Styela clava (leathery sea squirt): 120343128
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Entry
120343128 CDS
T07291
Name
(RefSeq) histone-binding protein RBBP4-like
KO
K10752
histone-binding protein RBBP4
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03082
ATP-dependent chromatin remodeling
sclv03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120343128
03083 Polycomb repressive complex
120343128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sclv03036
]
120343128
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
120343128
Histone modification proteins
HAT complexes
HATB complex
120343128
HDAC complexes
Sin3A-HDAC complex
120343128
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
120343128
PRC2.2
120343128
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
120343128
Heterochromatin formation proteins
Other heterochromatin formation proteins
120343128
Chromatin remodeling factors
NuRD complex
120343128
NuRF complex
120343128
NuRF complex (fruit fly)
120343128
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD_LRWD1
ANAPC4_WD40
Beta-prop_RIG_1st
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
NBCH_WD40
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
120343128
NCBI-ProteinID:
XP_039268179
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MAQTQSASSSAAIGGDEALEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDV
TRPENKEYTVHRVILGTHTTDEQNHLIIGSVQLPTDDGHFDTSNYDGERGEFGGFGSVAG
KIEIEIKINHEGEVNRARHMPQNPCVIATKTPSCDVLIFDYTKHPSKPNPNGESCPDLRL
KGHLKEGYGLSWNNQVAGHLLSASDDHTVCLWDVNSAPKDKKTLDAKRIFRGHSAVVEDV
AWHLLHESLFGSVADDQSLMIWDTRSTSSDKPSHTVSAHAAEVNCLSFNPYSEFILATGS
ADKTVALWDLRNLKLKLHSFDSHKDEIFQVQWSPHTETILASSGTDRRLNVWDLSKIGEE
QSNEDAEDGPPELLFVHGGHTSKISDFSWNPNEPWTICSVSEDNIMQVWQMAENIYNEDQ
ENGSAGVELSQVES
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaacacaaagtgcctctagctcagccgccataggtggtgatgaagcattggaa
gagagagtgataaatgaagaatataaaatatggaagaaaaacactccttttttgtatgac
cttgtaatgactcatgccttagaatggccgagtcttacagttcaatggttgcctgatgtc
accagacctgagaataaagaatacactgtacatcgtgttattcttggtactcatactact
gatgaacagaatcatctgattattggtagtgtacaacttcctacagacgatgggcatttt
gatacctcaaactatgatggtgaaaggggtgaattcggtggatttggatctgttgctgga
aaaatcgaaattgagatcaaaatcaatcatgaaggagaagtcaatagagcaaggcacatg
ccacaaaatccttgtgtaattgcaacaaaaactccctcctgtgatgtcctcatttttgac
tataccaagcaccccagcaagccaaatcctaatggtgaaagctgccctgatcttcgctta
aaaggtcatttgaaagagggttatggtttgtcatggaataaccaagttgctggtcatttg
ctaagtgcatcagatgatcacactgtttgcctttgggacgtcaattctgcacctaaagac
aaaaagaccctcgatgctaagaggatcttcagaggccattctgctgtggttgaagatgta
gcatggcatttattgcatgaaagtttgtttggttccgtcgctgatgatcaaagtttgatg
atttgggacacaagatctactagttctgataaaccaagtcacactgtcagcgctcatgca
gctgaagtcaactgtctttcatttaacccatatagtgagttcattttagcaactggatca
gctgataaaactgtcgcactatgggatttgcgaaatctaaaactcaagttacactcattt
gacagtcacaaagatgaaattttccaagttcaatggtcacctcatactgaaacgatactt
gcgtcgagtggaacagacagacgattgaacgtttgggatctcagtaaaattggagaagaa
caatcgaatgaagatgcagaggacggacctcctgaactgctttttgttcacggcggacat
acttctaaaatatcagacttctcttggaatccaaatgaaccttggacaatttgttcagtg
tcagaagataacattatgcaagtgtggcagatggctgaaaacatttacaatgaagatcaa
gagaacggatcagctggtgttgaactcagtcaagttgaatcttga
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integrated database retrieval system
