Styela clava (leathery sea squirt): 120342917
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Entry
120342917 CDS
T07291
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03082
ATP-dependent chromatin remodeling
sclv03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120342917
03083 Polycomb repressive complex
120342917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sclv03036
]
120342917
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
120342917
Histone modification proteins
HAT complexes
HATB complex
120342917
HDAC complexes
Sin3A-HDAC complex
120342917
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
120342917
PRC2.2
120342917
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
120342917
Heterochromatin formation proteins
Other heterochromatin formation proteins
120342917
Chromatin remodeling factors
NuRD complex
120342917
NuRF complex
120342917
NuRF complex (fruit fly)
120342917
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
eIF2A
TAF1C_beta-prop
ANAPC4_WD40
NBCH_WD40
Beta-prop_RIG_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
MIOS_WD40
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
120342917
NCBI-ProteinID:
XP_039267899
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MAEKETFDEAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVAKADGKDY
AVHKLILGTHTSDEQNHMIIASVQLPTDDATFDASHYDSERGEFGGFGSVSGKIEIETKI
NHEGEVNRARYMPQRPCIIGTKTPSSDVLVFDITKHPPKPDPCGVCKPDIRLKGHQKEGY
GLSWNPNVTGHLLSASDDHTICLWDVGHKLKENRELDAKSVFTGHTAVVEDVSWHLLHES
LFGSVADDQKLLIWDTRAQSTNKPSHIVEAHTAEVNCLSFNPFSEFILATGSADKTVALW
DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
GPPELLFIHGGHTAKISDFSWNSKEPWVICSVSEDNIMQVWQMAENIYNDEEQEPGCSDL
EQTAG
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaagaaacatttgatgaggcagtggaagaaagagttatcaatgaagaatat
aagatatggaaaaagaacacaccatttttgtatgatctggtaatgacacatgcattagaa
tggccaagtctcacagttcaatggcttcctgatgtagcaaaagcagatgggaaagactat
gctgttcataagctcattttggggacacatacctcagatgaacaaaatcacatgatcatt
gcgagcgttcagcttcccacagatgatgctacatttgatgcatctcattatgatagtgaa
agaggggaatttggtggttttggttcagttagtgggaaaattgagatagaaacaaaaatt
aaccacgaaggagaggtcaatagagctcgttacatgcctcagaggccgtgtatcatcggc
acaaagacaccaagtagcgatgtcctagtcttcgatatcaccaaacatccacctaaacca
gatccatgtggagtttgcaaacctgatattcgtttaaaaggtcatcagaaagagggctat
ggcttatcttggaatccaaatgtaactggtcacttgttgagtgcttcagatgatcacact
atatgtctgtgggacgtgggtcacaaattaaaagaaaatcgtgagctcgatgctaaatca
gtatttactggtcacactgctgtagtagaagatgtgtcttggcacctccttcatgaaagt
ctattcggatcggtagcagatgatcagaaattacttatttgggatacaagggcacaaagt
accaataaaccaagtcatatcgttgaggctcacactgccgaagtaaattgtttatcattc
aaccccttcagtgaatttattcttgccactggttcagctgataaaactgttgcattgtgg
gatttgagaaatcttaagctcaagcttcattcatttgaatcacacaaggatgaaatattc
caagttcaatggtcaccacataatgaaactatcctggcatcaagtggaactgatcgcaga
ctcaatgtctgggatctaagtaagattggcgaagaacagtccgcagaagacgcggaggat
ggtcctccagaactactgttcattcatggtggccacacagccaagatctctgatttttcc
tggaactcaaaagaaccatgggtaatatgttctgtgtcagaggataacatcatgcaggtg
tggcagatggctgaaaacatatacaacgatgaagaacaagaacctggatgctccgattta
gagcagacagcgggttga
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integrated database retrieval system