Styela clava (leathery sea squirt): 120343100
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Entry
120343100 CDS
T07291
Name
(RefSeq) RNA-binding protein Musashi homolog 2-like
KO
K14411
RNA-binding protein Musashi
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120343100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120343100
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120343100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
NTP_transferase
Motif
Other DBs
NCBI-GeneID:
120343100
NCBI-ProteinID:
XP_039268144
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MDQESNVGAQEHGIDETPDPGKMFVGGLNIQTTAEGLKEYFSKFGEVADTIVMKDPITTS
SRGFGFVTFQDPKSVEKVLESSPHGLDQKTIDPKVAVPKRKQSKMVTRTKKIFVGGLSAD
TVVDDLKKYFSQYGQVEDAMLMFDKVTHRHRGFGFVTFDNEESVEKVCEIHFHEIKTKMV
ECKKAQPKEVMMPTMTRPLSRPRAATVQYIDPTTAMCLGYQQFYPRTAPTATIAYPTAYA
AYPGAGVGGPTLAYTADPNTLARLGMAPMTAGTFAVAAAAQAQQARIETLGSPLATSGQA
LQQLVHPGAELKRELTAPVFTTYAQSTLPTPTHNGTVRAAAFNGSPSPLDVYSHVAATHV
AAPHEAALGAYIAQAASPQPGSAAFPGGIPLPSQCHMLTQLSYQ
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagaatcaaatgtaggagcgcaagaacatggcattgatgagactcctgatcct
gggaaaatgttcgttggtggattgaatattcaaacgacagcagagggacttaaagagtac
tttagcaagtttggagaagttgccgacacaatcgtaatgaaagatcctataacaactagt
tcaagaggattcggtttcgtcacatttcaagatccaaaaagtgttgaaaaagtcttggag
agcagtccacacggccttgatcagaaaacgattgatccaaaggtcgcagttccaaaaaga
aagcaatcaaagatggtgaccaggacaaagaaaatattcgtcggtggtttgtccgcagac
accgtggtggatgatctgaagaagtatttttcacaatatgggcaggttgaagacgcaatg
ctaatgttcgataaagtcactcatcggcatagaggatttggtttcgtcacattcgacaat
gaagaatcagtggaaaaagtttgtgaaatacattttcacgaaatcaaaacaaagatggtg
gaatgcaaaaaggctcagccgaaagaagttatgatgccaacaatgaccagaccattaagt
agacccagagctgcaaccgtgcaatatattgaccctactacagctatgtgcctgggttat
caacaattttatccacgaactgctccgacagctacaatagcttatcctactgcatacgca
gcctatcctggagctggtgttggaggtccgacgctggcgtacacagctgatccaaatacc
ctggccaggctaggaatggctccgatgacggccggaactttcgcagttgcagctgctgct
caagcacaacaggcacggattgaaacactgggatcgccacttgcaacttctggacaagct
ctacaacagttagttcacccaggagctgaactaaagagagaattgacagctccagttttt
acaacgtacgcgcaatcaacattgcctacaccaacacataacggcacagtaagagcggcg
gcattcaatggtagccccagtccactggatgtttactcgcatgttgctgcaacgcatgta
gcggcgccacacgaggccgctcttggtgcgtacattgcacaagctgcatctccgcaaccg
ggaagtgctgcgtttccaggaggcattccattgccatcacaatgtcatatgctcactcaa
ctcagctatcagtag
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