Styela clava (leathery sea squirt): 120343051
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Entry
120343051 CDS
T07291
Name
(RefSeq) syntaxin-1A-like isoform X1
KO
K04560
syntaxin 1A
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120343051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120343051
Membrane trafficking [BR:
sclv04131
]
SNARE
Syntaxin (Qa)
Stx-PM
120343051
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
MCPsignal
T2SSF
Lzipper-MIP1
DUF5856
WXG100
Holin_2-3
YtxH
COG3_N
DUF7389
RNA_pol_Rpb1_1
DUF1664
Motif
Other DBs
NCBI-GeneID:
120343051
NCBI-ProteinID:
XP_039268060
LinkDB
All DBs
Position
Unknown
AA seq
295 aa
AA seq
DB search
MRDRLEELQRQANFGVEEDEDDEVTVKVEPDHMEEFFGQVEEIRGYIDTISEKVQEVKRK
HSDILSAPQADDKTKEELEELMAEIKRNANKVRGKLKFIEQNIEEGSNSNTASSADLRIK
KTQHSTLSRKFIEVMTDYNTTQNDYRERCKARIQRQLEITGKQVSDNELENMLENSKDGS
PAIFTGGIIIDTQQTKQALNDIEARHNDIIKLENSIKELHDMFMDMAMLVEQQGEMVNQI
EYNVNNAADYVEIAKNETNQAVKYQSKARKKQIFIIVCIIVALIILAIVLAVTLT
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagggaccgactggaggagttacagcgtcaagctaattttggagttgaagaagatgaa
gatgatgaagtcactgtcaaagttgaaccagatcacatggaagaattttttgggcaggtc
gaagaaattcgtggctacattgatacaatatcagagaaagttcaagaagtcaaaagaaaa
cacagtgatattttatcggcaccacaagcagatgacaaaacaaaggaagaattggaggaa
cttatggcggaaatcaaaagaaatgcaaataaagttcgaggcaaattgaagtttattgaa
caaaatattgaagaaggttctaattcaaatacagcttcatcagcggatctgagaattaag
aaaacacagcattcaacattatctaggaaatttattgaagttatgacagattataacact
acgcaaaatgattatcgagaaaggtgcaaagccagaattcagagacaattggaaattact
gggaagcaggtttcagacaacgaattagagaacatgctcgagaacagcaaagatgggagt
cctgctatcttcacgggaggaataatcatagacacccaacaaacgaagcaagcccttaac
gatattgaagcccgacataatgacattatcaaattagaaaacagcataaaagaactacac
gatatgtttatggacatggcaatgcttgtagagcaacagggtgaaatggtaaaccagatt
gaatacaatgtcaataatgccgctgattatgtggaaattgccaaaaatgagacaaatcaa
gctgttaaataccagagcaaagcacgaaagaaacaaatctttatcattgtttgtatcatt
gtagcactgatcatacttgctattgtcctggcagttacattgacgtga
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