120342917
NCBI-ProteinID: XP_039267899
LinkDB
Position
Unknown
AA seq 425 aa
MAEKETFDEAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVAKADGKDY
AVHKLILGTHTSDEQNHMIIASVQLPTDDATFDASHYDSERGEFGGFGSVSGKIEIETKI
NHEGEVNRARYMPQRPCIIGTKTPSSDVLVFDITKHPPKPDPCGVCKPDIRLKGHQKEGY
GLSWNPNVTGHLLSASDDHTICLWDVGHKLKENRELDAKSVFTGHTAVVEDVSWHLLHES
LFGSVADDQKLLIWDTRAQSTNKPSHIVEAHTAEVNCLSFNPFSEFILATGSADKTVALW
DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
GPPELLFIHGGHTAKISDFSWNSKEPWVICSVSEDNIMQVWQMAENIYNDEEQEPGCSDL
EQTAG
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggctgaaaaagaaacatttgatgaggcagtggaagaaagagttatcaatgaagaatat
aagatatggaaaaagaacacaccatttttgtatgatctggtaatgacacatgcattagaa
tggccaagtctcacagttcaatggcttcctgatgtagcaaaagcagatgggaaagactat
gctgttcataagctcattttggggacacatacctcagatgaacaaaatcacatgatcatt
gcgagcgttcagcttcccacagatgatgctacatttgatgcatctcattatgatagtgaa
agaggggaatttggtggttttggttcagttagtgggaaaattgagatagaaacaaaaatt
aaccacgaaggagaggtcaatagagctcgttacatgcctcagaggccgtgtatcatcggc
acaaagacaccaagtagcgatgtcctagtcttcgatatcaccaaacatccacctaaacca
gatccatgtggagtttgcaaacctgatattcgtttaaaaggtcatcagaaagagggctat
ggcttatcttggaatccaaatgtaactggtcacttgttgagtgcttcagatgatcacact
atatgtctgtgggacgtgggtcacaaattaaaagaaaatcgtgagctcgatgctaaatca
gtatttactggtcacactgctgtagtagaagatgtgtcttggcacctccttcatgaaagt
ctattcggatcggtagcagatgatcagaaattacttatttgggatacaagggcacaaagt
accaataaaccaagtcatatcgttgaggctcacactgccgaagtaaattgtttatcattc
aaccccttcagtgaatttattcttgccactggttcagctgataaaactgttgcattgtgg
gatttgagaaatcttaagctcaagcttcattcatttgaatcacacaaggatgaaatattc
caagttcaatggtcaccacataatgaaactatcctggcatcaagtggaactgatcgcaga
ctcaatgtctgggatctaagtaagattggcgaagaacagtccgcagaagacgcggaggat
ggtcctccagaactactgttcattcatggtggccacacagccaagatctctgatttttcc
tggaactcaaaagaaccatgggtaatatgttctgtgtcagaggataacatcatgcaggtg
tggcagatggctgaaaacatatacaacgatgaagaacaagaacctggatgctccgattta
gagcagacagcgggttga

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