Styela clava (leathery sea squirt): 120343091
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Entry
120343091 CDS
T07291
Name
(RefSeq) chromosome partition protein Smc-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03040
Spliceosome
sclv04141
Protein processing in endoplasmic reticulum
sclv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120343091
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120343091
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120343091
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sclv01009
]
120343091
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sclv03041
]
120343091
03009 Ribosome biogenesis [BR:
sclv03009
]
120343091
03110 Chaperones and folding catalysts [BR:
sclv03110
]
120343091
04131 Membrane trafficking [BR:
sclv04131
]
120343091
03051 Proteasome [BR:
sclv03051
]
120343091
03029 Mitochondrial biogenesis [BR:
sclv03029
]
120343091
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sclv04147
]
120343091
Protein phosphatases and associated proteins [BR:
sclv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
120343091
Spliceosome [BR:
sclv03041
]
Complex B
Other components
Prp19 complex
120343091
Complex C
Prp19-CDC5 complex
120343091
Ribosome biogenesis [BR:
sclv03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
120343091
Chaperones and folding catalysts [BR:
sclv03110
]
Heat shock proteins
HSP70 / DNAK
120343091
Membrane trafficking [BR:
sclv04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
120343091
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
120343091
Proteasome [BR:
sclv03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
120343091
Mitochondrial biogenesis [BR:
sclv03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
120343091
Exosome [BR:
sclv04147
]
Exosomal proteins
Proteins found in most exosomes
120343091
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
FGGY_C
Motif
Other DBs
NCBI-GeneID:
120343091
NCBI-ProteinID:
XP_039268132
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MDITLSDAKFNKEKVDEVVLVGGSTRIPKLRKMIQEYFNGKELYKTINPDEAVAHGAAAL
AVDLSTGASSKIKEFTLYDIVPLPLGINVVGDIMSVVVNKNSKIPSKHYKTVTTVADNQT
FIKFSVYQGERTSTMHNKHLGSFSLSGISPAPRRIPRIDVCFDIDSSGILTVTAKDKITG
NKNNLQLEAAKLKLTLEEIELMVQEAEKYKLDDIELRNLADMRIKLETLVFNAKESTMSL
DSQEKLNKGDKYILLNKCESVFHWLNKNKNASKETLFQQQIEFQNCCHPIFIRICRDKKN
ESDNEQKRNDMDTTCFPLIKKKQEEQAKMLKQQKKEEEEYKQLQKAKNDVKGFIKTAESK
VKWQCFEKFVNEKSAILQNCQTFRNWIEENKNATPNDIYDNLKKFRECSENIFEKMEAAI
EMEQHAEFQTDDDMIAQASDERNALEKCAYTIKQSITGSEYKDKLENNVKEEITSGCDRI
LEWLDENQNASVDECTIKRTELDRICLPLDKIKQEEQKKKEEERNLRQEAQDDLIRFINN
AENKAKLKCFEITNAKSAIFQNCQKLRNWVEENQSTKRNDICDKMQEFQKWSEKVFKNME
EAVKAENQKELQLISESKRKLKECADKISEAVSDSKYVEYLSDAELEKINCYCTNTSTLL
EKSSNPSRQELDKRRKSIEKNCYSILVQINNQVQTEMKRKEVELQQELVSLEHFSKKVFD
VTSRLAQTNKIPSEQANSNFAICNKISELIRNGEIKTRKDCETYYGDILEIYQPIKSLEE
EQNMEANKNDYDSRKEALSNGAQPMFDLLDQEKKEAEKDLTSFVEYIKSSASRIQGNDDY
KDSIFNKCDEITKWISNNKETNKKDYDSKKRELRHFSQSLLNMLDREKKEGEKDLIGFVE
YIKSSASRIQGIDDYKDSIFNKCDEITKWISNNKETNKNDYDSKKRELRHFSQSLLNMLD
REKKEGEKDLIGFVEYVKSLTTRIQCNDDYKISVRNKCEEITKWISSNKEPDKNEYDTKK
RELQKFSQSLLDQVDEQKKIAEAKANLSVYVKEIINDLDNDASRGFFLSSNHRNQFYGSC
AEVRNWLKETKNPSLEEIERKTQQLKTKYQASGLRSNRLVQSDWL
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggatattacactatctgacgcaaagtttaataaagaaaaggttgacgaagtcgtattg
gttggtggatcaactcgaattccaaaactgcgaaaaatgatccaagagtatttcaacggc
aaagaactgtataaaaccataaatccggatgaggctgtggcgcatggggctgccgcactt
gctgttgatcttagtactggtgcatcttcaaaaataaaagagtttactctttatgatatt
gtgcctttaccactcggcatcaacgttgttggtgatatcatgtctgtggttgttaacaaa
aattcaaaaattccttctaaacactacaaaacagtcaccactgttgctgataatcaaaca
tttattaaattttcggtttaccaaggcgaaagaacgtctaccatgcacaataaacacttg
ggctccttcagtttatcgggaatttctcctgcaccacgacgaataccccgtatagatgtc
tgctttgatatcgattccagtggaattttaacagttacggcgaaagataaaattactgga
aacaaaaataatttacaactcgaagctgctaaattgaaacttaccctggaagaaatagaa
cttatggtgcaagaggctgaaaaatataaattggatgatattgagctcagaaacctcgca
gacatgagaataaagctggaaactttggttttcaacgcaaaggaatccaccatgtctctt
gattcacaggaaaaattgaacaaaggagataaatatatattattgaataaatgtgaatca
gtttttcattggctaaacaaaaacaagaatgcttcgaaggaaactctctttcaacaacaa
attgaatttcagaattgctgccacccaatattcatacgaatatgtagggataaaaagaat
gaaagtgataacgaacaaaaaagaaatgatatggatacaacttgttttccgctaataaaa
aagaaacaagaagaacaggcgaaaatgttgaaacagcagaaaaaagaagaagaagaatac
aaacaacttcaaaaagcaaagaatgatgtaaaaggcttcatcaaaactgcagagagcaaa
gtcaaatggcagtgcttcgaaaagtttgtcaatgagaaatcagcgattcttcaaaattgt
caaactttcaggaactggatcgaagaaaacaagaacgcaacgccaaatgatatttatgac
aacttgaagaagtttagagaatgtagtgagaacatttttgagaaaatggaggcagcaatt
gagatggaacagcatgcagaatttcagacggatgatgatatgatagcgcaagcaagtgac
gagcgcaatgctctcgaaaaatgtgcatacaccatcaaacaatccataacgggttcagag
tataaagacaaactagaaaacaatgttaaagaagaaatcacttctggatgcgacagaatt
ttagagtggctggatgaaaatcagaatgcaagtgtcgatgaatgcacaatcaaaagaact
gaattggatagaatttgtcttccactagacaaaataaaacaagaagaacagaaaaagaaa
gaagaagaacgcaatctacgccaggaagcccaggatgatttgatacgttttatcaataat
gctgagaacaaagccaagctcaagtgttttgagattaccaatgcaaaatcggctattttt
caaaattgtcaaaaactgaggaactgggtggaggaaaaccagagcacaaagagaaatgat
atttgtgataaaatgcaggagtttcaaaaatggagtgagaaagtttttaagaacatggaa
gaagccgtaaaggcagaaaatcaaaaagaacttcaactgatttctgaatcaaaacgaaaa
cttaaggaatgtgctgacaaaatatctgaagctgtatctgattcaaaatacgttgaatat
ttaagcgacgcagaactagagaaaataaattgttactgtactaatacatctacgttgctt
gagaaatcatcaaatccgagtagacaagagttggataaaaggagaaagtcaattgaaaaa
aactgctattcaattttagttcaaataaacaaccaggtacaaacagagatgaaacgcaaa
gaggtagaactgcaacaggagttggtttcacttgaacattttagcaagaaagtctttgat
gtcacatctcgattggcccaaacaaataaaataccttcagaacaagcaaattccaatttt
gcaatctgcaataagatatcagaactaataaggaacggtgagataaaaaccagaaaagat
tgtgaaacgtattatggagacattctcgaaatttatcaaccaataaagagcttggaagaa
gaacaaaatatggaagcgaataaaaatgattacgattcaagaaaggaagcattgagtaat
ggtgctcaacctatgtttgacttgttggatcaagaaaaaaaagaagctgaaaaagacctg
acaagcttcgtagaatatatcaaaagttcggcttcccgtattcaaggtaatgatgactat
aaagattcgattttcaacaagtgcgatgaaataaccaaatggatctcaaataataaggaa
acaaacaaaaaagattatgattcaaaaaagagagaattgcgacacttttcccaatcgttg
cttaacatgttggatcgtgagaaaaaggaaggtgaaaaagacctgatcggcttcgtagaa
tatatcaaaagttcggcttcccgtattcaaggtattgatgactataaagattcgattttc
aacaagtgcgatgaaataaccaaatggatctcaaataataaggaaacaaacaaaaatgat
tatgattcaaaaaagagagaattgcgacacttttcccaatcgttgcttaacatgttggat
cgtgagaaaaaggaaggtgaaaaagacctgatcggctttgtggaatatgtcaagagtttg
acaacccgtattcaatgtaatgatgattataaaatttccgttcgcaacaagtgtgaagaa
ataaccaagtggatttcatctaataaggaaccagacaaaaatgaatacgatacaaaaaag
agagaattgcaaaagttttctcaatcgttgcttgaccaggtggatgaacaaaaaaagatt
gccgaggccaaagctaatctttcagtgtatgtgaaagaaataataaatgacctagacaat
gatgcgagcaggggattttttctttcatctaatcatcgaaatcagttttacgggtcttgc
gctgaagttagaaactggcttaaagaaactaagaatccgtcattggaagagatagaaaga
aaaacacagcagttgaaaaccaaatatcaagctagtggtttgcgaagcaatagactggtc
caatctgactggttataa
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integrated database retrieval system
